RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SFPQP23246 707 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 RBM25P49756 843 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 SP4Q02446 784 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 PRKG1Q13976 671 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 ZNF772Q68DY9 489 aaPredicted RBP11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 CCDC91Q7Z6B0 441 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 PSMD1Q99460 953 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 YTHDC2Q9H6S0 1430 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 MMRN2Q9H8L6 949 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 ARHGEF10LQ9HCE6 1279 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 HOMER2Q9NSB8 354 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 PAG1Q9NWQ8 432 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 CCDC117Q8IWD4 279 aaPredicted RBP11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 HIBADHP31937 336 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 ARHGAP45Q92619 1136 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 BRF1Q92994 677 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 POLKQ9UBT6 870 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 SHROOM2Q13796 1616 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 DISP3Q9P2K9 1392 aa11.19□□□□□ -0.62
CLTCL1-211ENST00000621271 TOP1P11387 765 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 GOLGA6L7A0A1B0GV03 622 aa11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 TSHZ3Q63HK5 1081 aa11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 TRPC5Q9UL62 973 aaPredicted RBP11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 XRCC6P12956 609 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 KIF22Q14807 665 aa11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 LUZP1Q86V48 1076 aa11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 MEIS3Q99687 375 aa11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 RTL9Q8NET4 1388 aa11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 GRIPAP1Q4V328 841 aa11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 ARHGAP27Q6ZUM4 889 aa11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 RMND1Q9NWS8 449 aa11.18□□□□□ -0.62
CLTCL1-211ENST00000621271 PPFIA3O75145 1194 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 EIF3JO75822 258 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 CALML3P27482 149 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 RXRBP28702 533 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 QTRT2Q9H974 415 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 RALGAPBQ86X10 1494 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 IGHDP01880 384 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 HCLS1P14317 486 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 DNA2P51530 1060 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 KLHL40Q2TBA0 621 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 CCDC102BQ68D86 513 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 SMCR8Q8TEV9 937 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 PPIP5K2O43314 1243 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 FAM193AP78312 1265 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 CWF19L2Q2TBE0 894 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 TBC1D5Q92609 795 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 FAM89AQ96GI7 184 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 ALG1Q9BT22 464 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 ZBTB21Q9ULJ3 1066 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 MAP3K19Q56UN5 1328 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 GNA11P29992 359 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 ZMYND15Q9H091 742 aa11.17□□□□□ -0.62
CLTCL1-211ENST00000621271 ZSCAN12O43309 604 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 GJB2P29033 226 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 STAT6P42226 847 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 CCDC183Q5T5S1 534 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 KRT79Q5XKE5 535 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 TRIM47Q96LD4 638 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 TMCO5BA8MYB1 307 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 DYNC1I1O14576 645 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 RNF113AO15541 343 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 KIF5CO60282 957 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 LPXNO60711 386 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 LMAN1P49257 510 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 DLGAP5Q15398 846 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 C8orf34Q49A92 452 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 ZNF790Q6PG37 636 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 DDX21Q9NR30 783 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 ADCY10Q96PN6 1610 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 IRX3P78415 501 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 ATP8B2P98198 1209 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 MSL1Q68DK7 614 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 CPLX3Q8WVH0 158 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 PUS7Q96PZ0 661 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 ABCC1P33527 1531 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 PAFAH1B1P43034 410 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 TAOK3Q9H2K8 898 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 PA2G4Q9UQ80 394 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 CSADQ9Y600 493 aa11.16□□□□□ -0.62
CLTCL1-211ENST00000621271 PDE8AO60658 829 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 FAM13AO94988 1023 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 CBX1P83916 185 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 WDR66Q8TBY9 1149 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 SPAG5Q96R06 1193 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 SAP30BPQ9UHR5 308 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 PARP1P09874 1014 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 ITGA6P23229 1130 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 MRPS9P82933 396 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 USP48Q86UV5 1035 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 CERS3Q8IU89 383 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 PLBD2Q8NHP8 589 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 PRDM10Q9NQV6 1147 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 SBNO2Q9Y2G9 1366 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 NOP56O00567 594 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 NOP2P46087 812 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 BMP2KLQ5H9B9 411 aa11.15□□□□□ -0.62
CLTCL1-211ENST00000621271 C8orf58Q8NAV2 365 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms