RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 FAM83GA6ND36 823 aa14.09□□□□□ -0.15
MATR3-227ENST00000618441 OTUD6BQ8N6M0 293 aa14.09□□□□□ -0.15
MATR3-227ENST00000618441 MIS18AQ9NYP9 233 aa14.09□□□□□ -0.15
MATR3-227ENST00000618441 ZRANB1Q9UGI0 708 aa14.09□□□□□ -0.15
MATR3-227ENST00000618441 ELF1P32519 619 aa14.09□□□□□ -0.15
MATR3-227ENST00000618441 SCRN1Q12765 414 aa14.09□□□□□ -0.15
MATR3-227ENST00000618441 BCAS4Q8TDM0 211 aa14.09□□□□□ -0.15
MATR3-227ENST00000618441 E9PCH4 1651 aa14.08□□□□□ -0.15
MATR3-227ENST00000618441 CCP110O43303 1012 aa14.08□□□□□ -0.15
MATR3-227ENST00000618441 ATP8B1O43520 1251 aa14.08□□□□□ -0.15
MATR3-227ENST00000618441 EIF2S2P20042 333 aaKnown RBP14.08□□□□□ -0.15
MATR3-227ENST00000618441 CPLX3Q8WVH0 158 aa14.08□□□□□ -0.15
MATR3-227ENST00000618441 IRX2Q9BZI1 471 aaPredicted RBP14.08□□□□□ -0.15
MATR3-227ENST00000618441 MARCH6O60337 910 aa14.08□□□□□ -0.16
MATR3-227ENST00000618441 NEDD9Q14511 834 aa14.08□□□□□ -0.16
MATR3-227ENST00000618441 AP1ARQ63HQ0 302 aa14.08□□□□□ -0.16
MATR3-227ENST00000618441 FSIP1Q8NA03 581 aa14.08□□□□□ -0.16
MATR3-227ENST00000618441 RGS12O14924 1447 aa14.08□□□□□ -0.16
MATR3-227ENST00000618441 ZSCAN12O43309 604 aa14.08□□□□□ -0.16
MATR3-227ENST00000618441 NBPF6Q5VWK0 638 aa14.08□□□□□ -0.16
MATR3-227ENST00000618441 NBPF4Q96M43 638 aa14.08□□□□□ -0.16
MATR3-227ENST00000618441 ZEB2O60315 1214 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 RNF40O75150 1001 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 CCDC82Q8N4S0 544 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 CLIC6Q96NY7 704 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 EHD4Q9H223 541 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 SCAF11Q99590 1463 aaKnown RBP14.07□□□□□ -0.16
MATR3-227ENST00000618441 CCDC189A1A4V9 331 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 TOP1P11387 765 aaKnown RBP14.07□□□□□ -0.16
MATR3-227ENST00000618441 GSCP56915 257 aaPredicted RBP14.07□□□□□ -0.16
MATR3-227ENST00000618441 MBIPQ9NS73 344 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 TERF2IPQ9NYB0 399 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 RAB11FIP3O75154 756 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 TFRCP02786 760 aaKnown RBP14.07□□□□□ -0.16
MATR3-227ENST00000618441 ME3Q16798 604 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 SWT1Q5T5J6 900 aaKnown RBP14.07□□□□□ -0.16
MATR3-227ENST00000618441 STK11IPQ8N1F8 1099 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 RBM28Q9NW13 759 aaKnown RBP14.07□□□□□ -0.16
MATR3-227ENST00000618441 PNMA2Q9UL42 364 aa14.07□□□□□ -0.16
MATR3-227ENST00000618441 EXOC5O00471 708 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 CAND2O75155 1236 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 ZKSCAN1P17029 563 aaPredicted RBP14.06□□□□□ -0.16
MATR3-227ENST00000618441 TXLNAP40222 546 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 CCDC93Q567U6 631 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 TRIM6Q9C030 488 aaPredicted RBP14.06□□□□□ -0.16
MATR3-227ENST00000618441 PDCP20941 246 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 IQCB1Q15051 598 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 PSD3Q9NYI0 1048 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 ZMYND10O75800 440 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 PGBD1Q96JS3 809 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 CRACR2AQ9BSW2 395 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 EID1Q9Y6B2 187 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 CLTCL1P53675 1640 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 ENO4A6NNW6 628 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 GNAI1P63096 354 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 ADCK5Q3MIX3 580 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 PARP3Q9Y6F1 533 aa14.06□□□□□ -0.16
MATR3-227ENST00000618441 KIDINS220Q9ULH0 1771 aa14.05□□□□□ -0.16
MATR3-227ENST00000618441 PLXNC1O60486 1568 aa14.05□□□□□ -0.16
MATR3-227ENST00000618441 CDC25BP30305 580 aa14.05□□□□□ -0.16
MATR3-227ENST00000618441 UBASH3AP57075 661 aa14.05□□□□□ -0.16
MATR3-227ENST00000618441 CASP8Q14790 479 aa14.05□□□□□ -0.16
MATR3-227ENST00000618441 NOC3LQ8WTT2 800 aaKnown RBP14.05□□□□□ -0.16
MATR3-227ENST00000618441 CABS1Q96KC9 395 aa14.05□□□□□ -0.16
MATR3-227ENST00000618441 PSDA5PKW4 1024 aaPredicted RBP14.05□□□□□ -0.16
MATR3-227ENST00000618441 PES1O00541 588 aaKnown RBP14.05□□□□□ -0.16
MATR3-227ENST00000618441 SF3A3Q12874 501 aaKnown RBP eCLIP14.05□□□□□ -0.16
MATR3-227ENST00000618441 MAP9Q49MG5 647 aa14.05□□□□□ -0.16
MATR3-227ENST00000618441 HDGFL2Q7Z4V5 671 aaPredicted RBP14.05□□□□□ -0.16
MATR3-227ENST00000618441 PPP1R12BO60237 982 aaPredicted RBP14.05□□□□□ -0.16
MATR3-227ENST00000618441 RBM5P52756 815 aaKnown RBP eCLIP14.05□□□□□ -0.16
MATR3-227ENST00000618441 RABGGTAQ92696 567 aa14.05□□□□□ -0.16
MATR3-227ENST00000618441 MIEF2Q96C03 454 aa14.05□□□□□ -0.16
MATR3-227ENST00000618441 LTV1Q96GA3 475 aaPredicted RBP14.05□□□□□ -0.16
MATR3-227ENST00000618441 CCDC151A5D8V7 595 aa14.04□□□□□ -0.16
MATR3-227ENST00000618441 EIF4E1BA6NMX2 242 aaKnown RBP14.04□□□□□ -0.16
MATR3-227ENST00000618441 SLC4A2P04920 1241 aa14.04□□□□□ -0.16
MATR3-227ENST00000618441 PSMD2Q13200 908 aa14.04□□□□□ -0.16
MATR3-227ENST00000618441 MEX3CQ5U5Q3 659 aaKnown RBP14.04□□□□□ -0.16
MATR3-227ENST00000618441 RIPOR2Q9Y4F9 1068 aa14.04□□□□□ -0.16
MATR3-227ENST00000618441 CFAP74Q9C0B2 1584 aa14.04□□□□□ -0.16
MATR3-227ENST00000618441 A0A1B0GVL5 298 aa14.04□□□□□ -0.16
MATR3-227ENST00000618441 RRS1Q15050 365 aaKnown RBP14.04□□□□□ -0.16
MATR3-227ENST00000618441 FMNL3Q8IVF7 1028 aa14.04□□□□□ -0.16
MATR3-227ENST00000618441 G3BP2Q9UN86 482 aaKnown RBP14.04□□□□□ -0.16
MATR3-227ENST00000618441 AP1G2O75843 785 aa14.04□□□□□ -0.16
MATR3-227ENST00000618441 ATP1A3P13637 1013 aa14.04□□□□□ -0.16
MATR3-227ENST00000618441 MLH3Q9UHC1 1453 aa14.04□□□□□ -0.16
MATR3-227ENST00000618441 SURF6O75683 361 aaKnown RBP14.03□□□□□ -0.16
MATR3-227ENST00000618441 HSPA4P34932 840 aa14.03□□□□□ -0.16
MATR3-227ENST00000618441 VPS53Q5VIR6 699 aa14.03□□□□□ -0.16
MATR3-227ENST00000618441 ANKRD18AQ8IVF6 992 aa14.03□□□□□ -0.16
MATR3-227ENST00000618441 CEP120Q8N960 986 aa14.03□□□□□ -0.16
MATR3-227ENST00000618441 NDUFAB1O14561 156 aa14.03□□□□□ -0.16
MATR3-227ENST00000618441 JAK2O60674 1132 aa14.03□□□□□ -0.16
MATR3-227ENST00000618441 ADKP55263 362 aaKnown RBP14.03□□□□□ -0.16
MATR3-227ENST00000618441 PPP2R2CQ9Y2T4 447 aa14.03□□□□□ -0.16
MATR3-227ENST00000618441 IQGAP3Q86VI3 1631 aa14.03□□□□□ -0.16
MATR3-227ENST00000618441 BRD3Q15059 726 aa14.03□□□□□ -0.16
MATR3-227ENST00000618441 PHACTR3Q96KR7 559 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms