RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 LMOD1P29536 600 aaPredicted RBP11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 ZAP70P43403 619 aa11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 TMEM266Q2M3C6 531 aa11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 KRT27Q7Z3Y8 459 aa11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 ARHGEF5Q12774 1597 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 MARCKSP29966 332 aaPredicted RBP11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 HSP90AA4PQ58FG1 418 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 CREB3L3Q68CJ9 461 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 FAM43AQ8N2R8 423 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 NF2P35240 595 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 SMARCE1Q969G3 411 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 RAB34Q9BZG1 259 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 TTC41PQ6P2S7 1318 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 PLA2R1Q13018 1463 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 TNNI2P48788 182 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 NAPAP54920 295 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 SKIDA1Q1XH10 827 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 KIAA0825Q8IV33 1275 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 MAPKAPK5Q8IW41 473 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 TCP11L1Q9NUJ3 509 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 DACH1Q9UI36 760 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
SMARCA1-205ENST00000617310 USP6P35125 1406 aa11.71□□□□□ -0.53
SMARCA1-205ENST00000617310 KDM5DQ9BY66 1539 aa11.71□□□□□ -0.53
SMARCA1-205ENST00000617310 LRRC24Q50LG9 513 aa11.71□□□□□ -0.53
SMARCA1-205ENST00000617310 GPAA1O43292 621 aa11.71□□□□□ -0.54
SMARCA1-205ENST00000617310 SRP68Q9UHB9 627 aaKnown RBP11.71□□□□□ -0.54
SMARCA1-205ENST00000617310 CCDC171Q6TFL3 1326 aa11.71□□□□□ -0.54
SMARCA1-205ENST00000617310 TCERG1LQ5VWI1 586 aa11.71□□□□□ -0.54
SMARCA1-205ENST00000617310 CCDC12Q8WUD4 166 aaPredicted RBP11.71□□□□□ -0.54
SMARCA1-205ENST00000617310 UIMC1Q96RL1 719 aa11.71□□□□□ -0.54
SMARCA1-205ENST00000617310 BABAM1Q9NWV8 329 aa11.71□□□□□ -0.54
SMARCA1-205ENST00000617310 AK2P54819 239 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 PIGBQ92521 554 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 CNNM2Q9H8M5 875 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 PKD2L1Q9P0L9 805 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 RBM27Q9P2N5 1060 aaKnown RBP11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 PLCG2P16885 1265 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 EAPPQ56P03 285 aaPredicted RBP11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 CPLX3Q8WVH0 158 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 LPIN2Q92539 896 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 VTI1AQ96AJ9 217 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 MYL10Q9BUA6 226 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 GPCPD1Q9NPB8 672 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 IGSF1Q8N6C5 1336 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 SCNN1DP51172 638 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 MFSD14BQ5SR56 506 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 PUS3Q9BZE2 481 aaKnown RBP11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 CCDC39Q9UFE4 941 aa11.7□□□□□ -0.54
SMARCA1-205ENST00000617310 GREM2Q9H772 168 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 GRPEL1Q9HAV7 217 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 SETD1BQ9UPS6 1966 aaKnown RBP11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 AFMP43652 599 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 BCAMP50895 628 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 CTSWP56202 376 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 C2CD5Q86YS7 1000 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 hCG_1642624A0A1W2PR95 340 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 CYP27B1O15528 508 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 SSR1P43307 286 aaKnown RBP11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 RBM25P49756 843 aaKnown RBP11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 TTC6Q86TZ1 520 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 UNC5CLQ8IV45 518 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 KRI1Q8N9T8 703 aaKnown RBP11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 EAF2Q96CJ1 260 aaPredicted RBP11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 NCOA5Q9HCD5 579 aaKnown RBP11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 ARHGAP27Q6ZUM4 889 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
SMARCA1-205ENST00000617310 AFF2P51816 1311 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 SPATA31A3Q5VYP0 1347 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 BAG4O95429 457 aaKnown RBP11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 DNA2P51530 1060 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 C8orf34Q49A92 452 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 SEC31BQ9NQW1 1179 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 FCHSD1Q86WN1 690 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 CPXCR1Q8N123 301 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 ZBTB21Q9ULJ3 1066 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 TTF2Q9UNY4 1162 aaKnown RBP11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 HECW2Q9P2P5 1572 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 PREX2Q70Z35 1606 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 CALM1P0DP23 149 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 CALM2P0DP24 149 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 CALM3P0DP25 149 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 PPP4R3AQ6IN85 833 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 NIM1KQ8IY84 436 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 TMTC2Q8N394 836 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 PLIN2Q99541 437 aa11.68□□□□□ -0.54
SMARCA1-205ENST00000617310 ZNF772Q68DY9 489 aaPredicted RBP11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 TGFBRAP1Q8WUH2 860 aa11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 SEC62Q99442 399 aaKnown RBP11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 ZNF532Q9HCE3 1301 aa11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 DHX32Q7L7V1 743 aaKnown RBP11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 SPATA5Q8NB90 893 aa11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 ZNF526Q8TF50 670 aaPredicted RBP11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 APPBP2Q92624 585 aa11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 CALML4Q96GE6 196 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms