RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 GNPTABQ3T906 1256 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 TRIM47Q96LD4 638 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 ADD3Q9UEY8 706 aaKnown RBP3.9□□□□□ -1.78
LPP-220ENST00000617246 ALKQ9UM73 1620 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 CCDC14Q49A88 953 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 FAM47CQ5HY64 1035 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 EDEM3Q9BZQ6 932 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 DEF6Q9H4E7 631 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 RNF41Q9H4P4 317 aaPredicted RBP3.9□□□□□ -1.78
LPP-220ENST00000617246 SEPT11Q9NVA2 429 aaKnown RBP3.9□□□□□ -1.78
LPP-220ENST00000617246 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.9□□□□□ -1.78
LPP-220ENST00000617246 CNPY2Q9Y2B0 182 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 ANKRD36CQ5JPF3 1778 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 R3HDM1Q15032 1099 aaKnown RBP3.9□□□□□ -1.78
LPP-220ENST00000617246 DPP9Q86TI2 863 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 MROH1Q8NDA8 1641 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 MTFR1LQ9H019 292 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 CFAP36Q96G28 342 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 MEI4A8MW99 385 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 GTF2F1P35269 517 aaKnown RBP eCLIP3.9□□□□□ -1.79
LPP-220ENST00000617246 SEPT12Q8IYM1 358 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 SIRT1Q96EB6 747 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 TNNQ9UQP3 1299 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 C5P01031 1676 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 PLEKHG3A1L390 1219 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 UQCRFS1P1P0C7P4 283 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 LARP1Q6PKG0 1096 aaKnown RBP3.9□□□□□ -1.79
LPP-220ENST00000617246 FASTKD5Q7L8L6 764 aaKnown RBP3.9□□□□□ -1.79
LPP-220ENST00000617246 TBC1D22AQ8WUA7 517 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 NAP1L4Q99733 375 aaKnown RBP3.9□□□□□ -1.79
LPP-220ENST00000617246 AAASQ9NRG9 546 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 GGA1Q9UJY5 639 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 ZBED9Q6R2W3 1325 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 CALM1P0DP23 149 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 CALM2P0DP24 149 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 CALM3P0DP25 149 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 WNK3Q9BYP7 1800 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 PSDA5PKW4 1024 aaPredicted RBP3.9□□□□□ -1.79
LPP-220ENST00000617246 CETN2P41208 172 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 UBAC1Q9BSL1 405 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 TANGO6Q9C0B7 1094 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 TMEM2Q9UHN6 1383 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 FBXW10Q5XX13 1052 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 APOBRQ0VD83 1088 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 SLC9C1Q4G0N8 1177 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 CFAP70Q5T0N1 1121 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 WWC3Q9ULE0 1092 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 XPOTO43592 962 aaKnown RBP3.9□□□□□ -1.79
LPP-220ENST00000617246 ST18O60284 1047 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 PTPAQ15257 358 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 ZNF354CQ86Y25 554 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 PIDD1Q9HB75 910 aa3.9□□□□□ -1.79
LPP-220ENST00000617246 GPATCH4Q5T3I0 446 aaKnown RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 ATXN3P54252 364 aaPredicted RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 GOLGA8FQ08AF8 430 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 GOLGA8DPQ0D2H9 430 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 SKA1Q96BD8 255 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 IMPG2Q9BZV3 1241 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 NEXMIFQ5QGS0 1516 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 KCNQ2O43526 872 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 HSPA1LP34931 641 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 KAT6AQ92794 2004 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 RGPD5Q99666 1765 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 CKAP2LQ8IYA6 745 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 RPS6KC1Q96S38 1066 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 SYCE3A1L190 88 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 ZBED4O75132 1171 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 CARMIL3Q8ND23 1372 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 DNM2P50570 870 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 DDX19BQ9UMR2 479 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 MVPQ14764 893 aaKnown RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 ZNF449Q6P9G9 518 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 PTPRCP08575 1304 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 KCTD2Q14681 263 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 RGL2O15211 777 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 SSTR3P32745 418 aaPredicted RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 CTCFLQ8NI51 663 aaPredicted RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 KATNAL1Q9BW62 490 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 ZNF215Q9UL58 517 aaPredicted RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 EIF3CLB5ME19 914 aaKnown RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 FCGRTP55899 365 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 AMPD2Q01433 879 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 HAUS6Q7Z4H7 955 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 GJD4Q96KN9 370 aaPredicted RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 ZNF157P51786 506 aaPredicted RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 TTLL6Q8N841 843 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 ZSCAN20P17040 1043 aaPredicted RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 LRRC27Q9C0I9 530 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 CACYBPQ9HB71 228 aaKnown RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 TIAM2Q8IVF5 1701 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 ARHGEF28Q8N1W1 1705 aaKnown RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 DPYSL4O14531 572 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 SNX16P57768 344 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 CCDC26Q8TAB7 109 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 KIF2CQ99661 725 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 LMCD1Q9NZU5 365 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 CTCFP49711 727 aaPredicted RBP3.89□□□□□ -1.79
LPP-220ENST00000617246 CCDC148Q8NFR7 591 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 IGF1RP08069 1367 aa3.89□□□□□ -1.79
LPP-220ENST00000617246 ASXL1Q8IXJ9 1541 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms