RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 WWC3Q9ULE0 1092 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 ABCC12Q96J65 1359 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 TRAK2O60296 914 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 KDM4AO75164 1064 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 HSP90B1P14625 803 aaKnown RBP4.11□□□□□ -1.75
LIG4-205ENST00000614526 RASGRF1Q13972 1273 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 PUM3Q15397 648 aaKnown RBP4.11□□□□□ -1.75
LIG4-205ENST00000614526 ME3Q16798 604 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 RNF20Q5VTR2 975 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 VPS37DQ86XT2 251 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 MIGA1Q8NAN2 632 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 TTC14Q96N46 770 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 NLRP3Q96P20 1036 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 INCENPQ9NQS7 918 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 HMG20BQ9P0W2 317 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 DENND2AQ9ULE3 1009 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 ZDHHC9Q9Y397 364 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 NUP188Q5SRE5 1749 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 SRCAPQ6ZRS2 3230 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 RIC1Q4ADV7 1423 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 SLC5A1P13866 664 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 NFIXQ14938 502 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 ZMYM1Q5SVZ6 1142 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 TPTE2Q6XPS3 522 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 STOX1Q6ZVD7 989 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 LPIN2Q92539 896 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 GPHNQ9NQX3 736 aaPredicted RBP4.1□□□□□ -1.75
LIG4-205ENST00000614526 TPCN1Q9ULQ1 816 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 LIMCH1Q9UPQ0 1083 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 TJP1Q07157 1748 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 MED23Q9ULK4 1368 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.1□□□□□ -1.75
LIG4-205ENST00000614526 PRPF40AO75400 957 aaKnown RBP4.1□□□□□ -1.75
LIG4-205ENST00000614526 BAG4O95429 457 aaKnown RBP4.1□□□□□ -1.75
LIG4-205ENST00000614526 APBA3O96018 575 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 CHAF1AQ13111 956 aaPredicted RBP4.1□□□□□ -1.75
LIG4-205ENST00000614526 SLC4A8Q2Y0W8 1093 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 CLEC4GQ6UXB4 293 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 MAGEB6Q8N7X4 407 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 BRF1Q92994 677 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 GBP4Q96PP9 640 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 NEK1Q96PY6 1258 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 CDC5LQ99459 802 aaKnown RBP4.1□□□□□ -1.75
LIG4-205ENST00000614526 BCL11BQ9C0K0 894 aaPredicted RBP4.1□□□□□ -1.75
LIG4-205ENST00000614526 ZSWIM6Q9HCJ5 1215 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 UTRNP46939 3433 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 CNTNAP4Q9C0A0 1308 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 ZNF532Q9HCE3 1301 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 GPAA1O43292 621 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 FGAP02671 866 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 RPS8P62241 208 aaKnown RBP4.1□□□□□ -1.75
LIG4-205ENST00000614526 CCT2P78371 535 aaKnown RBP4.1□□□□□ -1.75
LIG4-205ENST00000614526 MSL1Q68DK7 614 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 Q6ZUG5 572 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 FERMT3Q86UX7 667 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 PROM2Q8N271 834 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 SPATA5Q8NB90 893 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 DDX11Q96FC9 970 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 LRP2BPQ9P2M1 347 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 CIZ1Q9ULV3 898 aaPredicted RBP4.1□□□□□ -1.75
LIG4-205ENST00000614526 MINPP1Q9UNW1 487 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 SMC3Q9UQE7 1217 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 NUP98P52948 1817 aa4.1□□□□□ -1.75
LIG4-205ENST00000614526 MROH5Q6ZUA9 1318 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 VPS37CA5D8V6 355 aaPredicted RBP4.09□□□□□ -1.75
LIG4-205ENST00000614526 PRKAB2O43741 272 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 RPS6KB1P23443 525 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 PSMA5P28066 241 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 GJB2P29033 226 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 MCM2P49736 904 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 NUCB2P80303 420 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 TXNRD1Q16881 649 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 FAM173BQ6P4H8 233 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 TXNRD3Q86VQ6 643 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 ARMT1Q9H993 441 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 HELLSQ9NRZ9 838 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 TOMM22Q9NS69 142 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 RAI14Q9P0K7 980 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 FBXO3Q9UK99 471 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 U3KPZ7 1027 aaPredicted RBP4.09□□□□□ -1.75
LIG4-205ENST00000614526 SMIM22K7EJ46 135 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 ONECUT3O60422 494 aaPredicted RBP4.09□□□□□ -1.75
LIG4-205ENST00000614526 PDE6AP16499 860 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 FGFR2P21802 821 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 APOBRQ0VD83 1088 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 ST3GAL1Q11201 340 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 CUL4AQ13619 759 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 TOB2Q14106 344 aaPredicted RBP4.09□□□□□ -1.75
LIG4-205ENST00000614526 RC3H1Q5TC82 1133 aaKnown RBP4.09□□□□□ -1.75
LIG4-205ENST00000614526 CNBD1Q8NA66 436 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 NKX2-3Q8TAU0 364 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 AIDAQ96BJ3 306 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 CHMP4CQ96CF2 233 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 NCOA5Q9HCD5 579 aaKnown RBP4.09□□□□□ -1.75
LIG4-205ENST00000614526 CWC22Q9HCG8 908 aaKnown RBP4.09□□□□□ -1.75
LIG4-205ENST00000614526 ANKIB1Q9P2G1 1089 aa4.09□□□□□ -1.75
LIG4-205ENST00000614526 DDX49Q9Y6V7 483 aaKnown RBP4.09□□□□□ -1.75
LIG4-205ENST00000614526 E7EWF7 191 aa4.09□□□□□ -1.76
LIG4-205ENST00000614526 FOXP2O15409 715 aa4.09□□□□□ -1.76
LIG4-205ENST00000614526 JAK2O60674 1132 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms