RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 AKAP2Q9Y2D5 859 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 MAP3K15Q6ZN16 1313 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ATRNO75882 1429 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 DOT1LQ8TEK3 1739 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 UVSSAQ2YD98 709 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 VPS37CA5D8V6 355 aaPredicted RBP12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 LARGE1O95461 756 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 CHMP4CQ96CF2 233 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 TCHHQ07283 1943 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 CDK11BP21127 795 aaKnown RBP12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 FOSBP53539 338 aa12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 EVCP57679 992 aa12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 LRRFIP1Q32MZ4 808 aaKnown RBP12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 GIGYF2Q6Y7W6 1299 aaKnown RBP12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 THRAP3Q9Y2W1 955 aaKnown RBP12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 DOCK2Q92608 1830 aa12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 AKAP11Q9UKA4 1901 aa12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 STARD3NLO95772 234 aa12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 GJB2P29033 226 aa12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 PIGBQ92521 554 aa12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 SMAP1Q8IYB5 467 aaPredicted RBP12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 PAG1Q9NWQ8 432 aa12.83□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 RGL2O15211 777 aa12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 ZFYP08048 801 aaPredicted RBP12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 ZNF710Q8N1W2 664 aa12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 BCORQ6W2J9 1755 aa12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 WDR19Q8NEZ3 1342 aa12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 EVA1CP58658 441 aa12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 RIC1Q4ADV7 1423 aa12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 PPFIA3O75145 1194 aa12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 EXOSC10Q01780 885 aaKnown RBP12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 FAM173BQ6P4H8 233 aa12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 NEK1Q96PY6 1258 aa12.82□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 LTBP4Q8N2S1 1624 aa12.81□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 RIOK3O14730 519 aaKnown RBP12.81□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 CYP19A1P11511 503 aaPredicted RBP12.81□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 ZSCAN20P17040 1043 aaPredicted RBP12.81□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 CCDC183Q5T5S1 534 aa12.81□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 KIF6Q6ZMV9 814 aa12.81□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 CKAP2LQ8IYA6 745 aa12.81□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 SYTL4Q96C24 671 aaPredicted RBP12.81□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 PYCARDQ9ULZ3 195 aa12.81□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 RNF113AO15541 343 aaKnown RBP12.8□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 GTF3C6Q969F1 213 aa12.8□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 RTL9Q8NET4 1388 aa12.8□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 MCM5P33992 734 aa12.8□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 PIP4K2AP48426 406 aaPredicted RBP12.8□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 CCDC83Q8IWF9 413 aa12.8□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 PFKFB2O60825 505 aa12.79□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 CYP21A2P08686 494 aa12.79□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 IL6STP40189 918 aaPredicted RBP12.79□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 MYRIPQ8NFW9 859 aa12.79□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 A0A1B0GUL7 405 aa12.79□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 FUCA2Q9BTY2 467 aa12.79□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 ATL3Q6DD88 541 aa12.79□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 VGLL2Q8N8G2 317 aa12.79□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 KCNJ4P48050 445 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 LRMPQ12912 555 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 LRRC24Q50LG9 513 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 DHX32Q7L7V1 743 aaKnown RBP12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 NLRP10Q86W26 655 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 CEP126Q9P2H0 1117 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 ZMYM6O95789 1325 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 CCDC57Q2TAC2 916 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 ZNF34Q8IZ26 560 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 ZNF274Q96GC6 653 aaPredicted RBP12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 TCEANC2Q96MN5 208 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 SALL1Q9NSC2 1324 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 DMTNQ08495 405 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 ASAP1Q9ULH1 1129 aa12.78□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 A0A1B0GUL6 1792 aa12.77□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 PTGS1P23219 599 aa12.77□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 CEBPZQ03701 1054 aaKnown RBP12.77□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 DNAJC10Q8IXB1 793 aa12.77□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 ZSCAN16Q9H4T2 348 aaPredicted RBP12.77□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 ZBTB3Q9H5J0 574 aa12.77□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 BTG4Q9NY30 223 aa12.77□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 TIAM2Q8IVF5 1701 aa12.77□□□□□ -0.36
SENP3-EIF4A1-201ENST00000614237 SLIT2O94813 1529 aa12.77□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 RBM43Q6ZSC3 357 aaKnown RBP12.77□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 MTERF4Q7Z6M4 381 aaKnown RBP12.77□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 EDC3Q96F86 508 aaKnown RBP12.77□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 SLC4A9Q96Q91 983 aa12.77□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 IFIT1P09914 478 aaKnown RBP12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 HSPD1P10809 573 aaKnown RBP12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 CCDC158Q5M9N0 1113 aa12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 NAA16Q6N069 864 aaPredicted RBP12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 SCAND2PQ9GZW5 306 aaPredicted RBP12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 TAF6LQ9Y6J9 622 aa12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 MAST3O60307 1309 aa12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 LARP1BQ659C4 914 aaKnown RBP12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 TTLL11Q8NHH1 800 aa12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 TRMT1Q9NXH9 659 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms