RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
GGA3-221ENST00000614198 DDX60Q8IY21 1712 aaKnown RBP11.91□□□□□ -0.5
GGA3-221ENST00000614198 FKBP4Q02790 459 aaKnown RBP eCLIP11.91□□□□□ -0.5
GGA3-221ENST00000614198 TFCP2L1Q9NZI6 479 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 MYH3P11055 1940 aa11.9□□□□□ -0.5
GGA3-221ENST00000614198 A0A0D9SFI3 127 aa11.9□□□□□ -0.5
GGA3-221ENST00000614198 GOLIM4O00461 696 aa11.9□□□□□ -0.5
GGA3-221ENST00000614198 NOL8Q76FK4 1167 aaKnown RBP11.9□□□□□ -0.5
GGA3-221ENST00000614198 DEFB132Q7Z7B7 95 aa11.9□□□□□ -0.5
GGA3-221ENST00000614198 XAGE2Q96GT9 111 aa11.9□□□□□ -0.5
GGA3-221ENST00000614198 CEP126Q9P2H0 1117 aa11.9□□□□□ -0.5
GGA3-221ENST00000614198 CDHR2Q9BYE9 1310 aa11.9□□□□□ -0.5
GGA3-221ENST00000614198 GLRX3O76003 335 aaKnown RBP11.9□□□□□ -0.5
GGA3-221ENST00000614198 IL15P40933 162 aaPredicted RBP11.9□□□□□ -0.5
GGA3-221ENST00000614198 PTH1RQ03431 593 aa11.9□□□□□ -0.5
GGA3-221ENST00000614198 EZH2Q15910 746 aaKnown RBP11.9□□□□□ -0.5
GGA3-221ENST00000614198 PLA2G12BQ9BX93 195 aa11.9□□□□□ -0.5
GGA3-221ENST00000614198 USP42Q9H9J4 1324 aaKnown RBP11.9□□□□□ -0.51
GGA3-221ENST00000614198 C4AP0C0L4 1744 aa11.89□□□□□ -0.51
GGA3-221ENST00000614198 RIC1Q4ADV7 1423 aa11.89□□□□□ -0.51
GGA3-221ENST00000614198 BAG4O95429 457 aaKnown RBP11.89□□□□□ -0.51
GGA3-221ENST00000614198 RBSNQ9H1K0 784 aa11.89□□□□□ -0.51
GGA3-221ENST00000614198 TAF6LQ9Y6J9 622 aa11.89□□□□□ -0.51
GGA3-221ENST00000614198 GYS1P13807 737 aa11.89□□□□□ -0.51
GGA3-221ENST00000614198 CPA1P15085 419 aa11.89□□□□□ -0.51
GGA3-221ENST00000614198 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
GGA3-221ENST00000614198 ZNF589Q86UQ0 364 aaPredicted RBP11.89□□□□□ -0.51
GGA3-221ENST00000614198 FSD1Q9BTV5 496 aa11.89□□□□□ -0.51
GGA3-221ENST00000614198 KLRK1P26718 216 aa11.89□□□□□ -0.51
GGA3-221ENST00000614198 NMIQ13287 307 aaPredicted RBP11.89□□□□□ -0.51
GGA3-221ENST00000614198 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
GGA3-221ENST00000614198 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
GGA3-221ENST00000614198 ERC2O15083 957 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 ZSCAN23Q3MJ62 389 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 CNTROBQ8N137 903 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 RNF214Q8ND24 703 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 GPR101Q96P66 508 aaPredicted RBP11.88□□□□□ -0.51
GGA3-221ENST00000614198 CCDC39Q9UFE4 941 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 BCORQ6W2J9 1755 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 A0A0G2JLW4 131 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 K7ELQ4 463 aaPredicted RBP11.88□□□□□ -0.51
GGA3-221ENST00000614198 JAG2Q9Y219 1238 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 TTC41PQ6P2S7 1318 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 CARMIL3Q8ND23 1372 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 PHKA1P46020 1223 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 COL23A1Q86Y22 540 aaPredicted RBP11.88□□□□□ -0.51
GGA3-221ENST00000614198 VGLL2Q8N8G2 317 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 MPHOSPH8Q99549 860 aa11.88□□□□□ -0.51
GGA3-221ENST00000614198 LETM1O95202 739 aaPredicted RBP11.87□□□□□ -0.51
GGA3-221ENST00000614198 GORABQ5T7V8 394 aa11.87□□□□□ -0.51
GGA3-221ENST00000614198 CLEC4GQ6UXB4 293 aa11.87□□□□□ -0.51
GGA3-221ENST00000614198 MYRIPQ8NFW9 859 aa11.87□□□□□ -0.51
GGA3-221ENST00000614198 FBXO41Q8TF61 875 aa11.87□□□□□ -0.51
GGA3-221ENST00000614198 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
GGA3-221ENST00000614198 PARP10Q53GL7 1025 aa11.87□□□□□ -0.51
GGA3-221ENST00000614198 OLFM4Q6UX06 510 aa11.87□□□□□ -0.51
GGA3-221ENST00000614198 UPF3BQ9BZI7 483 aaKnown RBP11.87□□□□□ -0.51
GGA3-221ENST00000614198 ZNF609O15014 1411 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 ZAP70P43403 619 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 BCAMP50895 628 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 DDR1Q08345 913 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 ATP2B3Q16720 1220 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 FOXD4L6Q3SYB3 417 aaPredicted RBP11.86□□□□□ -0.51
GGA3-221ENST00000614198 FOXD4L3Q6VB84 417 aaPredicted RBP11.86□□□□□ -0.51
GGA3-221ENST00000614198 WWC3Q9ULE0 1092 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 UBR3Q6ZT12 1888 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
GGA3-221ENST00000614198 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 GPATCH3Q96I76 525 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 DIAPH3Q9NSV4 1193 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 PDE8BO95263 885 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 IFIT1P09914 478 aaKnown RBP11.86□□□□□ -0.51
GGA3-221ENST00000614198 MCAMP43121 646 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 CHRNDQ07001 517 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 CASC1Q6TDU7 716 aa11.86□□□□□ -0.51
GGA3-221ENST00000614198 ATP5JP18859 108 aa11.85□□□□□ -0.51
GGA3-221ENST00000614198 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
GGA3-221ENST00000614198 CCDC152Q4G0S7 254 aa11.85□□□□□ -0.51
GGA3-221ENST00000614198 VPS53Q5VIR6 699 aa11.85□□□□□ -0.51
GGA3-221ENST00000614198 SGSM2O43147 1006 aa11.85□□□□□ -0.51
GGA3-221ENST00000614198 CIAO1O76071 339 aa11.85□□□□□ -0.51
GGA3-221ENST00000614198 TNRC6CQ9HCJ0 1690 aaKnown RBP11.85□□□□□ -0.51
GGA3-221ENST00000614198 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
GGA3-221ENST00000614198 GYG1P46976 350 aa11.85□□□□□ -0.51
GGA3-221ENST00000614198 PRR5LQ6MZQ0 368 aa11.85□□□□□ -0.51
GGA3-221ENST00000614198 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
GGA3-221ENST00000614198 EVI5LQ96CN4 794 aa11.85□□□□□ -0.51
GGA3-221ENST00000614198 SCN7AQ01118 1682 aa11.84□□□□□ -0.51
GGA3-221ENST00000614198 TTC39AQ5SRH9 613 aa11.84□□□□□ -0.51
GGA3-221ENST00000614198 PAG1Q9NWQ8 432 aa11.84□□□□□ -0.51
GGA3-221ENST00000614198 AOX1Q06278 1338 aa11.84□□□□□ -0.51
GGA3-221ENST00000614198 TM4SF1P30408 202 aa11.84□□□□□ -0.51
GGA3-221ENST00000614198 TPTE2Q6XPS3 522 aa11.84□□□□□ -0.51
GGA3-221ENST00000614198 TXNRD3Q86VQ6 643 aa11.84□□□□□ -0.51
GGA3-221ENST00000614198 TCEANC2Q96MN5 208 aa11.84□□□□□ -0.51
GGA3-221ENST00000614198 HAUS7Q99871 368 aa11.84□□□□□ -0.51
GGA3-221ENST00000614198 LSG1Q9H089 658 aaKnown RBP11.84□□□□□ -0.51
GGA3-221ENST00000614198 LMBRD1Q9NUN5 540 aa11.84□□□□□ -0.51
GGA3-221ENST00000614198 PRPF40AO75400 957 aaKnown RBP11.83□□□□□ -0.51
GGA3-221ENST00000614198 ADCK5Q3MIX3 580 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms