RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 HAUS7Q99871 368 aa21.35■■□□□ 1.01
SREK1-216ENST00000612404 PTGER2P43116 358 aa21.34■■□□□ 1.01
SREK1-216ENST00000612404 LEMD3Q9Y2U8 911 aa21.34■■□□□ 1.01
SREK1-216ENST00000612404 AK9Q5TCS8 1911 aa21.34■■□□□ 1.01
SREK1-216ENST00000612404 KIF13BQ9NQT8 1826 aa21.34■■□□□ 1.01
SREK1-216ENST00000612404 DPEP1P16444 411 aa21.34■■□□□ 1.01
SREK1-216ENST00000612404 GYG1P46976 350 aa21.34■■□□□ 1.01
SREK1-216ENST00000612404 CAVIN4Q5BKX8 364 aa21.34■■□□□ 1.01
SREK1-216ENST00000612404 OLFM4Q6UX06 510 aa21.34■■□□□ 1.01
SREK1-216ENST00000612404 TBC1D9Q6ZT07 1266 aa21.34■■□□□ 1.01
SREK1-216ENST00000612404 EVI5LQ96CN4 794 aa21.34■■□□□ 1.01
SREK1-216ENST00000612404 GGA1Q9UJY5 639 aa21.34■■□□□ 1.01
SREK1-216ENST00000612404 UFL1O94874 794 aa21.33■■□□□ 1.01
SREK1-216ENST00000612404 KLRK1P26718 216 aa21.33■■□□□ 1.01
SREK1-216ENST00000612404 FKBP4Q02790 459 aaKnown RBP eCLIP21.33■■□□□ 1.01
SREK1-216ENST00000612404 VPS37DQ86XT2 251 aa21.33■■□□□ 1.01
SREK1-216ENST00000612404 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.33■■□□□ 1.01
SREK1-216ENST00000612404 EDC3Q96F86 508 aaKnown RBP21.33■■□□□ 1.01
SREK1-216ENST00000612404 SNRKQ9NRH2 765 aa21.33■■□□□ 1.01
SREK1-216ENST00000612404 ZNF219Q9P2Y4 722 aaPredicted RBP21.33■■□□□ 1.01
SREK1-216ENST00000612404 LRRC37AA6NMS7 1700 aa21.33■■□□□ 1
SREK1-216ENST00000612404 UQCRFS1P1P0C7P4 283 aa21.32■■□□□ 1
SREK1-216ENST00000612404 SCARF1Q14162 830 aa21.32■■□□□ 1
SREK1-216ENST00000612404 SLX4Q8IY92 1834 aa21.32■■□□□ 1
SREK1-216ENST00000612404 ATP2B4P23634 1241 aa21.32■■□□□ 1
SREK1-216ENST00000612404 CASC1Q6TDU7 716 aa21.32■■□□□ 1
SREK1-216ENST00000612404 ZNF512BQ96KM6 892 aaPredicted RBP21.32■■□□□ 1
SREK1-216ENST00000612404 SPON1Q9HCB6 807 aa21.32■■□□□ 1
SREK1-216ENST00000612404 PAG1Q9NWQ8 432 aa21.32■■□□□ 1
SREK1-216ENST00000612404 PODXL2Q9NZ53 605 aa21.32■■□□□ 1
SREK1-216ENST00000612404 GOLIM4O00461 696 aa21.31■■□□□ 1
SREK1-216ENST00000612404 ARID4AP29374 1257 aaPredicted RBP21.31■■□□□ 1
SREK1-216ENST00000612404 MCAMP43121 646 aa21.31■■□□□ 1
SREK1-216ENST00000612404 TGFB2P61812 414 aa21.31■■□□□ 1
SREK1-216ENST00000612404 DLEC1Q9Y238 1755 aa21.31■■□□□ 1
SREK1-216ENST00000612404 PI16Q6UXB8 463 aa21.31■■□□□ 1
SREK1-216ENST00000612404 MPNDQ8N594 471 aa21.31■■□□□ 1
SREK1-216ENST00000612404 TTLL6Q8N841 843 aa21.31■■□□□ 1
SREK1-216ENST00000612404 FAM84BQ96KN1 310 aaPredicted RBP21.31■■□□□ 1
SREK1-216ENST00000612404 GPR101Q96P66 508 aaPredicted RBP21.31■■□□□ 1
SREK1-216ENST00000612404 FSD1Q9BTV5 496 aa21.31■■□□□ 1
SREK1-216ENST00000612404 C6orf229H3BNL8 230 aa21.3■■□□□ 1
SREK1-216ENST00000612404 TBC1D16Q8TBP0 767 aa21.3■■□□□ 1
SREK1-216ENST00000612404 GNL3LQ9NVN8 582 aaKnown RBP21.3■■□□□ 1
SREK1-216ENST00000612404 KCNA3P22001 575 aa21.29■■□□□ 1
SREK1-216ENST00000612404 ZAP70P43403 619 aa21.29■■□□□ 1
SREK1-216ENST00000612404 DPP8Q6V1X1 898 aaPredicted RBP21.29■■□□□ 1
SREK1-216ENST00000612404 POLLQ9UGP5 575 aa21.29■■□□□ 1
SREK1-216ENST00000612404 IQSEC3Q9UPP2 1182 aaPredicted RBP21.29■■□□□ 1
SREK1-216ENST00000612404 HIBADHP31937 336 aaKnown RBP21.29■■□□□ 1
SREK1-216ENST00000612404 RASGRF1Q13972 1273 aa21.29■■□□□ 1
SREK1-216ENST00000612404 TXNRD3Q86VQ6 643 aa21.29■■□□□ 1
SREK1-216ENST00000612404 SRCAPQ6ZRS2 3230 aa21.28■■□□□ 1
SREK1-216ENST00000612404 SEC24BO95487 1268 aa21.28■■□□□ 1
SREK1-216ENST00000612404 CD2APQ9Y5K6 639 aa21.28■■□□□ 1
SREK1-216ENST00000612404 CHMLP26374 656 aa21.28■■□□□ 1
SREK1-216ENST00000612404 FBXO33Q7Z6M2 555 aa21.28■■□□□ 1
SREK1-216ENST00000612404 SPATA5Q8NB90 893 aa21.28■■□□□ 1
SREK1-216ENST00000612404 HMG20BQ9P0W2 317 aa21.28■■□□□ 1
SREK1-216ENST00000612404 FRAT2O75474 233 aaPredicted RBP21.27■■□□□ 1
SREK1-216ENST00000612404 ANTXR1Q9H6X2 564 aa21.27■■□□□ 1
SREK1-216ENST00000612404 TSHZ2Q9NRE2 1034 aa21.27■■□□□ 1
SREK1-216ENST00000612404 PIM2Q9P1W9 311 aa21.27■■□□□ 1
SREK1-216ENST00000612404 WWC3Q9ULE0 1092 aa21.27■■□□□ 1
SREK1-216ENST00000612404 AKAP11Q9UKA4 1901 aa21.27■■□□□ 1
SREK1-216ENST00000612404 IRS2Q9Y4H2 1338 aa21.26■□□□□ 0.99
SREK1-216ENST00000612404 C21orf2O43822 256 aa21.26■□□□□ 0.99
SREK1-216ENST00000612404 DIAPH3Q9NSV4 1193 aa21.26■□□□□ 0.99
SREK1-216ENST00000612404 LTBP1Q14766 1721 aa21.26■□□□□ 0.99
SREK1-216ENST00000612404 ZNF804AQ7Z570 1209 aa21.26■□□□□ 0.99
SREK1-216ENST00000612404 KBTBD3Q8NAB2 608 aa21.26■□□□□ 0.99
SREK1-216ENST00000612404 C7orf43Q8WVR3 580 aa21.26■□□□□ 0.99
SREK1-216ENST00000612404 MFAP1P55081 439 aaKnown RBP21.25■□□□□ 0.99
SREK1-216ENST00000612404 KIAA1551Q9HCM1 1747 aa21.25■□□□□ 0.99
SREK1-216ENST00000612404 C15orf52Q6ZUT6 534 aaKnown RBP21.25■□□□□ 0.99
SREK1-216ENST00000612404 RIMBP2O15034 1052 aa21.24■□□□□ 0.99
SREK1-216ENST00000612404 CYP2E1P05181 493 aaPredicted RBP21.24■□□□□ 0.99
SREK1-216ENST00000612404 MED23Q9ULK4 1368 aa21.24■□□□□ 0.99
SREK1-216ENST00000612404 HIP1O00291 1037 aa21.23■□□□□ 0.99
SREK1-216ENST00000612404 TTF1Q15361 905 aaPredicted RBP21.23■□□□□ 0.99
SREK1-216ENST00000612404 CC2D2BQ6DHV5 1058 aa21.23■□□□□ 0.99
SREK1-216ENST00000612404 CWC27Q6UX04 472 aaKnown RBP21.23■□□□□ 0.99
SREK1-216ENST00000612404 DUOX1Q9NRD9 1551 aa21.23■□□□□ 0.99
SREK1-216ENST00000612404 DALRD3Q5D0E6 543 aaKnown RBP21.23■□□□□ 0.99
SREK1-216ENST00000612404 ZC3H12CQ9C0D7 883 aaKnown RBP21.23■□□□□ 0.99
SREK1-216ENST00000612404 DENND2AQ9ULE3 1009 aa21.23■□□□□ 0.99
SREK1-216ENST00000612404 ESYT1Q9BSJ8 1104 aa21.22■□□□□ 0.99
SREK1-216ENST00000612404 UPF2Q9HAU5 1272 aaKnown RBP21.22■□□□□ 0.99
SREK1-216ENST00000612404 SEMA3EO15041 775 aa21.22■□□□□ 0.99
SREK1-216ENST00000612404 WASHC4Q2M389 1173 aa21.22■□□□□ 0.99
SREK1-216ENST00000612404 PIH1D3Q9NQM4 214 aaKnown RBP21.22■□□□□ 0.99
SREK1-216ENST00000612404 CCDC93Q567U6 631 aa21.21■□□□□ 0.99
SREK1-216ENST00000612404 EYA3Q99504 573 aa21.21■□□□□ 0.99
SREK1-216ENST00000612404 IDH1O75874 414 aaKnown RBP21.2■□□□□ 0.98
SREK1-216ENST00000612404 CHAF1AQ13111 956 aaPredicted RBP21.2■□□□□ 0.98
SREK1-216ENST00000612404 NLGN2Q8NFZ4 835 aa21.2■□□□□ 0.98
SREK1-216ENST00000612404 RUFY2Q8WXA3 655 aa21.2■□□□□ 0.98
SREK1-216ENST00000612404 COL1A1P02452 1464 aaPredicted RBP21.2■□□□□ 0.98
SREK1-216ENST00000612404 MYH13Q9UKX3 1938 aa21.2■□□□□ 0.98
SREK1-216ENST00000612404 NMIQ13287 307 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms