RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 MNAT1P51948 309 aa16.76■□□□□ 0.27
VPS36-207ENST00000611132 BICC1Q9H694 974 aaKnown RBP16.76■□□□□ 0.27
VPS36-207ENST00000611132 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
VPS36-207ENST00000611132 COPS6Q7L5N1 327 aa16.76■□□□□ 0.27
VPS36-207ENST00000611132 EHBP1Q8NDI1 1231 aa16.76■□□□□ 0.27
VPS36-207ENST00000611132 ARHGAP6O43182 974 aa16.75■□□□□ 0.27
VPS36-207ENST00000611132 ZNF569Q5MCW4 686 aa16.75■□□□□ 0.27
VPS36-207ENST00000611132 NBPF11Q86T75 865 aa16.75■□□□□ 0.27
VPS36-207ENST00000611132 CFAP65Q6ZU64 1925 aaKnown RBP16.75■□□□□ 0.27
VPS36-207ENST00000611132 CKAP4Q07065 602 aaKnown RBP16.75■□□□□ 0.27
VPS36-207ENST00000611132 FKBP15Q5T1M5 1219 aa16.75■□□□□ 0.27
VPS36-207ENST00000611132 NCOA3Q9Y6Q9 1424 aa16.75■□□□□ 0.27
VPS36-207ENST00000611132 RHOXF2BP0C7M4 288 aa16.75■□□□□ 0.27
VPS36-207ENST00000611132 IFIT5Q13325 482 aaKnown RBP16.75■□□□□ 0.27
VPS36-207ENST00000611132 ATP2B3Q16720 1220 aa16.75■□□□□ 0.27
VPS36-207ENST00000611132 TTC31Q49AM3 519 aaPredicted RBP16.75■□□□□ 0.27
VPS36-207ENST00000611132 RHOXF2Q9BQY4 288 aa16.75■□□□□ 0.27
VPS36-207ENST00000611132 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
VPS36-207ENST00000611132 ASXL2Q76L83 1435 aa16.75■□□□□ 0.27
VPS36-207ENST00000611132 VGLL3A8MV65 326 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 OAS2P29728 719 aaKnown RBP16.74■□□□□ 0.27
VPS36-207ENST00000611132 ZC3H6P61129 1189 aaKnown RBP16.74■□□□□ 0.27
VPS36-207ENST00000611132 SPAG1Q07617 926 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 TAF4BQ92750 862 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 GNL3LQ9NVN8 582 aaKnown RBP16.74■□□□□ 0.27
VPS36-207ENST00000611132 LRP2BPQ9P2M1 347 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 ETF1P62495 437 aaKnown RBP16.74■□□□□ 0.27
VPS36-207ENST00000611132 ADCK5Q3MIX3 580 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 AKAP4Q5JQC9 854 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 LMBR1LQ6UX01 489 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 NCOA5Q9HCD5 579 aaKnown RBP16.74■□□□□ 0.27
VPS36-207ENST00000611132 JADE2Q9NQC1 790 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 NLRP12P59046 1061 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 CCDC129Q6ZRS4 1044 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 ZBTB9Q96C00 473 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 IQGAP3Q86VI3 1631 aa16.74■□□□□ 0.27
VPS36-207ENST00000611132 LRRIQ1Q96JM4 1722 aa16.73■□□□□ 0.27
VPS36-207ENST00000611132 ZNF202O95125 648 aa16.73■□□□□ 0.27
VPS36-207ENST00000611132 CDC25BP30305 580 aa16.73■□□□□ 0.27
VPS36-207ENST00000611132 AFMP43652 599 aa16.73■□□□□ 0.27
VPS36-207ENST00000611132 TFCP2Q12800 502 aa16.73■□□□□ 0.27
VPS36-207ENST00000611132 NUTM2AQ8IVF1 878 aaPredicted RBP16.73■□□□□ 0.27
VPS36-207ENST00000611132 HOXB7P09629 217 aa16.73■□□□□ 0.27
VPS36-207ENST00000611132 RNF187Q5TA31 235 aaPredicted RBP16.73■□□□□ 0.27
VPS36-207ENST00000611132 ANO1Q5XXA6 986 aa16.73■□□□□ 0.27
VPS36-207ENST00000611132 UGGT1Q9NYU2 1555 aa16.73■□□□□ 0.27
VPS36-207ENST00000611132 ATF3P18847 181 aa16.73■□□□□ 0.27
VPS36-207ENST00000611132 MAP3K12Q12852 859 aa16.73■□□□□ 0.27
VPS36-207ENST00000611132 PLCD3Q8N3E9 789 aa16.73■□□□□ 0.27
VPS36-207ENST00000611132 CWC25Q9NXE8 425 aaPredicted RBP16.73■□□□□ 0.27
VPS36-207ENST00000611132 CDC42BPAQ5VT25 1732 aa16.72■□□□□ 0.27
VPS36-207ENST00000611132 MINDY4BA8MYZ0 360 aa16.72■□□□□ 0.27
VPS36-207ENST00000611132 CHMP4BP1P59074 171 aa16.72■□□□□ 0.27
VPS36-207ENST00000611132 IRX3P78415 501 aaPredicted RBP16.72■□□□□ 0.27
VPS36-207ENST00000611132 NCBP1Q09161 790 aaKnown RBP16.72■□□□□ 0.27
VPS36-207ENST00000611132 GOLGA6L7A0A1B0GV03 622 aa16.72■□□□□ 0.27
VPS36-207ENST00000611132 AKR1B15C9JRZ8 316 aaPredicted RBP16.72■□□□□ 0.27
VPS36-207ENST00000611132 RNF113AO15541 343 aaKnown RBP16.72■□□□□ 0.27
VPS36-207ENST00000611132 IL15P40933 162 aaPredicted RBP16.72■□□□□ 0.27
VPS36-207ENST00000611132 SMC1AQ14683 1233 aaKnown RBP16.72■□□□□ 0.27
VPS36-207ENST00000611132 RNF41Q9H4P4 317 aaPredicted RBP16.72■□□□□ 0.27
VPS36-207ENST00000611132 KIAA1468Q9P260 1216 aa16.72■□□□□ 0.27
VPS36-207ENST00000611132 RAD21O60216 631 aa16.71■□□□□ 0.27
VPS36-207ENST00000611132 MICALL1Q8N3F8 863 aa16.71■□□□□ 0.27
VPS36-207ENST00000611132 USP28Q96RU2 1077 aa16.71■□□□□ 0.27
VPS36-207ENST00000611132 LAMC1P11047 1609 aa16.71■□□□□ 0.27
VPS36-207ENST00000611132 PREX2Q70Z35 1606 aa16.71■□□□□ 0.27
VPS36-207ENST00000611132 EBAG9O00559 213 aa16.71■□□□□ 0.27
VPS36-207ENST00000611132 WDHD1O75717 1129 aaPredicted RBP16.71■□□□□ 0.27
VPS36-207ENST00000611132 SNRPA1P09661 255 aaKnown RBP16.71■□□□□ 0.27
VPS36-207ENST00000611132 ZSCAN26Q16670 478 aa16.71■□□□□ 0.27
VPS36-207ENST00000611132 PYM1Q9BRP8 204 aaKnown RBP16.71■□□□□ 0.27
VPS36-207ENST00000611132 MYO5CQ9NQX4 1742 aa16.71■□□□□ 0.27
VPS36-207ENST00000611132 PSDA5PKW4 1024 aaPredicted RBP16.71■□□□□ 0.26
VPS36-207ENST00000611132 TTF1Q15361 905 aaPredicted RBP16.71■□□□□ 0.26
VPS36-207ENST00000611132 GPR161Q8N6U8 529 aaKnown RBP16.71■□□□□ 0.26
VPS36-207ENST00000611132 HELLSQ9NRZ9 838 aa16.71■□□□□ 0.26
VPS36-207ENST00000611132 A0A1B0GUL7 405 aa16.7■□□□□ 0.26
VPS36-207ENST00000611132 ADALQ6DHV7 355 aa16.7■□□□□ 0.26
VPS36-207ENST00000611132 OTUD7BQ6GQQ9 843 aa16.7■□□□□ 0.26
VPS36-207ENST00000611132 ALS2CR12Q96Q35 445 aa16.7■□□□□ 0.26
VPS36-207ENST00000611132 CROCC2H7BZ55 1655 aa16.7■□□□□ 0.26
VPS36-207ENST00000611132 RRAGBQ5VZM2 374 aa16.7■□□□□ 0.26
VPS36-207ENST00000611132 IPO4Q8TEX9 1081 aaKnown RBP16.7■□□□□ 0.26
VPS36-207ENST00000611132 ADCY10Q96PN6 1610 aa16.7■□□□□ 0.26
VPS36-207ENST00000611132 CYLC1P35663 651 aaPredicted RBP16.7■□□□□ 0.26
VPS36-207ENST00000611132 ZBTB3Q9H5J0 574 aa16.7■□□□□ 0.26
VPS36-207ENST00000611132 MATR3P43243 847 aaKnown RBP eCLIP16.69■□□□□ 0.26
VPS36-207ENST00000611132 MTIF2P46199 727 aaKnown RBP16.69■□□□□ 0.26
VPS36-207ENST00000611132 STX17P56962 302 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 CACNA2D4Q7Z3S7 1137 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 CTCFLQ8NI51 663 aaPredicted RBP16.69■□□□□ 0.26
VPS36-207ENST00000611132 A0A0D9SFI3 127 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 KRT18P05783 430 aaKnown RBP16.69■□□□□ 0.26
VPS36-207ENST00000611132 CNGA4Q8IV77 575 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 KRI1Q8N9T8 703 aaKnown RBP16.69■□□□□ 0.26
VPS36-207ENST00000611132 SBNO1A3KN83 1393 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 TUBB2AQ13885 445 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 MAP4K1Q92918 833 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 TUBB2BQ9BVA1 445 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms