RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 STAMBPO95630 424 aa17.86■□□□□ 0.45
TNXB-208ENST00000611016 CALM1P0DP23 149 aa17.86■□□□□ 0.45
TNXB-208ENST00000611016 CALM2P0DP24 149 aa17.86■□□□□ 0.45
TNXB-208ENST00000611016 CALM3P0DP25 149 aa17.86■□□□□ 0.45
TNXB-208ENST00000611016 CCNL1Q9UK58 526 aaPredicted RBP17.86■□□□□ 0.45
TNXB-208ENST00000611016 KAT6BQ8WYB5 2073 aa17.86■□□□□ 0.45
TNXB-208ENST00000611016 ZSCAN22P10073 491 aaPredicted RBP17.85■□□□□ 0.45
TNXB-208ENST00000611016 RRAGBQ5VZM2 374 aa17.85■□□□□ 0.45
TNXB-208ENST00000611016 HOOK3Q86VS8 718 aa17.85■□□□□ 0.45
TNXB-208ENST00000611016 BICC1Q9H694 974 aaKnown RBP17.85■□□□□ 0.45
TNXB-208ENST00000611016 VAMP4O75379 141 aa17.85■□□□□ 0.45
TNXB-208ENST00000611016 CA8P35219 290 aa17.85■□□□□ 0.45
TNXB-208ENST00000611016 NOP2P46087 812 aaKnown RBP17.85■□□□□ 0.45
TNXB-208ENST00000611016 SOS1Q07889 1333 aaPredicted RBP17.85■□□□□ 0.45
TNXB-208ENST00000611016 TBC1D32Q96NH3 1257 aa17.85■□□□□ 0.45
TNXB-208ENST00000611016 CHST3Q7LGC8 479 aa17.84■□□□□ 0.45
TNXB-208ENST00000611016 CTAGE1Q96RT6 745 aa17.84■□□□□ 0.45
TNXB-208ENST00000611016 USP37Q86T82 979 aa17.84■□□□□ 0.45
TNXB-208ENST00000611016 C6orf50Q9HD87 102 aa17.84■□□□□ 0.45
TNXB-208ENST00000611016 RBM27Q9P2N5 1060 aaKnown RBP17.84■□□□□ 0.45
TNXB-208ENST00000611016 YTHDC2Q9H6S0 1430 aaKnown RBP17.84■□□□□ 0.45
TNXB-208ENST00000611016 ZNF165P49910 485 aa17.84■□□□□ 0.45
TNXB-208ENST00000611016 CNBD1Q8NA66 436 aa17.84■□□□□ 0.45
TNXB-208ENST00000611016 RRP36Q96EU6 259 aaKnown RBP17.84■□□□□ 0.45
TNXB-208ENST00000611016 FERMT1Q9BQL6 677 aa17.84■□□□□ 0.45
TNXB-208ENST00000611016 IFFO1Q0D2I5 559 aa17.84■□□□□ 0.45
TNXB-208ENST00000611016 KIAA0556O60303 1618 aa17.84■□□□□ 0.45
TNXB-208ENST00000611016 EIF2AK4Q9P2K8 1649 aaKnown RBP17.84■□□□□ 0.45
TNXB-208ENST00000611016 TTC41PQ6P2S7 1318 aa17.83■□□□□ 0.45
TNXB-208ENST00000611016 SPAG1Q07617 926 aa17.83■□□□□ 0.45
TNXB-208ENST00000611016 PRPF4BQ13523 1007 aaKnown RBP17.83■□□□□ 0.45
TNXB-208ENST00000611016 EIF4G3O43432 1585 aaKnown RBP17.83■□□□□ 0.45
TNXB-208ENST00000611016 ZFYVE9O95405 1425 aa17.83■□□□□ 0.44
TNXB-208ENST00000611016 CEP85Q6P2H3 762 aa17.83■□□□□ 0.44
TNXB-208ENST00000611016 ORAI2Q96SN7 254 aa17.83■□□□□ 0.44
TNXB-208ENST00000611016 SPDYE3A6NKU9 549 aa17.83■□□□□ 0.44
TNXB-208ENST00000611016 STK32BQ9NY57 414 aa17.83■□□□□ 0.44
TNXB-208ENST00000611016 N4BP3O15049 544 aa17.82■□□□□ 0.44
TNXB-208ENST00000611016 LMOD1P29536 600 aaPredicted RBP17.82■□□□□ 0.44
TNXB-208ENST00000611016 FAM89AQ96GI7 184 aa17.82■□□□□ 0.44
TNXB-208ENST00000611016 CDCA7Q9BWT1 371 aaPredicted RBP17.82■□□□□ 0.44
TNXB-208ENST00000611016 RTL9Q8NET4 1388 aa17.82■□□□□ 0.44
TNXB-208ENST00000611016 KLHL40Q2TBA0 621 aa17.82■□□□□ 0.44
TNXB-208ENST00000611016 DHX37Q8IY37 1157 aaKnown RBP17.82■□□□□ 0.44
TNXB-208ENST00000611016 CARD14Q9BXL6 1004 aa17.82■□□□□ 0.44
TNXB-208ENST00000611016 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.82■□□□□ 0.44
TNXB-208ENST00000611016 PLCD4Q9BRC7 762 aa17.82■□□□□ 0.44
TNXB-208ENST00000611016 GJA3Q9Y6H8 435 aa17.82■□□□□ 0.44
TNXB-208ENST00000611016 MARCKSP29966 332 aaPredicted RBP17.82■□□□□ 0.44
TNXB-208ENST00000611016 TNNQ9UQP3 1299 aa17.82■□□□□ 0.44
TNXB-208ENST00000611016 CTTNBP2Q8WZ74 1663 aa17.82■□□□□ 0.44
TNXB-208ENST00000611016 KCNG4Q8TDN1 519 aa17.82■□□□□ 0.44
TNXB-208ENST00000611016 CCDC171Q6TFL3 1326 aa17.81■□□□□ 0.44
TNXB-208ENST00000611016 PHACTR2O75167 634 aa17.81■□□□□ 0.44
TNXB-208ENST00000611016 PLVAPQ9BX97 442 aa17.81■□□□□ 0.44
TNXB-208ENST00000611016 PAXBP1Q9Y5B6 917 aa17.81■□□□□ 0.44
TNXB-208ENST00000611016 DDX21Q9NR30 783 aaKnown RBP eCLIP17.81■□□□□ 0.44
TNXB-208ENST00000611016 UHRF1BP1Q6BDS2 1440 aa17.81■□□□□ 0.44
TNXB-208ENST00000611016 TNNI2P48788 182 aa17.8■□□□□ 0.44
TNXB-208ENST00000611016 B4DLN1 442 aa17.8■□□□□ 0.44
TNXB-208ENST00000611016 MRPL12P52815 198 aaKnown RBP17.8■□□□□ 0.44
TNXB-208ENST00000611016 ZNF790Q6PG37 636 aa17.8■□□□□ 0.44
TNXB-208ENST00000611016 GIGYF2Q6Y7W6 1299 aaKnown RBP17.8■□□□□ 0.44
TNXB-208ENST00000611016 CNPY2Q9Y2B0 182 aa17.8■□□□□ 0.44
TNXB-208ENST00000611016 UFL1O94874 794 aa17.8■□□□□ 0.44
TNXB-208ENST00000611016 ADCY5O95622 1261 aa17.8■□□□□ 0.44
TNXB-208ENST00000611016 CKAP4Q07065 602 aaKnown RBP17.8■□□□□ 0.44
TNXB-208ENST00000611016 GIMAP6Q6P9H5 292 aa17.8■□□□□ 0.44
TNXB-208ENST00000611016 KRT13P13646 458 aa17.8■□□□□ 0.44
TNXB-208ENST00000611016 HCLS1P14317 486 aaPredicted RBP17.79■□□□□ 0.44
TNXB-208ENST00000611016 ASIC1P78348 528 aa17.79■□□□□ 0.44
TNXB-208ENST00000611016 TBC1D5Q92609 795 aa17.79■□□□□ 0.44
TNXB-208ENST00000611016 SYNCQ9H7C4 482 aa17.79■□□□□ 0.44
TNXB-208ENST00000611016 SAP30BPQ9UHR5 308 aaKnown RBP17.79■□□□□ 0.44
TNXB-208ENST00000611016 DENND2AQ9ULE3 1009 aa17.79■□□□□ 0.44
TNXB-208ENST00000611016 PARD3Q8TEW0 1356 aa17.79■□□□□ 0.44
TNXB-208ENST00000611016 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
TNXB-208ENST00000611016 BBXQ8WY36 941 aaPredicted RBP17.79■□□□□ 0.44
TNXB-208ENST00000611016 APOBRQ0VD83 1088 aa17.79■□□□□ 0.44
TNXB-208ENST00000611016 TCHPQ9BT92 498 aa17.79■□□□□ 0.44
TNXB-208ENST00000611016 UNC13AQ9UPW8 1703 aa17.79■□□□□ 0.44
TNXB-208ENST00000611016 ITGA6P23229 1130 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 PRPHP41219 470 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 PLBD2Q8NHP8 589 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 PRIMPOLQ96LW4 560 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 BCCIPQ9P287 314 aaKnown RBP eCLIP17.78■□□□□ 0.44
TNXB-208ENST00000611016 CALML3P27482 149 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 HSP90AA4PQ58FG1 418 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 TESK2Q96S53 571 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 ADAMTS12P58397 1594 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 KRT2P35908 639 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 DCTPP1Q9H773 170 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 TRIM75PA6NK02 468 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 TUBB4BP68371 445 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 MRPS27Q92552 414 aaKnown RBP17.78■□□□□ 0.44
TNXB-208ENST00000611016 C16orf45Q96MC5 204 aaPredicted RBP17.78■□□□□ 0.44
TNXB-208ENST00000611016 SPAG5Q96R06 1193 aa17.78■□□□□ 0.44
TNXB-208ENST00000611016 HLTFQ14527 1009 aaKnown RBP eCLIP17.77■□□□□ 0.44
TNXB-208ENST00000611016 PARP10Q53GL7 1025 aa17.77■□□□□ 0.44
TNXB-208ENST00000611016 CREB3L3Q68CJ9 461 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms