RNA–Protein interactions for RNA: ENST00000609858.1

AC004948.1-201, humanhuman

BASIC

Gene AC004948.1, Length 672 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004948.1-201ENST00000609858 SMC1BQ8NDV3 1235 aa8.19□□□□□ -1.1
AC004948.1-201ENST00000609858 CD2APQ9Y5K6 639 aa8.19□□□□□ -1.1
AC004948.1-201ENST00000609858 ACIN1Q9UKV3 1341 aaKnown RBP8.19□□□□□ -1.1
AC004948.1-201ENST00000609858 CRB1P82279 1406 aa8.19□□□□□ -1.1
AC004948.1-201ENST00000609858 TRPM1Q7Z4N2 1603 aa8.18□□□□□ -1.1
AC004948.1-201ENST00000609858 PRICKLE2Q7Z3G6 844 aa8.18□□□□□ -1.1
AC004948.1-201ENST00000609858 SCARF2Q96GP6 870 aaPredicted RBP8.18□□□□□ -1.1
AC004948.1-201ENST00000609858 TFCP2L1Q9NZI6 479 aa8.18□□□□□ -1.1
AC004948.1-201ENST00000609858 DNMT3AQ9Y6K1 912 aaPredicted RBP8.18□□□□□ -1.1
AC004948.1-201ENST00000609858 LY75O60449 1722 aa8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 BRCA1P38398 1863 aaKnown RBP8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 ESPNB1AK53 854 aa8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 LILRA1O75019 489 aa8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 ARHGEF15O94989 841 aa8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 RHOQP17081 205 aa8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 TMEM132EQ6IEE7 984 aa8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 COL23A1Q86Y22 540 aaPredicted RBP8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 HIRIP3Q9BW71 556 aaPredicted RBP8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 GPRASP1Q5JY77 1395 aa8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 C10orf71Q711Q0 1435 aa8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 PXDNLA1KZ92 1463 aa8.17□□□□□ -1.1
AC004948.1-201ENST00000609858 HSPA8P11142 646 aaKnown RBP8.16□□□□□ -1.1
AC004948.1-201ENST00000609858 ADD1P35611 737 aaKnown RBP8.16□□□□□ -1.1
AC004948.1-201ENST00000609858 TSGA10IPQ3SY00 556 aa8.16□□□□□ -1.1
AC004948.1-201ENST00000609858 CCDC88AQ3V6T2 1871 aa8.16□□□□□ -1.1
AC004948.1-201ENST00000609858 KANK3Q6NY19 840 aa8.16□□□□□ -1.1
AC004948.1-201ENST00000609858 TBC1D9Q6ZT07 1266 aa8.16□□□□□ -1.1
AC004948.1-201ENST00000609858 CASP8AP2Q9UKL3 1982 aa8.16□□□□□ -1.1
AC004948.1-201ENST00000609858 COL18A1P39060 1754 aa8.15□□□□□ -1.1
AC004948.1-201ENST00000609858 USP54Q70EL1 1684 aa8.15□□□□□ -1.1
AC004948.1-201ENST00000609858 BRD4O60885 1362 aaPredicted RBP8.15□□□□□ -1.1
AC004948.1-201ENST00000609858 SRSF11Q05519 484 aaKnown RBP8.15□□□□□ -1.1
AC004948.1-201ENST00000609858 SAFB2Q14151 953 aaKnown RBP eCLIP8.15□□□□□ -1.1
AC004948.1-201ENST00000609858 LYPD4Q6UWN0 246 aa8.15□□□□□ -1.1
AC004948.1-201ENST00000609858 RIPOR1Q6ZS17 1223 aa8.15□□□□□ -1.1
AC004948.1-201ENST00000609858 AIDAQ96BJ3 306 aa8.15□□□□□ -1.1
AC004948.1-201ENST00000609858 CCDC85AQ96PX6 553 aaPredicted RBP8.15□□□□□ -1.1
AC004948.1-201ENST00000609858 CUEDC1Q9NWM3 386 aaPredicted RBP8.15□□□□□ -1.1
AC004948.1-201ENST00000609858 KIF13BQ9NQT8 1826 aa8.15□□□□□ -1.11
AC004948.1-201ENST00000609858 ARFGEF1Q9Y6D6 1849 aa8.15□□□□□ -1.11
AC004948.1-201ENST00000609858 ITSN1Q15811 1721 aa8.15□□□□□ -1.11
AC004948.1-201ENST00000609858 USP6P35125 1406 aa8.14□□□□□ -1.11
AC004948.1-201ENST00000609858 ABCC11Q96J66 1382 aa8.14□□□□□ -1.11
AC004948.1-201ENST00000609858 PRR36Q9H6K5 1346 aa8.14□□□□□ -1.11
AC004948.1-201ENST00000609858 MEN1O00255 615 aa8.14□□□□□ -1.11
AC004948.1-201ENST00000609858 DLL1O00548 723 aa8.14□□□□□ -1.11
AC004948.1-201ENST00000609858 MCCD1P59942 119 aaPredicted RBP8.14□□□□□ -1.11
AC004948.1-201ENST00000609858 CFAP70Q5T0N1 1121 aa8.14□□□□□ -1.11
AC004948.1-201ENST00000609858 FOXR1Q6PIV2 292 aa8.14□□□□□ -1.11
AC004948.1-201ENST00000609858 PPP1R12CQ9BZL4 782 aa8.14□□□□□ -1.11
AC004948.1-201ENST00000609858 ENAMQ9NRM1 1142 aa8.14□□□□□ -1.11
AC004948.1-201ENST00000609858 ANKARQ7Z5J8 1434 aa8.13□□□□□ -1.11
AC004948.1-201ENST00000609858 ZBTB7CA1YPR0 619 aa8.13□□□□□ -1.11
AC004948.1-201ENST00000609858 PALM3A6NDB9 673 aaPredicted RBP8.13□□□□□ -1.11
AC004948.1-201ENST00000609858 ATP5J2-PTCD1G3V325 749 aa8.13□□□□□ -1.11
AC004948.1-201ENST00000609858 GPR25O00155 361 aa8.13□□□□□ -1.11
AC004948.1-201ENST00000609858 GAS6Q14393 721 aa8.13□□□□□ -1.11
AC004948.1-201ENST00000609858 C9orf131Q5VYM1 1079 aa8.13□□□□□ -1.11
AC004948.1-201ENST00000609858 ARHGAP27Q6ZUM4 889 aa8.13□□□□□ -1.11
AC004948.1-201ENST00000609858 KDF1Q8NAX2 398 aaPredicted RBP8.13□□□□□ -1.11
AC004948.1-201ENST00000609858 TAF1LQ8IZX4 1826 aa8.13□□□□□ -1.11
AC004948.1-201ENST00000609858 NUP155O75694 1391 aa8.12□□□□□ -1.11
AC004948.1-201ENST00000609858 ADGRF5Q8IZF2 1346 aa8.12□□□□□ -1.11
AC004948.1-201ENST00000609858 IGHA1P01876 353 aa8.12□□□□□ -1.11
AC004948.1-201ENST00000609858 CELA2BP08218 269 aaPredicted RBP8.12□□□□□ -1.11
AC004948.1-201ENST00000609858 TOM1L2Q6ZVM7 507 aa8.12□□□□□ -1.11
AC004948.1-201ENST00000609858 SMIM5Q71RC9 77 aa8.12□□□□□ -1.11
AC004948.1-201ENST00000609858 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
AC004948.1-201ENST00000609858 TFIP11Q9UBB9 837 aaKnown RBP8.12□□□□□ -1.11
AC004948.1-201ENST00000609858 YTHDC2Q9H6S0 1430 aaKnown RBP8.12□□□□□ -1.11
AC004948.1-201ENST00000609858 CPDO75976 1380 aa8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 KDM2BQ8NHM5 1336 aa8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 RNF144AP50876 292 aaPredicted RBP8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 FOXK2Q01167 660 aa8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 SLFNL1Q499Z3 407 aa8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 RNF135Q8IUD6 432 aa8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 NFATC2IPQ8NCF5 419 aa8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 ZNF592Q92610 1267 aa8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 ARID3AQ99856 593 aa8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 CDCA7Q9BWT1 371 aaPredicted RBP8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 MBIPQ9NS73 344 aa8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 SERPINA10Q9UK55 444 aa8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 MAFBQ9Y5Q3 323 aaPredicted RBP8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 C5P01031 1676 aa8.11□□□□□ -1.11
AC004948.1-201ENST00000609858 CNTNAP1P78357 1384 aa8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 ANKRD30BQ9BXX2 1392 aa8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 ATP9BO43861 1147 aa8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 SRPK2P78362 688 aaKnown RBP8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 SLC27A3Q5K4L6 730 aa8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 PODNQ7Z5L7 613 aa8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 TRIM22Q8IYM9 498 aa8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 PLPP7Q8NBV4 271 aa8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 NGDNQ8NEJ9 315 aaKnown RBP8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 NEDD1Q8NHV4 660 aa8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 CCDC97Q96F63 343 aaPredicted RBP8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 GAS2L1Q99501 681 aaPredicted RBP8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 BCS1LQ9Y276 419 aa8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 VPS8Q8N3P4 1428 aa8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 PLEKHG2Q9H7P9 1386 aa8.1□□□□□ -1.11
AC004948.1-201ENST00000609858 TOGARAM1Q9Y4F4 1720 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms