RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 HIRAP54198 1017 aaPredicted RBP17.98■□□□□ 0.47
PRDM16-210ENST00000607632 DCAF8Q5TAQ9 597 aa17.98■□□□□ 0.47
PRDM16-210ENST00000607632 MICALL2Q8IY33 904 aa17.98■□□□□ 0.47
PRDM16-210ENST00000607632 HELBQ8NG08 1087 aaPredicted RBP17.98■□□□□ 0.47
PRDM16-210ENST00000607632 ZC3H15Q8WU90 426 aaKnown RBP17.98■□□□□ 0.47
PRDM16-210ENST00000607632 MEIS3Q99687 375 aa17.98■□□□□ 0.47
PRDM16-210ENST00000607632 CNNM1Q9NRU3 951 aa17.98■□□□□ 0.47
PRDM16-210ENST00000607632 HDAC5Q9UQL6 1122 aa17.98■□□□□ 0.47
PRDM16-210ENST00000607632 TNNQ9UQP3 1299 aa17.98■□□□□ 0.47
PRDM16-210ENST00000607632 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
PRDM16-210ENST00000607632 SHTN1A0MZ66 631 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 USP17L3A6NCW0 530 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 USP17L4A6NCW7 530 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 ZNF280AP59817 542 aaPredicted RBP17.97■□□□□ 0.47
PRDM16-210ENST00000607632 UBE4AQ14139 1066 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 DACT2Q5SW24 774 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 STRIP1Q5VSL9 837 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 ZKSCAN2Q63HK3 967 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 MAP1SQ66K74 1059 aaPredicted RBP17.97■□□□□ 0.47
PRDM16-210ENST00000607632 USP17L1Q7RTZ2 530 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 CNTROBQ8N137 903 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 VGLL2Q8N8G2 317 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 TRPM4Q8TD43 1214 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 CLEC11AQ9Y240 323 aa17.97■□□□□ 0.47
PRDM16-210ENST00000607632 H7C1D1 291 aa17.96■□□□□ 0.47
PRDM16-210ENST00000607632 KCNJ4P48050 445 aa17.96■□□□□ 0.47
PRDM16-210ENST00000607632 PTPN12Q05209 780 aaKnown RBP17.96■□□□□ 0.47
PRDM16-210ENST00000607632 CD209Q9NNX6 404 aa17.96■□□□□ 0.47
PRDM16-210ENST00000607632 FBXO3Q9UK99 471 aa17.96■□□□□ 0.47
PRDM16-210ENST00000607632 TRPM7Q96QT4 1865 aa17.95■□□□□ 0.46
PRDM16-210ENST00000607632 GNAI3P08754 354 aa17.95■□□□□ 0.46
PRDM16-210ENST00000607632 IL1R1P14778 569 aa17.95■□□□□ 0.46
PRDM16-210ENST00000607632 MTX1Q13505 466 aa17.95■□□□□ 0.46
PRDM16-210ENST00000607632 LRRC24Q50LG9 513 aa17.95■□□□□ 0.46
PRDM16-210ENST00000607632 FRAT1Q92837 279 aaPredicted RBP17.95■□□□□ 0.46
PRDM16-210ENST00000607632 CREBZFQ9NS37 354 aa17.95■□□□□ 0.46
PRDM16-210ENST00000607632 LRRFIP2Q9Y608 721 aaKnown RBP17.95■□□□□ 0.46
PRDM16-210ENST00000607632 MYO3BQ8WXR4 1341 aa17.95■□□□□ 0.46
PRDM16-210ENST00000607632 EGFRP00533 1210 aa17.94■□□□□ 0.46
PRDM16-210ENST00000607632 HTRA3P83110 453 aa17.94■□□□□ 0.46
PRDM16-210ENST00000607632 KLHDC4Q8TBB5 520 aa17.94■□□□□ 0.46
PRDM16-210ENST00000607632 EYA2O00167 538 aa17.93■□□□□ 0.46
PRDM16-210ENST00000607632 PDE8BO95263 885 aa17.93■□□□□ 0.46
PRDM16-210ENST00000607632 MMP14P50281 582 aa17.93■□□□□ 0.46
PRDM16-210ENST00000607632 SAMD7Q7Z3H4 446 aa17.93■□□□□ 0.46
PRDM16-210ENST00000607632 CIAO1O76071 339 aa17.92■□□□□ 0.46
PRDM16-210ENST00000607632 FGFR2P21802 821 aa17.92■□□□□ 0.46
PRDM16-210ENST00000607632 FKBP1AP62942 108 aaKnown RBP17.92■□□□□ 0.46
PRDM16-210ENST00000607632 ATG9AQ7Z3C6 839 aa17.92■□□□□ 0.46
PRDM16-210ENST00000607632 ZNF804AQ7Z570 1209 aa17.92■□□□□ 0.46
PRDM16-210ENST00000607632 TMEM57Q8N5G2 664 aa17.92■□□□□ 0.46
PRDM16-210ENST00000607632 CLUAP1Q96AJ1 413 aa17.92■□□□□ 0.46
PRDM16-210ENST00000607632 KLRG1Q96E93 195 aa17.92■□□□□ 0.46
PRDM16-210ENST00000607632 COPRSQ9NQ92 184 aa17.92■□□□□ 0.46
PRDM16-210ENST00000607632 ARAP2Q8WZ64 1704 aa17.92■□□□□ 0.46
PRDM16-210ENST00000607632 PLIN1O60240 522 aa17.91■□□□□ 0.46
PRDM16-210ENST00000607632 USP17L8P0C7I0 530 aa17.91■□□□□ 0.46
PRDM16-210ENST00000607632 KIF4BQ2VIQ3 1234 aa17.91■□□□□ 0.46
PRDM16-210ENST00000607632 TBC1D10BQ4KMP7 808 aaPredicted RBP17.91■□□□□ 0.46
PRDM16-210ENST00000607632 TTLL5Q6EMB2 1281 aa17.91■□□□□ 0.46
PRDM16-210ENST00000607632 JMYQ8N9B5 988 aa17.91■□□□□ 0.46
PRDM16-210ENST00000607632 TDRD7Q8NHU6 1098 aaKnown RBP17.91■□□□□ 0.46
PRDM16-210ENST00000607632 FAM84BQ96KN1 310 aaPredicted RBP17.91■□□□□ 0.46
PRDM16-210ENST00000607632 FAM205AQ6ZU69 1335 aa17.91■□□□□ 0.46
PRDM16-210ENST00000607632 TMEM88BA6NKF7 163 aa17.9■□□□□ 0.46
PRDM16-210ENST00000607632 METTL24Q5JXM2 366 aa17.9■□□□□ 0.46
PRDM16-210ENST00000607632 FBXO33Q7Z6M2 555 aa17.9■□□□□ 0.46
PRDM16-210ENST00000607632 POLR2AP24928 1970 aaKnown RBP17.9■□□□□ 0.46
PRDM16-210ENST00000607632 RLBP1P12271 317 aa17.89■□□□□ 0.45
PRDM16-210ENST00000607632 GTF2IP78347 998 aa17.89■□□□□ 0.45
PRDM16-210ENST00000607632 DZIP1LQ8IYY4 767 aaKnown RBP17.89■□□□□ 0.45
PRDM16-210ENST00000607632 MXD3Q9BW11 206 aa17.89■□□□□ 0.45
PRDM16-210ENST00000607632 MYOZ2Q9NPC6 264 aa17.89■□□□□ 0.45
PRDM16-210ENST00000607632 ZBTB22O15209 634 aa17.88■□□□□ 0.45
PRDM16-210ENST00000607632 SASH1O94885 1247 aa17.88■□□□□ 0.45
PRDM16-210ENST00000607632 GNAI2P04899 355 aa17.88■□□□□ 0.45
PRDM16-210ENST00000607632 HIBADHP31937 336 aaKnown RBP17.88■□□□□ 0.45
PRDM16-210ENST00000607632 CDC37L1Q7L3B6 337 aa17.88■□□□□ 0.45
PRDM16-210ENST00000607632 CERS5Q8N5B7 392 aa17.88■□□□□ 0.45
PRDM16-210ENST00000607632 TRAF5O00463 557 aa17.87■□□□□ 0.45
PRDM16-210ENST00000607632 GYG1P46976 350 aa17.87■□□□□ 0.45
PRDM16-210ENST00000607632 FMR1Q06787 632 aaKnown RBP eCLIP17.87■□□□□ 0.45
PRDM16-210ENST00000607632 PUM3Q15397 648 aaKnown RBP17.87■□□□□ 0.45
PRDM16-210ENST00000607632 CST9Q5W186 159 aa17.87■□□□□ 0.45
PRDM16-210ENST00000607632 ZBED3Q96IU2 234 aaPredicted RBP17.87■□□□□ 0.45
PRDM16-210ENST00000607632 GLIS2Q9BZE0 524 aaPredicted RBP17.87■□□□□ 0.45
PRDM16-210ENST00000607632 PITPNM2Q9BZ72 1349 aa17.87■□□□□ 0.45
PRDM16-210ENST00000607632 CNTNAP1P78357 1384 aa17.87■□□□□ 0.45
PRDM16-210ENST00000607632 RASSF10A6NK89 507 aa17.86■□□□□ 0.45
PRDM16-210ENST00000607632 ZBTB7BO15156 539 aaPredicted RBP17.86■□□□□ 0.45
PRDM16-210ENST00000607632 IL15P40933 162 aaPredicted RBP17.86■□□□□ 0.45
PRDM16-210ENST00000607632 LPIN2Q92539 896 aa17.86■□□□□ 0.45
PRDM16-210ENST00000607632 PA2G4Q9UQ80 394 aaKnown RBP17.86■□□□□ 0.45
PRDM16-210ENST00000607632 ECM29Q5VYK3 1845 aa17.86■□□□□ 0.45
PRDM16-210ENST00000607632 SRGAP3O43295 1099 aa17.85■□□□□ 0.45
PRDM16-210ENST00000607632 ASTN2O75129 1339 aaPredicted RBP17.85■□□□□ 0.45
PRDM16-210ENST00000607632 RBM26Q5T8P6 1007 aaKnown RBP17.85■□□□□ 0.45
PRDM16-210ENST00000607632 FTSJ3Q8IY81 847 aaKnown RBP17.85■□□□□ 0.45
PRDM16-210ENST00000607632 OGFOD1Q8N543 542 aa17.85■□□□□ 0.45
PRDM16-210ENST00000607632 MTMR14Q8NCE2 650 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms