RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PMFBP1Q8TBY8 1022 aa7.65□□□□□ -1.18
LINC00397-202ENST00000606785 SPON2Q9BUD6 331 aa7.65□□□□□ -1.18
LINC00397-202ENST00000606785 KRTAP4-8Q9BYQ9 185 aa7.65□□□□□ -1.18
LINC00397-202ENST00000606785 GSX2Q9BZM3 304 aa7.65□□□□□ -1.18
LINC00397-202ENST00000606785 SALL4Q9UJQ4 1053 aa7.65□□□□□ -1.18
LINC00397-202ENST00000606785 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.65□□□□□ -1.18
LINC00397-202ENST00000606785 EFSO43281 561 aa7.64□□□□□ -1.19
LINC00397-202ENST00000606785 ITGA6P23229 1130 aa7.64□□□□□ -1.19
LINC00397-202ENST00000606785 SFSWAPQ12872 951 aaKnown RBP7.64□□□□□ -1.19
LINC00397-202ENST00000606785 SV2AQ7L0J3 742 aa7.64□□□□□ -1.19
LINC00397-202ENST00000606785 KRT25Q7Z3Z0 450 aa7.64□□□□□ -1.19
LINC00397-202ENST00000606785 RELL1Q8IUW5 271 aa7.64□□□□□ -1.19
LINC00397-202ENST00000606785 KIAA0825Q8IV33 1275 aa7.64□□□□□ -1.19
LINC00397-202ENST00000606785 OXCT2Q9BYC2 517 aaPredicted RBP7.64□□□□□ -1.19
LINC00397-202ENST00000606785 ABCB6Q9NP58 842 aa7.64□□□□□ -1.19
LINC00397-202ENST00000606785 TMEM238LA0A1B0GVL6 79 aa7.63□□□□□ -1.19
LINC00397-202ENST00000606785 ATXN7O15265 892 aaPredicted RBP7.63□□□□□ -1.19
LINC00397-202ENST00000606785 RARAP10276 462 aa7.63□□□□□ -1.19
LINC00397-202ENST00000606785 RLBP1P12271 317 aa7.63□□□□□ -1.19
LINC00397-202ENST00000606785 MAP3K10Q02779 954 aa7.63□□□□□ -1.19
LINC00397-202ENST00000606785 SEC16BQ96JE7 1060 aa7.63□□□□□ -1.19
LINC00397-202ENST00000606785 LIN7BQ9HAP6 207 aa7.63□□□□□ -1.19
LINC00397-202ENST00000606785 PCDHGC4Q9Y5F7 938 aa7.63□□□□□ -1.19
LINC00397-202ENST00000606785 SENP3-EIF4A1A0A087X0R7 540 aa7.62□□□□□ -1.19
LINC00397-202ENST00000606785 LAMC2Q13753 1193 aa7.62□□□□□ -1.19
LINC00397-202ENST00000606785 PLA2G4EQ3MJ16 856 aa7.62□□□□□ -1.19
LINC00397-202ENST00000606785 DTHD1Q6ZMT9 781 aa7.62□□□□□ -1.19
LINC00397-202ENST00000606785 SV2BQ7L1I2 683 aa7.62□□□□□ -1.19
LINC00397-202ENST00000606785 VWA5B2Q8N398 1253 aa7.62□□□□□ -1.19
LINC00397-202ENST00000606785 TMEM74Q96NL1 305 aa7.62□□□□□ -1.19
LINC00397-202ENST00000606785 ZFYVE1Q9HBF4 777 aa7.62□□□□□ -1.19
LINC00397-202ENST00000606785 ZFATQ9P243 1243 aa7.62□□□□□ -1.19
LINC00397-202ENST00000606785 ADAMTS1Q9UHI8 967 aa7.62□□□□□ -1.19
LINC00397-202ENST00000606785 AKAP2Q9Y2D5 859 aa7.62□□□□□ -1.19
LINC00397-202ENST00000606785 TMA7Q9Y2S6 64 aaKnown RBP7.62□□□□□ -1.19
LINC00397-202ENST00000606785 KHNYNO15037 678 aaKnown RBP7.61□□□□□ -1.19
LINC00397-202ENST00000606785 KIF4AO95239 1232 aa7.61□□□□□ -1.19
LINC00397-202ENST00000606785 ADAMTS2O95450 1211 aa7.61□□□□□ -1.19
LINC00397-202ENST00000606785 GBP2P32456 591 aaPredicted RBP7.61□□□□□ -1.19
LINC00397-202ENST00000606785 SOX18P35713 384 aa7.61□□□□□ -1.19
LINC00397-202ENST00000606785 EIF4A3P38919 411 aaKnown RBP7.61□□□□□ -1.19
LINC00397-202ENST00000606785 NCAPG2Q86XI2 1143 aa7.61□□□□□ -1.19
LINC00397-202ENST00000606785 CCNJLQ8IV13 435 aa7.61□□□□□ -1.19
LINC00397-202ENST00000606785 PNMA5Q96PV4 448 aa7.61□□□□□ -1.19
LINC00397-202ENST00000606785 TCF12Q99081 682 aa7.61□□□□□ -1.19
LINC00397-202ENST00000606785 SPOCK3Q9BQ16 436 aa7.61□□□□□ -1.19
LINC00397-202ENST00000606785 TRIM56Q9BRZ2 755 aaKnown RBP7.61□□□□□ -1.19
LINC00397-202ENST00000606785 OSBPL2Q9H1P3 480 aa7.61□□□□□ -1.19
LINC00397-202ENST00000606785 ZSWIM4Q9H7M6 989 aa7.61□□□□□ -1.19
LINC00397-202ENST00000606785 EFCC1Q9HA90 598 aa7.61□□□□□ -1.19
LINC00397-202ENST00000606785 TLDC2A0PJX2 215 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 DCDC2BA2VCK2 349 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 CDC14CA4D256 554 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 MINDY4BA8MYZ0 360 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 PSAPP07602 524 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 THBS1P07996 1170 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 HOXD8P13378 290 aaPredicted RBP7.6□□□□□ -1.19
LINC00397-202ENST00000606785 NFKB1P19838 968 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 SRSF11Q05519 484 aaKnown RBP7.6□□□□□ -1.19
LINC00397-202ENST00000606785 TNP2Q05952 138 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 HYAL2Q12891 473 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 LYPD4Q6UWN0 246 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 OSMRQ99650 979 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 ZKSCAN3Q9BRR0 538 aa7.6□□□□□ -1.19
LINC00397-202ENST00000606785 TLR7Q9NYK1 1049 aaKnown RBP7.6□□□□□ -1.19
LINC00397-202ENST00000606785 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.6□□□□□ -1.19
LINC00397-202ENST00000606785 F6X3S4 739 aa7.59□□□□□ -1.19
LINC00397-202ENST00000606785 FBXO24O75426 580 aa7.59□□□□□ -1.19
LINC00397-202ENST00000606785 MAP3K6O95382 1288 aa7.59□□□□□ -1.19
LINC00397-202ENST00000606785 MAPTP10636 758 aaKnown RBP7.59□□□□□ -1.19
LINC00397-202ENST00000606785 UBAP2LQ14157 1087 aaKnown RBP7.59□□□□□ -1.19
LINC00397-202ENST00000606785 COL13A1Q5TAT6 717 aaPredicted RBP7.59□□□□□ -1.19
LINC00397-202ENST00000606785 RHOVQ96L33 236 aa7.59□□□□□ -1.19
LINC00397-202ENST00000606785 CEP44Q9C0F1 390 aa7.59□□□□□ -1.19
LINC00397-202ENST00000606785 PIF1Q9H611 641 aa7.59□□□□□ -1.19
LINC00397-202ENST00000606785 KCNQ5Q9NR82 932 aa7.59□□□□□ -1.19
LINC00397-202ENST00000606785 STRN4Q9NRL3 753 aa7.59□□□□□ -1.19
LINC00397-202ENST00000606785 ENAMQ9NRM1 1142 aa7.59□□□□□ -1.19
LINC00397-202ENST00000606785 SSBP05455 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
LINC00397-202ENST00000606785 NCLP19338 710 aaKnown RBP7.58□□□□□ -1.2
LINC00397-202ENST00000606785 PLAURQ03405 335 aa7.58□□□□□ -1.2
LINC00397-202ENST00000606785 SPEM2Q0P670 501 aa7.58□□□□□ -1.2
LINC00397-202ENST00000606785 NBPF6Q5VWK0 638 aa7.58□□□□□ -1.2
LINC00397-202ENST00000606785 TPTE2Q6XPS3 522 aa7.58□□□□□ -1.2
LINC00397-202ENST00000606785 RIPOR1Q6ZS17 1223 aa7.58□□□□□ -1.2
LINC00397-202ENST00000606785 CKAP2LQ8IYA6 745 aa7.58□□□□□ -1.2
LINC00397-202ENST00000606785 PHC3Q8NDX5 983 aa7.58□□□□□ -1.2
LINC00397-202ENST00000606785 ZNF296Q8WUU4 475 aaPredicted RBP7.58□□□□□ -1.2
LINC00397-202ENST00000606785 EAF1Q96JC9 268 aaPredicted RBP7.58□□□□□ -1.2
LINC00397-202ENST00000606785 DCAF5Q96JK2 942 aa7.58□□□□□ -1.2
LINC00397-202ENST00000606785 NBPF4Q96M43 638 aa7.58□□□□□ -1.2
LINC00397-202ENST00000606785 NUCKS1Q9H1E3 243 aaKnown RBP7.58□□□□□ -1.2
LINC00397-202ENST00000606785 MARK1Q9P0L2 795 aa7.58□□□□□ -1.2
LINC00397-202ENST00000606785 H7C1W4 665 aa7.57□□□□□ -1.2
LINC00397-202ENST00000606785 PROCP04070 461 aa7.57□□□□□ -1.2
LINC00397-202ENST00000606785 CELA2BP08218 269 aaPredicted RBP7.57□□□□□ -1.2
LINC00397-202ENST00000606785 ACPPP15309 386 aa7.57□□□□□ -1.2
LINC00397-202ENST00000606785 CDK11BP21127 795 aaKnown RBP7.57□□□□□ -1.2
LINC00397-202ENST00000606785 ITPKAP23677 461 aa7.57□□□□□ -1.2
LINC00397-202ENST00000606785 NASPP49321 788 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms