RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 MAP3K10Q02779 954 aa8.21□□□□□ -1.1
HMGB1P51-201ENST00000605166 SRSF11Q05519 484 aaKnown RBP8.21□□□□□ -1.1
HMGB1P51-201ENST00000605166 ZNF837Q96EG3 531 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P51-201ENST00000605166 OXCT2Q9BYC2 517 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P51-201ENST00000605166 NUCKS1Q9H1E3 243 aaKnown RBP8.21□□□□□ -1.1
HMGB1P51-201ENST00000605166 ZSWIM4Q9H7M6 989 aa8.21□□□□□ -1.1
HMGB1P51-201ENST00000605166 ABCB6Q9NP58 842 aa8.21□□□□□ -1.1
HMGB1P51-201ENST00000605166 ADAMTS1Q9UHI8 967 aa8.21□□□□□ -1.1
HMGB1P51-201ENST00000605166 TMEM238LA0A1B0GVL6 79 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 EFSO43281 561 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 MMP20O60882 483 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 SLURP2P0DP57 97 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 RNFT1Q5M7Z0 435 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 FIGNL1Q6PIW4 674 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 SV2BQ7L1I2 683 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 TMEM74Q96NL1 305 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 GSX2Q9BZM3 304 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 PIF1Q9H611 641 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 LIN7BQ9HAP6 207 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 PHF24Q9UPV7 400 aa8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P51-201ENST00000605166 RARAP10276 462 aa8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 TARSP26639 723 aaKnown RBP8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 GBP2P32456 591 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 EIF4A3P38919 411 aaKnown RBP8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 NBPF6Q5VWK0 638 aa8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 DTHD1Q6ZMT9 781 aa8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 KRT25Q7Z3Z0 450 aa8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 CKAP2LQ8IYA6 745 aa8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 GTPBP3Q969Y2 492 aaKnown RBP8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 NBPF4Q96M43 638 aa8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 TRIM56Q9BRZ2 755 aaKnown RBP8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 ZFYVE1Q9HBF4 777 aa8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 MBIPQ9NS73 344 aa8.19□□□□□ -1.1
HMGB1P51-201ENST00000605166 ANKRD62A6NC57 917 aa8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 ATXN7O15265 892 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 KIF4AO95239 1232 aa8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 SSBP05455 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 SOX18P35713 384 aa8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 SFSWAPQ12872 951 aaKnown RBP8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 LAMC2Q13753 1193 aa8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 SVOPQ8N4V2 548 aa8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 TCF12Q99081 682 aa8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 EFCC1Q9HA90 598 aa8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 KCNQ5Q9NR82 932 aa8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 ENAMQ9NRM1 1142 aa8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 AKAP2Q9Y2D5 859 aa8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 TBX22Q9Y458 520 aa8.18□□□□□ -1.1
HMGB1P51-201ENST00000605166 MINDY4BA8MYZ0 360 aa8.17□□□□□ -1.1
HMGB1P51-201ENST00000605166 PPM1GO15355 546 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P51-201ENST00000605166 ADAMTS2O95450 1211 aa8.17□□□□□ -1.1
HMGB1P51-201ENST00000605166 PSAPP07602 524 aa8.17□□□□□ -1.1
HMGB1P51-201ENST00000605166 HOXD8P13378 290 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P51-201ENST00000605166 COL9A2Q14055 689 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P51-201ENST00000605166 CCNJLQ8IV13 435 aa8.17□□□□□ -1.1
HMGB1P51-201ENST00000605166 RHOVQ96L33 236 aa8.17□□□□□ -1.1
HMGB1P51-201ENST00000605166 ZFATQ9P243 1243 aa8.17□□□□□ -1.1
HMGB1P51-201ENST00000605166 STRIP2Q9ULQ0 834 aa8.17□□□□□ -1.1
HMGB1P51-201ENST00000605166 PCDHGC4Q9Y5F7 938 aa8.17□□□□□ -1.1
HMGB1P51-201ENST00000605166 NASPP49321 788 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 NFE2L2Q16236 605 aa8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 SDE2Q6IQ49 451 aa8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 ZNF746Q6NUN9 644 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 NCAPG2Q86XI2 1143 aa8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 ZNF296Q8WUU4 475 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 EAF1Q96JC9 268 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 PNMA5Q96PV4 448 aa8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 ZKSCAN3Q9BRR0 538 aa8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 NT5C1AQ9BXI3 368 aa8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 CEP44Q9C0F1 390 aa8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 TLR7Q9NYK1 1049 aaKnown RBP8.16□□□□□ -1.1
HMGB1P51-201ENST00000605166 F6X3S4 739 aa8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 GPR25O00155 361 aa8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 KHNYNO15037 678 aaKnown RBP8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 MAP3K6O95382 1288 aa8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 MX2P20592 715 aa8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 HYAL2Q12891 473 aa8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 PHC3Q8NDX5 983 aa8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 OSMRQ99650 979 aa8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 EFR3BQ9Y2G0 817 aa8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 SUPT16HQ9Y5B9 1047 aaKnown RBP8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P51-201ENST00000605166 DCDC2BA2VCK2 349 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 RNF225M0QZC1 329 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 FBXO24O75426 580 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 NFKB1P19838 968 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 ITPKAP23677 461 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 SOX9P48436 509 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 LIG3P49916 1009 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 PLAURQ03405 335 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 TNP2Q05952 138 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 SERINC3Q13530 473 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 GAS6Q14393 721 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 BMS1Q14692 1282 aaKnown RBP8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 FBXL19Q6PCT2 694 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 TPTE2Q6XPS3 522 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 GINM1Q9NU53 330 aa8.14□□□□□ -1.11
HMGB1P51-201ENST00000605166 GREM1O60565 184 aa8.13□□□□□ -1.11
HMGB1P51-201ENST00000605166 THBS1P07996 1170 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms