RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	ASXL3	Q9C0F0	2248 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624		H0YC42	278 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CIB2	O75838	187 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FOSL2	P15408	326 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KRT85	P78386	507 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SPATA17	Q96L03	361 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	AK9	Q5TCS8	1911 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HNRNPCL2	B2RXH8	293 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KIF2A	O00139	706 aa	Predicted RBP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HNRNPCL1	O60812	293 aa	Known RBP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NUCB1	Q02818	461 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NLRP9	Q7RTR0	991 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MRFAP1	Q9Y605	127 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HMGB1	P09429	215 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PPARD	Q03181	441 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PDZD8	Q8NEN9	1154 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MTUS1	Q9ULD2	1270 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GABPA	Q06546	454 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PDE3B	Q13370	1112 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	LARP1B	Q659C4	914 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SPDL1	Q96EA4	605 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	DDX19B	Q9UMR2	479 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TOP1	P11387	765 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	BLVRA	P53004	296 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SLMAP	Q14BN4	828 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	LRRC23	Q53EV4	343 aa	Predicted RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GGT6	Q6P531	493 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SYCP3	Q8IZU3	236 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PIK3R5	Q8WYR1	880 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	IFT74	Q96LB3	600 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GRPEL1	Q9HAV7	217 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	LIMCH1	Q9UPQ0	1083 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ATP2A1	O14983	1001 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CAST	P20810	708 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PMS1	P54277	932 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	LACTB	P83111	547 aa	Predicted RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FKBP4	Q02790	459 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TTLL12	Q14166	644 aa	Predicted RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CRBN	Q96SW2	442 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TSG101	Q99816	390 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	UBAC1	Q9BSL1	405 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PLVAP	Q9BX97	442 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NUCKS1	Q9H1E3	243 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KCNK9	Q9NPC2	374 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NOL7	Q9UMY1	257 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CLNS1A	P54105	237 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PHACTR2	O75167	634 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NOP9	Q86U38	636 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SYTL2	Q9HCH5	934 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CNNM1	Q9NRU3	951 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CPS1	P31327	1500 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SMG6	Q86US8	1419 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FAM13A	O94988	1023 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	LMNA	P02545	664 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	APOE	P02649	317 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GRM1	Q13255	1194 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PPP2R5D	Q14738	602 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TAOK1	Q7L7X3	1001 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	WAPL	Q7Z5K2	1190 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SAMD15	Q9P1V8	674 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CIZ1	Q9ULV3	898 aa	Predicted RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	RFX1	P22670	979 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	RBBP5	Q15291	538 aa	Known RBP	4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TAF12	Q16514	161 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	AFAP1L1	Q8TED9	768 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	VTI1A	Q96AJ9	217 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	EBAG9	O00559	213 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GAS8	O95995	478 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MCUR1	Q96AQ8	359 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CLIP2	Q9UDT6	1046 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	WWC3	Q9ULE0	1092 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KIF24	Q5T7B8	1368 aa		4.63	□□□□□ -1.67
KCNMA1-223	ENST00000604624	USP32	Q8NFA0	1604 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ESPN	B1AK53	854 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	OPHN1	O60890	802 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ATP2A2	P16615	1042 aa	Known RBP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KLHDC4	Q8TBB5	520 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PLEKHG1	Q9ULL1	1385 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GJC2	Q5T442	439 aa	Predicted RBP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	UBE3B	Q7Z3V4	1068 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HVCN1	Q96D96	273 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HEATR1	Q9H583	2144 aa	Known RBP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	WDHD1	O75717	1129 aa	Predicted RBP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	LMNTD2	Q8IXW0	634 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TMEM57	Q8N5G2	664 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	UTP14A	Q9BVJ6	771 aa	Known RBP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	VCX3A	Q9NNX9	186 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FAM169A	Q9Y6X4	670 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ZBBX	A8MT70	800 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GBP1	P32455	592 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ZNF131	P52739	623 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MSANTD4	Q8NCY6	345 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MRRF	Q96E11	262 aa	Known RBP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GCK	P35557	465 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MAP2K2	P36507	400 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TTC39A	Q5SRH9	613 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NACAP1	Q9BZK3	213 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ARFGAP3	Q9NP61	516 aa		4.62	□□□□□ -1.67

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