RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 A0A0G2JLW4 131 aa22.64■■□□□ 1.21
SSBP4-212ENST00000601919 TRIM6-TRIM34B2RNG4 842 aa22.64■■□□□ 1.21
SSBP4-212ENST00000601919 GSPT1P15170 499 aaKnown RBP22.64■■□□□ 1.21
SSBP4-212ENST00000601919 CNTROBQ8N137 903 aa22.64■■□□□ 1.21
SSBP4-212ENST00000601919 GNL3LQ9NVN8 582 aaKnown RBP22.64■■□□□ 1.21
SSBP4-212ENST00000601919 PIM2Q9P1W9 311 aa22.64■■□□□ 1.21
SSBP4-212ENST00000601919 KIAA1551Q9HCM1 1747 aa22.63■■□□□ 1.21
SSBP4-212ENST00000601919 VPS37DQ86XT2 251 aa22.63■■□□□ 1.21
SSBP4-212ENST00000601919 KLHL34Q8N239 644 aa22.63■■□□□ 1.21
SSBP4-212ENST00000601919 MPNDQ8N594 471 aa22.63■■□□□ 1.21
SSBP4-212ENST00000601919 UFL1O94874 794 aa22.62■■□□□ 1.21
SSBP4-212ENST00000601919 SDSP20132 328 aa22.62■■□□□ 1.21
SSBP4-212ENST00000601919 CCDC102BQ68D86 513 aa22.62■■□□□ 1.21
SSBP4-212ENST00000601919 C15orf52Q6ZUT6 534 aaKnown RBP22.62■■□□□ 1.21
SSBP4-212ENST00000601919 HAUS7Q99871 368 aa22.62■■□□□ 1.21
SSBP4-212ENST00000601919 BOLA2Q9H3K6 86 aa22.62■■□□□ 1.21
SSBP4-212ENST00000601919 SNAP23O00161 211 aa22.61■■□□□ 1.21
SSBP4-212ENST00000601919 SOCS7O14512 581 aa22.61■■□□□ 1.21
SSBP4-212ENST00000601919 KCNA3P22001 575 aa22.61■■□□□ 1.21
SSBP4-212ENST00000601919 LTBP1Q14766 1721 aa22.61■■□□□ 1.21
SSBP4-212ENST00000601919 SOGA3Q5TF21 947 aa22.61■■□□□ 1.21
SSBP4-212ENST00000601919 DPP8Q6V1X1 898 aaPredicted RBP22.61■■□□□ 1.21
SSBP4-212ENST00000601919 ARID4AP29374 1257 aaPredicted RBP22.6■■□□□ 1.21
SSBP4-212ENST00000601919 CASC1Q6TDU7 716 aa22.6■■□□□ 1.21
SSBP4-212ENST00000601919 RILPL2Q969X0 211 aa22.6■■□□□ 1.21
SSBP4-212ENST00000601919 EVI5LQ96CN4 794 aa22.6■■□□□ 1.21
SSBP4-212ENST00000601919 BRCA1P38398 1863 aaKnown RBP22.6■■□□□ 1.21
SSBP4-212ENST00000601919 C6orf229H3BNL8 230 aa22.59■■□□□ 1.21
SSBP4-212ENST00000601919 PHKA1P46020 1223 aa22.59■■□□□ 1.21
SSBP4-212ENST00000601919 DALRD3Q5D0E6 543 aaKnown RBP22.59■■□□□ 1.21
SSBP4-212ENST00000601919 TBC1D16Q8TBP0 767 aa22.59■■□□□ 1.21
SSBP4-212ENST00000601919 EYA3Q99504 573 aa22.59■■□□□ 1.21
SSBP4-212ENST00000601919 EIF5BO60841 1220 aaKnown RBP22.58■■□□□ 1.21
SSBP4-212ENST00000601919 CDC45O75419 566 aa22.58■■□□□ 1.21
SSBP4-212ENST00000601919 HIBADHP31937 336 aaKnown RBP22.58■■□□□ 1.21
SSBP4-212ENST00000601919 BCAMP50895 628 aa22.58■■□□□ 1.21
SSBP4-212ENST00000601919 ZNF804AQ7Z570 1209 aa22.58■■□□□ 1.21
SSBP4-212ENST00000601919 FBXO33Q7Z6M2 555 aa22.58■■□□□ 1.21
SSBP4-212ENST00000601919 SUPT20HQ8NEM7 779 aa22.58■■□□□ 1.21
SSBP4-212ENST00000601919 C7orf43Q8WVR3 580 aa22.58■■□□□ 1.21
SSBP4-212ENST00000601919 SEMA3EO15041 775 aa22.57■■□□□ 1.2
SSBP4-212ENST00000601919 GYG1P46976 350 aa22.57■■□□□ 1.2
SSBP4-212ENST00000601919 CCDC93Q567U6 631 aa22.57■■□□□ 1.2
SSBP4-212ENST00000601919 TICAM2Q86XR7 235 aa22.57■■□□□ 1.2
SSBP4-212ENST00000601919 RTKN2Q8IZC4 609 aa22.57■■□□□ 1.2
SSBP4-212ENST00000601919 FAM84BQ96KN1 310 aaPredicted RBP22.57■■□□□ 1.2
SSBP4-212ENST00000601919 DNAJC2Q99543 621 aaKnown RBP22.57■■□□□ 1.2
SSBP4-212ENST00000601919 MED23Q9ULK4 1368 aa22.57■■□□□ 1.2
SSBP4-212ENST00000601919 AKAP11Q9UKA4 1901 aa22.57■■□□□ 1.2
SSBP4-212ENST00000601919 MYH13Q9UKX3 1938 aa22.57■■□□□ 1.2
SSBP4-212ENST00000601919 ZBTB22O15209 634 aa22.56■■□□□ 1.2
SSBP4-212ENST00000601919 MAP4K4O95819 1239 aaPredicted RBP22.56■■□□□ 1.2
SSBP4-212ENST00000601919 FKBP4Q02790 459 aaKnown RBP eCLIP22.56■■□□□ 1.2
SSBP4-212ENST00000601919 PAG1Q9NWQ8 432 aa22.56■■□□□ 1.2
SSBP4-212ENST00000601919 POLLQ9UGP5 575 aa22.56■■□□□ 1.2
SSBP4-212ENST00000601919 WTIPA6NIX2 430 aaPredicted RBP22.55■■□□□ 1.2
SSBP4-212ENST00000601919 C21orf2O43822 256 aa22.55■■□□□ 1.2
SSBP4-212ENST00000601919 TTF1Q15361 905 aaPredicted RBP22.55■■□□□ 1.2
SSBP4-212ENST00000601919 LRRFIP1Q32MZ4 808 aaKnown RBP22.55■■□□□ 1.2
SSBP4-212ENST00000601919 ZC3H12CQ9C0D7 883 aaKnown RBP22.55■■□□□ 1.2
SSBP4-212ENST00000601919 ZNF219Q9P2Y4 722 aaPredicted RBP22.55■■□□□ 1.2
SSBP4-212ENST00000601919 DENND2AQ9ULE3 1009 aa22.55■■□□□ 1.2
SSBP4-212ENST00000601919 IRS2Q9Y4H2 1338 aa22.55■■□□□ 1.2
SSBP4-212ENST00000601919 HIP1O00291 1037 aa22.54■■□□□ 1.2
SSBP4-212ENST00000601919 FRAT2O75474 233 aaPredicted RBP22.54■■□□□ 1.2
SSBP4-212ENST00000601919 MCAMP43121 646 aa22.54■■□□□ 1.2
SSBP4-212ENST00000601919 SPATA5Q8NB90 893 aa22.54■■□□□ 1.2
SSBP4-212ENST00000601919 FSD1Q9BTV5 496 aa22.54■■□□□ 1.2
SSBP4-212ENST00000601919 RTFDC1Q9BY42 306 aaPredicted RBP22.54■■□□□ 1.2
SSBP4-212ENST00000601919 GOLIM4O00461 696 aa22.53■■□□□ 1.2
SSBP4-212ENST00000601919 KLRK1P26718 216 aa22.53■■□□□ 1.2
SSBP4-212ENST00000601919 WASHC4Q2M389 1173 aa22.53■■□□□ 1.2
SSBP4-212ENST00000601919 C8orf34Q49A92 452 aa22.53■■□□□ 1.2
SSBP4-212ENST00000601919 OLFM4Q6UX06 510 aa22.53■■□□□ 1.2
SSBP4-212ENST00000601919 SLC51AQ86UW1 340 aa22.53■■□□□ 1.2
SSBP4-212ENST00000601919 DUOX1Q9NRD9 1551 aa22.53■■□□□ 1.2
SSBP4-212ENST00000601919 PDS5AQ29RF7 1337 aaKnown RBP22.53■■□□□ 1.2
SSBP4-212ENST00000601919 RFX7Q2KHR2 1363 aa22.52■■□□□ 1.2
SSBP4-212ENST00000601919 RASGRF1Q13972 1273 aa22.52■■□□□ 1.2
SSBP4-212ENST00000601919 SCARF1Q14162 830 aa22.52■■□□□ 1.2
SSBP4-212ENST00000601919 KBTBD3Q8NAB2 608 aa22.52■■□□□ 1.2
SSBP4-212ENST00000601919 SNRKQ9NRH2 765 aa22.52■■□□□ 1.2
SSBP4-212ENST00000601919 HMG20BQ9P0W2 317 aa22.52■■□□□ 1.2
SSBP4-212ENST00000601919 G3V3G9 751 aa22.51■■□□□ 1.19
SSBP4-212ENST00000601919 ZAP70P43403 619 aa22.51■■□□□ 1.19
SSBP4-212ENST00000601919 DCAF8Q5TAQ9 597 aa22.51■■□□□ 1.19
SSBP4-212ENST00000601919 TBC1D9Q6ZT07 1266 aa22.51■■□□□ 1.19
SSBP4-212ENST00000601919 TXNRD3Q86VQ6 643 aa22.51■■□□□ 1.19
SSBP4-212ENST00000601919 PSMD1Q99460 953 aa22.51■■□□□ 1.19
SSBP4-212ENST00000601919 BACH2Q9BYV9 841 aa22.51■■□□□ 1.19
SSBP4-212ENST00000601919 COA1Q9GZY4 146 aa22.51■■□□□ 1.19
SSBP4-212ENST00000601919 ARFGEF1Q9Y6D6 1849 aa22.5■■□□□ 1.19
SSBP4-212ENST00000601919 RUFY2Q8WXA3 655 aa22.5■■□□□ 1.19
SSBP4-212ENST00000601919 FHDC1Q9C0D6 1143 aaPredicted RBP22.5■■□□□ 1.19
SSBP4-212ENST00000601919 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.5■■□□□ 1.193e-11■■■■■ 48.9
SSBP4-212ENST00000601919 VPS33BQ9H267 617 aa22.5■■□□□ 1.19
SSBP4-212ENST00000601919 DIAPH3Q9NSV4 1193 aa22.5■■□□□ 1.19
SSBP4-212ENST00000601919 SNED1Q8TER0 1413 aa22.49■■□□□ 1.19
SSBP4-212ENST00000601919 ZSCAN25Q6NSZ9 544 aa22.49■■□□□ 1.19
SSBP4-212ENST00000601919 TDRD7Q8NHU6 1098 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms