RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	FHOD1	Q9Y613	1164 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	PIK3C2A	O00443	1686 aa		13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	STX10	O60499	249 aa		13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ERLIN1	O75477	346 aa		13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	CMA1	P23946	247 aa		13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	TEF	Q10587	303 aa		13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ELF2	Q15723	593 aa		13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	BBX	Q8WY36	941 aa	Predicted RBP	13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ZNF592	Q92610	1267 aa		13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	YY1AP1	Q9H869	796 aa		13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ARFGAP3	Q9NP61	516 aa		13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ORC3	Q9UBD5	711 aa	Predicted RBP	13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	MKRN1	Q9UHC7	482 aa	Known RBP	13.61	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	TADA3	O75528	432 aa		13.6	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	E4F1	Q66K89	784 aa	Predicted RBP	13.6	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	NECAB1	Q8N987	351 aa		13.6	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	TRIML1	Q8N9V2	468 aa		13.6	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	FSIP1	Q8NA03	581 aa		13.6	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	IP6K1	Q92551	441 aa		13.6	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ERCC4	Q92889	916 aa	Predicted RBP	13.6	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	FBXO3	Q9UK99	471 aa		13.6	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ARHGAP23	Q9P227	1491 aa		13.6	□□□□□ -0.23
U2AF1L4-221	ENST00000601236		A6NNZ2	444 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	PPP6R2	O75170	966 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	CDKL5	O76039	1030 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	SLC3A2	P08195	630 aa	Known RBP	13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	CLCN6	P51797	869 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	TUBB8	Q3ZCM7	444 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ARHGAP29	Q52LW3	1261 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	FERMT3	Q86UX7	667 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	NSUN7	Q8NE18	718 aa	Known RBP	13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	HAUS7	Q99871	368 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	MIS18A	Q9NYP9	233 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	MYO1A	Q9UBC5	1043 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	TUBE1	Q9UJT0	475 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	EID1	Q9Y6B2	187 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ADAMTS7	Q9UKP4	1686 aa		13.59	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	FOXO3	O43524	673 aa		13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	ZFY	P08048	801 aa	Predicted RBP	13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	ME1	P48163	572 aa		13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	EXOSC10	Q01780	885 aa	Known RBP	13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	MYL5	Q02045	173 aa		13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	KANK3	Q6NY19	840 aa		13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	HOMER1	Q86YM7	354 aa		13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	CEP112	Q8N8E3	955 aa		13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	NGDN	Q8NEJ9	315 aa	Known RBP	13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	ARID3A	Q99856	593 aa		13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	ATG3	Q9NT62	314 aa		13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	TFIP11	Q9UBB9	837 aa	Known RBP	13.58	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	SMC2	O95347	1197 aa		13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	HSP90B1	P14625	803 aa	Known RBP	13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	GTF2E1	P29083	439 aa	Predicted RBP	13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	IRX5	P78411	483 aa	Predicted RBP	13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	MAP3K9	P80192	1104 aa		13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	SF3A1	Q15459	793 aa	Known RBP	13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	TMED8	Q6PL24	325 aa	Predicted RBP	13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	OLFM4	Q6UX06	510 aa		13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236		Q6ZUG5	572 aa		13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	KBTBD3	Q8NAB2	608 aa		13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	LINC00301	Q8NCQ3	95 aa		13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	GOLGA1	Q92805	767 aa		13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	CCDC51	Q96ER9	411 aa		13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	BRMS1	Q9HCU9	246 aa		13.57	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	USP5	P45974	858 aa		13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	SEMA3F	Q13275	785 aa		13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	RABL6	Q3YEC7	729 aa	Predicted RBP	13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	GORAB	Q5T7V8	394 aa		13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	CPLX2	Q6PUV4	134 aa	Known RBP	13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	SYNE3	Q6ZMZ3	975 aa		13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	NBPF11	Q86T75	865 aa		13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	MPND	Q8N594	471 aa		13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	AOPEP	Q8N6M6	819 aa		13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	RUBCN	Q92622	972 aa		13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	EAF2	Q96CJ1	260 aa	Predicted RBP	13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	RASSF4	Q9H2L5	321 aa		13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	PHAX	Q9H814	394 aa	Known RBP	13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	CHPF2	Q9P2E5	772 aa		13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	USP16	Q9Y5T5	823 aa		13.56	□□□□□ -0.24
U2AF1L4-221	ENST00000601236		A0A0D9SFI3	127 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	PTPDC1	A2A3K4	754 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	BTBD11	A6QL63	1104 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	SEMA3E	O15041	775 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	SPTLC2	O15270	562 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	SASH1	O94885	1247 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	MAP4K4	O95819	1239 aa	Predicted RBP	13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	SCRN1	Q12765	414 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	STK38	Q15208	465 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	VSTM4	Q8IW00	320 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	FBXO18	Q8NFZ0	1043 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	FAM227B	Q96M60	508 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	MED4	Q9NPJ6	270 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	ZNF446	Q9NWS9	450 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	MAP3K2	Q9Y2U5	619 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	WDR17	Q8IZU2	1322 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	CARMIL3	Q8ND23	1372 aa		13.55	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	CAMTA1	Q9Y6Y1	1673 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms