RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 WDR63Q8IWG1 891 aa23.04■■□□□ 1.28
CHMP2A-208ENST00000601220 DNAAF4Q8WXU2 420 aa23.04■■□□□ 1.28
CHMP2A-208ENST00000601220 CDCA5Q96FF9 252 aa23.04■■□□□ 1.28
CHMP2A-208ENST00000601220 MRS2Q9HD23 443 aa23.04■■□□□ 1.28
CHMP2A-208ENST00000601220 LINS1Q8NG48 757 aa23.03■■□□□ 1.28
CHMP2A-208ENST00000601220 MXD3Q9BW11 206 aa23.03■■□□□ 1.28
CHMP2A-208ENST00000601220 POLR2AP24928 1970 aaKnown RBP23.02■■□□□ 1.28
CHMP2A-208ENST00000601220 ITGA6P23229 1130 aa23.02■■□□□ 1.28
CHMP2A-208ENST00000601220 CCDC102AQ96A19 550 aa23.02■■□□□ 1.28
CHMP2A-208ENST00000601220 SPINK5Q9NQ38 1064 aaPredicted RBP23.02■■□□□ 1.28
CHMP2A-208ENST00000601220 LEMD3Q9Y2U8 911 aa23.02■■□□□ 1.28
CHMP2A-208ENST00000601220 PSME4Q14997 1843 aa23.01■■□□□ 1.27
CHMP2A-208ENST00000601220 FKBP5Q13451 457 aaPredicted RBP23.01■■□□□ 1.27
CHMP2A-208ENST00000601220 FAM161AQ3B820 660 aa23.01■■□□□ 1.27
CHMP2A-208ENST00000601220 COA1Q9GZY4 146 aa23.01■■□□□ 1.27
CHMP2A-208ENST00000601220 PITPNM2Q9BZ72 1349 aa23.01■■□□□ 1.27
CHMP2A-208ENST00000601220 KLRK1P26718 216 aa23■■□□□ 1.27
CHMP2A-208ENST00000601220 IGHMBP2P38935 993 aaKnown RBP23■■□□□ 1.27
CHMP2A-208ENST00000601220 ZNF157P51786 506 aaPredicted RBP23■■□□□ 1.27
CHMP2A-208ENST00000601220 KIF23Q02241 960 aaPredicted RBP23■■□□□ 1.27
CHMP2A-208ENST00000601220 EXOSC9Q06265 439 aaKnown RBP23■■□□□ 1.27
CHMP2A-208ENST00000601220 STRIP1Q5VSL9 837 aa23■■□□□ 1.27
CHMP2A-208ENST00000601220 SALL2Q9Y467 1007 aaPredicted RBP23■■□□□ 1.27
CHMP2A-208ENST00000601220 SLC10A3P09131 477 aa22.99■■□□□ 1.27
CHMP2A-208ENST00000601220 NBPF9Q3BBW0 867 aa22.99■■□□□ 1.27
CHMP2A-208ENST00000601220 MYH16Q9H6N6 1097 aa22.99■■□□□ 1.27
CHMP2A-208ENST00000601220 ZNF804BA4D1E1 1349 aa22.99■■□□□ 1.27
CHMP2A-208ENST00000601220 FOXO4P98177 505 aa22.98■■□□□ 1.27
CHMP2A-208ENST00000601220 ANKRD2Q9GZV1 360 aa22.98■■□□□ 1.27
CHMP2A-208ENST00000601220 SCAF8Q9UPN6 1271 aaKnown RBP22.98■■□□□ 1.27
CHMP2A-208ENST00000601220 IRS2Q9Y4H2 1338 aa22.98■■□□□ 1.27
CHMP2A-208ENST00000601220 BEND3Q5T5X7 828 aa22.97■■□□□ 1.27
CHMP2A-208ENST00000601220 CSRNP1Q96S65 589 aa22.97■■□□□ 1.27
CHMP2A-208ENST00000601220 MCOLN1Q9GZU1 580 aa22.97■■□□□ 1.27
CHMP2A-208ENST00000601220 SAGE1Q9NXZ1 904 aa22.97■■□□□ 1.27
CHMP2A-208ENST00000601220 ZNF646O15015 1829 aaPredicted RBP22.96■■□□□ 1.27
CHMP2A-208ENST00000601220 MYH3P11055 1940 aa22.96■■□□□ 1.27
CHMP2A-208ENST00000601220 F6X3S4 739 aa22.96■■□□□ 1.27
CHMP2A-208ENST00000601220 WNT10BO00744 389 aa22.96■■□□□ 1.27
CHMP2A-208ENST00000601220 FKBP1BP68106 108 aa22.96■■□□□ 1.27
CHMP2A-208ENST00000601220 CHRNDQ07001 517 aa22.96■■□□□ 1.27
CHMP2A-208ENST00000601220 MPHOSPH8Q99549 860 aa22.96■■□□□ 1.27
CHMP2A-208ENST00000601220 RNF186Q9NXI6 227 aa22.96■■□□□ 1.27
CHMP2A-208ENST00000601220 ANP32CO43423 234 aa22.95■■□□□ 1.26
CHMP2A-208ENST00000601220 RASAL3Q86YV0 1011 aa22.95■■□□□ 1.26
CHMP2A-208ENST00000601220 MYO3BQ8WXR4 1341 aa22.95■■□□□ 1.26
CHMP2A-208ENST00000601220 SNAP23O00161 211 aa22.94■■□□□ 1.26
CHMP2A-208ENST00000601220 PRAMEF18Q5VWM3 479 aa22.94■■□□□ 1.26
CHMP2A-208ENST00000601220 TTLL5Q6EMB2 1281 aa22.94■■□□□ 1.26
CHMP2A-208ENST00000601220 MOB2Q70IA6 237 aa22.94■■□□□ 1.26
CHMP2A-208ENST00000601220 ZBED3Q96IU2 234 aaPredicted RBP22.94■■□□□ 1.26
CHMP2A-208ENST00000601220 ANKRD18BA2A2Z9 1011 aa22.93■■□□□ 1.26
CHMP2A-208ENST00000601220 ZNF316A6NFI3 1004 aaPredicted RBP22.93■■□□□ 1.26
CHMP2A-208ENST00000601220 CCDC85CA6NKD9 419 aa22.93■■□□□ 1.26
CHMP2A-208ENST00000601220 RGS19P49795 217 aa22.93■■□□□ 1.26
CHMP2A-208ENST00000601220 MMP14P50281 582 aa22.93■■□□□ 1.26
CHMP2A-208ENST00000601220 C15orf52Q6ZUT6 534 aaKnown RBP22.93■■□□□ 1.26
CHMP2A-208ENST00000601220 OGFOD1Q8N543 542 aa22.93■■□□□ 1.26
CHMP2A-208ENST00000601220 SPEF2Q9C093 1822 aa22.93■■□□□ 1.26
CHMP2A-208ENST00000601220 TRPA1O75762 1119 aa22.92■■□□□ 1.26
CHMP2A-208ENST00000601220 EPHA10Q5JZY3 1008 aa22.92■■□□□ 1.26
CHMP2A-208ENST00000601220 FBXW7Q969H0 707 aa22.92■■□□□ 1.26
CHMP2A-208ENST00000601220 CD209Q9NNX6 404 aa22.92■■□□□ 1.26
CHMP2A-208ENST00000601220 TAF5LO75529 589 aa22.91■■□□□ 1.26
CHMP2A-208ENST00000601220 GTF2IP78347 998 aa22.91■■□□□ 1.26
CHMP2A-208ENST00000601220 CASP8AP2Q9UKL3 1982 aa22.9■■□□□ 1.26
CHMP2A-208ENST00000601220 UBE2Q2LH0YL09 131 aa22.9■■□□□ 1.26
CHMP2A-208ENST00000601220 SASH1O94885 1247 aa22.9■■□□□ 1.26
CHMP2A-208ENST00000601220 ZEB1P37275 1124 aaPredicted RBP22.9■■□□□ 1.26
CHMP2A-208ENST00000601220 DGKZQ13574 1117 aa22.9■■□□□ 1.26
CHMP2A-208ENST00000601220 KIAA0825Q8IV33 1275 aa22.9■■□□□ 1.26
CHMP2A-208ENST00000601220 HELBQ8NG08 1087 aaPredicted RBP22.9■■□□□ 1.26
CHMP2A-208ENST00000601220 PAPPA2Q9BXP8 1791 aa22.9■■□□□ 1.26
CHMP2A-208ENST00000601220 IFIT5Q13325 482 aaKnown RBP22.89■■□□□ 1.25
CHMP2A-208ENST00000601220 REM2Q8IYK8 340 aaPredicted RBP22.89■■□□□ 1.25
CHMP2A-208ENST00000601220 CERS5Q8N5B7 392 aa22.89■■□□□ 1.25
CHMP2A-208ENST00000601220 LMBR1LQ6UX01 489 aa22.88■■□□□ 1.25
CHMP2A-208ENST00000601220 GRM8O00222 908 aa22.87■■□□□ 1.25
CHMP2A-208ENST00000601220 IL1R1P14778 569 aa22.87■■□□□ 1.25
CHMP2A-208ENST00000601220 KCNJ4P48050 445 aa22.87■■□□□ 1.25
CHMP2A-208ENST00000601220 ZNF594Q96JF6 807 aaPredicted RBP22.87■■□□□ 1.25
CHMP2A-208ENST00000601220 CACNA1FO60840 1977 aa22.87■■□□□ 1.25
CHMP2A-208ENST00000601220 ZNF521Q96K83 1311 aa22.85■■□□□ 1.25
CHMP2A-208ENST00000601220 FAM9BQ8IZU0 186 aa22.85■■□□□ 1.25
CHMP2A-208ENST00000601220 MTMR14Q8NCE2 650 aa22.85■■□□□ 1.25
CHMP2A-208ENST00000601220 KAZALD1Q96I82 304 aa22.85■■□□□ 1.25
CHMP2A-208ENST00000601220 HDAC9Q9UKV0 1011 aa22.85■■□□□ 1.25
CHMP2A-208ENST00000601220 ALDH1L1O75891 902 aa22.84■■□□□ 1.25
CHMP2A-208ENST00000601220 CHMP3Q9Y3E7 222 aa22.84■■□□□ 1.25
CHMP2A-208ENST00000601220 PCDHAC2Q9Y5I4 1007 aa22.84■■□□□ 1.25
CHMP2A-208ENST00000601220 APOBEC3FQ8IUX4 373 aaKnown RBP22.83■■□□□ 1.25
CHMP2A-208ENST00000601220 TM4SF4P48230 202 aa22.82■■□□□ 1.24
CHMP2A-208ENST00000601220 FKBP1AP62942 108 aaKnown RBP22.82■■□□□ 1.24
CHMP2A-208ENST00000601220 PTPN12Q05209 780 aaKnown RBP22.82■■□□□ 1.24
CHMP2A-208ENST00000601220 CCDC57Q2TAC2 916 aa22.82■■□□□ 1.24
CHMP2A-208ENST00000601220 LDLRAD1Q5T700 205 aa22.82■■□□□ 1.24
CHMP2A-208ENST00000601220 LDHAL6AQ6ZMR3 332 aa22.82■■□□□ 1.24
CHMP2A-208ENST00000601220 NF2P35240 595 aa22.81■■□□□ 1.24
CHMP2A-208ENST00000601220 MLLT1Q03111 559 aaPredicted RBP22.81■■□□□ 1.24
CHMP2A-208ENST00000601220 TTLL12Q14166 644 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms