RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 HMMRO75330 724 aa14.66□□□□□ -0.06
FARP1-230ENST00000600380 PUM3Q15397 648 aaKnown RBP14.66□□□□□ -0.06
FARP1-230ENST00000600380 ATP2B3Q16720 1220 aa14.66□□□□□ -0.06
FARP1-230ENST00000600380 VPS33BQ9H267 617 aa14.66□□□□□ -0.06
FARP1-230ENST00000600380 DCTPP1Q9H773 170 aa14.66□□□□□ -0.06
FARP1-230ENST00000600380 DICER1Q9UPY3 1922 aaKnown RBP14.66□□□□□ -0.06
FARP1-230ENST00000600380 SCN9AQ15858 1988 aa14.65□□□□□ -0.06
FARP1-230ENST00000600380 SMARCA5O60264 1052 aaPredicted RBP14.65□□□□□ -0.06
FARP1-230ENST00000600380 ECE2O60344 883 aa14.65□□□□□ -0.06
FARP1-230ENST00000600380 RAD17O75943 681 aa14.65□□□□□ -0.06
FARP1-230ENST00000600380 BCAMP50895 628 aa14.65□□□□□ -0.06
FARP1-230ENST00000600380 CXCL9Q07325 125 aa14.65□□□□□ -0.06
FARP1-230ENST00000600380 OS9Q13438 667 aaPredicted RBP14.65□□□□□ -0.06
FARP1-230ENST00000600380 FBXO33Q7Z6M2 555 aa14.65□□□□□ -0.06
FARP1-230ENST00000600380 NIM1KQ8IY84 436 aa14.65□□□□□ -0.06
FARP1-230ENST00000600380 ZNRF3Q9ULT6 936 aa14.65□□□□□ -0.06
FARP1-230ENST00000600380 A0A1B0GUL7 405 aa14.64□□□□□ -0.07
FARP1-230ENST00000600380 HDAC1Q13547 482 aaPredicted RBP14.64□□□□□ -0.07
FARP1-230ENST00000600380 RHPN1Q8TCX5 695 aa14.64□□□□□ -0.07
FARP1-230ENST00000600380 JDP2Q8WYK2 163 aa14.64□□□□□ -0.07
FARP1-230ENST00000600380 LPIN2Q92539 896 aa14.64□□□□□ -0.07
FARP1-230ENST00000600380 EAF2Q96CJ1 260 aaPredicted RBP14.64□□□□□ -0.07
FARP1-230ENST00000600380 MXD3Q9BW11 206 aa14.64□□□□□ -0.07
FARP1-230ENST00000600380 CD209Q9NNX6 404 aa14.64□□□□□ -0.07
FARP1-230ENST00000600380 IL1RAPL2Q9NP60 686 aa14.64□□□□□ -0.07
FARP1-230ENST00000600380 TLR7Q9NYK1 1049 aaKnown RBP14.64□□□□□ -0.07
FARP1-230ENST00000600380 DDNO94850 711 aaPredicted RBP14.63□□□□□ -0.07
FARP1-230ENST00000600380 AAMPQ13685 434 aa14.63□□□□□ -0.07
FARP1-230ENST00000600380 TNNI3KQ59H18 835 aa14.63□□□□□ -0.07
FARP1-230ENST00000600380 COA1Q9GZY4 146 aa14.63□□□□□ -0.07
FARP1-230ENST00000600380 IQSEC3Q9UPP2 1182 aaPredicted RBP14.63□□□□□ -0.07
FARP1-230ENST00000600380 FPGT-TNNI3KV9GXZ4 949 aa14.63□□□□□ -0.07
FARP1-230ENST00000600380 ZNF609O15014 1411 aa14.63□□□□□ -0.07
FARP1-230ENST00000600380 TIAM2Q8IVF5 1701 aa14.63□□□□□ -0.07
FARP1-230ENST00000600380 IFIT1P09914 478 aaKnown RBP14.62□□□□□ -0.07
FARP1-230ENST00000600380 SLC5A1P13866 664 aa14.62□□□□□ -0.07
FARP1-230ENST00000600380 HIBADHP31937 336 aaKnown RBP14.62□□□□□ -0.07
FARP1-230ENST00000600380 PHKA1P46020 1223 aa14.62□□□□□ -0.07
FARP1-230ENST00000600380 XAGE2Q96GT9 111 aa14.62□□□□□ -0.07
FARP1-230ENST00000600380 DBNDD2Q9BQY9 259 aa14.62□□□□□ -0.07
FARP1-230ENST00000600380 CCDC8Q9H0W5 538 aaPredicted RBP14.62□□□□□ -0.07
FARP1-230ENST00000600380 JAG2Q9Y219 1238 aa14.62□□□□□ -0.07
FARP1-230ENST00000600380 POTECB2RU33 542 aa14.61□□□□□ -0.07
FARP1-230ENST00000600380 PSMD14O00487 310 aa14.61□□□□□ -0.07
FARP1-230ENST00000600380 IL1R1P14778 569 aa14.61□□□□□ -0.07
FARP1-230ENST00000600380 YY1P25490 414 aa14.61□□□□□ -0.07
FARP1-230ENST00000600380 TDRD7Q8NHU6 1098 aaKnown RBP14.61□□□□□ -0.07
FARP1-230ENST00000600380 ZNF526Q8TF50 670 aaPredicted RBP14.61□□□□□ -0.07
FARP1-230ENST00000600380 NEUROD6Q96NK8 337 aa14.61□□□□□ -0.07
FARP1-230ENST00000600380 BCL11AQ9H165 835 aa14.61□□□□□ -0.07
FARP1-230ENST00000600380 GPR108Q9NPR9 543 aa14.61□□□□□ -0.07
FARP1-230ENST00000600380 DBNLQ9UJU6 430 aaKnown RBP14.61□□□□□ -0.07
FARP1-230ENST00000600380 SHTN1A0MZ66 631 aa14.6□□□□□ -0.07
FARP1-230ENST00000600380 GLTPD2A6NH11 291 aa14.6□□□□□ -0.07
FARP1-230ENST00000600380 RAB11FIP3O75154 756 aa14.6□□□□□ -0.07
FARP1-230ENST00000600380 HSP90AB4PQ58FF6 505 aa14.6□□□□□ -0.07
FARP1-230ENST00000600380 CCDC102BQ68D86 513 aa14.6□□□□□ -0.07
FARP1-230ENST00000600380 ERC1Q8IUD2 1116 aa14.6□□□□□ -0.07
FARP1-230ENST00000600380 KIF1BPQ96EK5 621 aa14.6□□□□□ -0.07
FARP1-230ENST00000600380 AKAP2Q9Y2D5 859 aa14.6□□□□□ -0.07
FARP1-230ENST00000600380 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
FARP1-230ENST00000600380 GJA3Q9Y6H8 435 aa14.6□□□□□ -0.07
FARP1-230ENST00000600380 COL1A1P02452 1464 aaPredicted RBP14.6□□□□□ -0.07
FARP1-230ENST00000600380 G3V3G9 751 aa14.59□□□□□ -0.07
FARP1-230ENST00000600380 EIF6P56537 245 aaKnown RBP14.59□□□□□ -0.07
FARP1-230ENST00000600380 GTF2IP78347 998 aa14.59□□□□□ -0.07
FARP1-230ENST00000600380 SCARF1Q14162 830 aa14.59□□□□□ -0.07
FARP1-230ENST00000600380 GRIK5Q16478 980 aa14.59□□□□□ -0.07
FARP1-230ENST00000600380 DACT2Q5SW24 774 aa14.59□□□□□ -0.07
FARP1-230ENST00000600380 DCAF8Q5TAQ9 597 aa14.59□□□□□ -0.07
FARP1-230ENST00000600380 CIAPIN1Q6FI81 312 aa14.59□□□□□ -0.07
FARP1-230ENST00000600380 ZNF804AQ7Z570 1209 aa14.59□□□□□ -0.07
FARP1-230ENST00000600380 PODNQ7Z5L7 613 aa14.59□□□□□ -0.07
FARP1-230ENST00000600380 AACSQ86V21 672 aa14.59□□□□□ -0.07
FARP1-230ENST00000600380 C16orf71Q8IYS4 520 aaPredicted RBP14.59□□□□□ -0.07
FARP1-230ENST00000600380 CERS5Q8N5B7 392 aa14.59□□□□□ -0.07
FARP1-230ENST00000600380 ZC3H4Q9UPT8 1303 aaKnown RBP14.59□□□□□ -0.07
FARP1-230ENST00000600380 ZNF646O15015 1829 aaPredicted RBP14.58□□□□□ -0.08
FARP1-230ENST00000600380 VIL1P09327 827 aaKnown RBP14.58□□□□□ -0.08
FARP1-230ENST00000600380 GMPSP49915 693 aaPredicted RBP14.58□□□□□ -0.08
FARP1-230ENST00000600380 SMC5Q8IY18 1101 aa14.58□□□□□ -0.08
FARP1-230ENST00000600380 OTUD7AQ8TE49 926 aaPredicted RBP14.58□□□□□ -0.08
FARP1-230ENST00000600380 GMLQ99445 158 aa14.58□□□□□ -0.08
FARP1-230ENST00000600380 LRRCC1Q9C099 1032 aa14.58□□□□□ -0.08
FARP1-230ENST00000600380 RWDD1Q9H446 243 aaPredicted RBP14.58□□□□□ -0.08
FARP1-230ENST00000600380 NMRK2Q9NPI5 230 aa14.58□□□□□ -0.08
FARP1-230ENST00000600380 USP17L3A6NCW0 530 aa14.57□□□□□ -0.08
FARP1-230ENST00000600380 USP17L4A6NCW7 530 aa14.57□□□□□ -0.08
FARP1-230ENST00000600380 CAVIN4Q5BKX8 364 aa14.57□□□□□ -0.08
FARP1-230ENST00000600380 TTLL5Q6EMB2 1281 aa14.57□□□□□ -0.08
FARP1-230ENST00000600380 PI16Q6UXB8 463 aa14.57□□□□□ -0.08
FARP1-230ENST00000600380 USP17L1Q7RTZ2 530 aa14.57□□□□□ -0.08
FARP1-230ENST00000600380 GPC2Q8N158 579 aa14.57□□□□□ -0.08
FARP1-230ENST00000600380 ZNF784Q8NCA9 323 aaPredicted RBP14.57□□□□□ -0.08
FARP1-230ENST00000600380 FAM205AQ6ZU69 1335 aa14.57□□□□□ -0.08
FARP1-230ENST00000600380 ARAP2Q8WZ64 1704 aa14.57□□□□□ -0.08
FARP1-230ENST00000600380 EPS15P42566 896 aa14.56□□□□□ -0.08
FARP1-230ENST00000600380 SCNN1DP51172 638 aa14.56□□□□□ -0.08
FARP1-230ENST00000600380 CHAF1AQ13111 956 aaPredicted RBP14.56□□□□□ -0.08
FARP1-230ENST00000600380 RASGRF1Q13972 1273 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms