RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TAF7LQ5H9L4 462 aa23.45■■□□□ 1.34
CCDC9-205ENST00000600117 JDP2Q8WYK2 163 aa23.45■■□□□ 1.34
CCDC9-205ENST00000600117 PSMD1Q99460 953 aa23.45■■□□□ 1.34
CCDC9-205ENST00000600117 PUS3Q9BZE2 481 aaKnown RBP23.45■■□□□ 1.34
CCDC9-205ENST00000600117 COPRSQ9NQ92 184 aa23.45■■□□□ 1.34
CCDC9-205ENST00000600117 PA2G4Q9UQ80 394 aaKnown RBP23.45■■□□□ 1.34
CCDC9-205ENST00000600117 PDE4DIPQ5VU43 2346 aa23.45■■□□□ 1.34
CCDC9-205ENST00000600117 LDHAL6AQ6ZMR3 332 aa23.44■■□□□ 1.34
CCDC9-205ENST00000600117 GPR101Q96P66 508 aaPredicted RBP23.44■■□□□ 1.34
CCDC9-205ENST00000600117 LTBP1Q14766 1721 aa23.44■■□□□ 1.34
CCDC9-205ENST00000600117 A0A1B0GUL6 1792 aa23.43■■□□□ 1.34
CCDC9-205ENST00000600117 LMOD1P29536 600 aaPredicted RBP23.43■■□□□ 1.34
CCDC9-205ENST00000600117 CC2D2BQ6DHV5 1058 aa23.43■■□□□ 1.34
CCDC9-205ENST00000600117 MPHOSPH8Q99549 860 aa23.43■■□□□ 1.34
CCDC9-205ENST00000600117 MINPP1Q9UNW1 487 aa23.43■■□□□ 1.34
CCDC9-205ENST00000600117 EIF6P56537 245 aaKnown RBP23.42■■□□□ 1.34
CCDC9-205ENST00000600117 LRRC24Q50LG9 513 aa23.42■■□□□ 1.34
CCDC9-205ENST00000600117 CYP4F22Q6NT55 531 aa23.42■■□□□ 1.34
CCDC9-205ENST00000600117 PAXIP1Q6ZW49 1069 aaPredicted RBP23.42■■□□□ 1.34
CCDC9-205ENST00000600117 RIPOR2Q9Y4F9 1068 aa23.42■■□□□ 1.34
CCDC9-205ENST00000600117 GJA3Q9Y6H8 435 aa23.42■■□□□ 1.34
CCDC9-205ENST00000600117 EYA2O00167 538 aa23.41■■□□□ 1.34
CCDC9-205ENST00000600117 CNNM1Q9NRU3 951 aa23.41■■□□□ 1.34
CCDC9-205ENST00000600117 FBXO3Q9UK99 471 aa23.41■■□□□ 1.34
CCDC9-205ENST00000600117 DUOX1Q9NRD9 1551 aa23.4■■□□□ 1.34
CCDC9-205ENST00000600117 GPSM2P81274 684 aa23.4■■□□□ 1.34
CCDC9-205ENST00000600117 ATG9AQ7Z3C6 839 aa23.4■■□□□ 1.34
CCDC9-205ENST00000600117 COL4A5P29400 1685 aa23.4■■□□□ 1.34
CCDC9-205ENST00000600117 CIAO1O76071 339 aa23.39■■□□□ 1.33
CCDC9-205ENST00000600117 MAP2K2P36507 400 aa23.39■■□□□ 1.33
CCDC9-205ENST00000600117 SCNN1DP51172 638 aa23.39■■□□□ 1.33
CCDC9-205ENST00000600117 FMR1Q06787 632 aaKnown RBP eCLIP23.39■■□□□ 1.33
CCDC9-205ENST00000600117 CHRNDQ07001 517 aa23.39■■□□□ 1.33
CCDC9-205ENST00000600117 GRM1Q13255 1194 aa23.39■■□□□ 1.33
CCDC9-205ENST00000600117 CST9Q5W186 159 aa23.39■■□□□ 1.33
CCDC9-205ENST00000600117 SIL1Q9H173 461 aa23.39■■□□□ 1.33
CCDC9-205ENST00000600117 NOP58Q9Y2X3 529 aaKnown RBP23.39■■□□□ 1.33
CCDC9-205ENST00000600117 HMMRO75330 724 aa23.38■■□□□ 1.33
CCDC9-205ENST00000600117 EPS15P42566 896 aa23.38■■□□□ 1.33
CCDC9-205ENST00000600117 GRIPAP1Q4V328 841 aa23.38■■□□□ 1.33
CCDC9-205ENST00000600117 USP50Q70EL3 339 aaPredicted RBP23.38■■□□□ 1.33
CCDC9-205ENST00000600117 PODXL2Q9NZ53 605 aa23.38■■□□□ 1.33
CCDC9-205ENST00000600117 TLL2Q9Y6L7 1015 aa23.38■■□□□ 1.33
CCDC9-205ENST00000600117 CASP8AP2Q9UKL3 1982 aa23.38■■□□□ 1.33
CCDC9-205ENST00000600117 MPNDQ8N594 471 aa23.37■■□□□ 1.33
CCDC9-205ENST00000600117 TMX4Q9H1E5 349 aaPredicted RBP23.37■■□□□ 1.33
CCDC9-205ENST00000600117 XDHP47989 1333 aa23.36■■□□□ 1.33
CCDC9-205ENST00000600117 CA12O43570 354 aa23.36■■□□□ 1.33
CCDC9-205ENST00000600117 VGLL2Q8N8G2 317 aa23.36■■□□□ 1.33
CCDC9-205ENST00000600117 HELBQ8NG08 1087 aaPredicted RBP23.36■■□□□ 1.33
CCDC9-205ENST00000600117 RTFDC1Q9BY42 306 aaPredicted RBP23.36■■□□□ 1.33
CCDC9-205ENST00000600117 ANKRD2Q9GZV1 360 aa23.36■■□□□ 1.33
CCDC9-205ENST00000600117 NSFL1CQ9UNZ2 370 aaKnown RBP23.36■■□□□ 1.33
CCDC9-205ENST00000600117 MROH5Q6ZUA9 1318 aa23.35■■□□□ 1.33
CCDC9-205ENST00000600117 TRAF5O00463 557 aa23.35■■□□□ 1.33
CCDC9-205ENST00000600117 SURF6O75683 361 aaKnown RBP23.35■■□□□ 1.33
CCDC9-205ENST00000600117 IL15P40933 162 aaPredicted RBP23.35■■□□□ 1.33
CCDC9-205ENST00000600117 DPP8Q6V1X1 898 aaPredicted RBP23.35■■□□□ 1.33
CCDC9-205ENST00000600117 LARGE2Q8N3Y3 721 aa23.35■■□□□ 1.33
CCDC9-205ENST00000600117 TSKSQ9UJT2 592 aa23.35■■□□□ 1.33
CCDC9-205ENST00000600117 WTIPA6NIX2 430 aaPredicted RBP23.34■■□□□ 1.33
CCDC9-205ENST00000600117 TAF5LO75529 589 aa23.34■■□□□ 1.33
CCDC9-205ENST00000600117 NEFLP07196 543 aa23.34■■□□□ 1.33
CCDC9-205ENST00000600117 METTL24Q5JXM2 366 aa23.34■■□□□ 1.33
CCDC9-205ENST00000600117 ANKIB1Q9P2G1 1089 aa23.34■■□□□ 1.33
CCDC9-205ENST00000600117 POLLQ9UGP5 575 aa23.34■■□□□ 1.33
CCDC9-205ENST00000600117 AOC2O75106 756 aa23.33■■□□□ 1.33
CCDC9-205ENST00000600117 G3BP1Q13283 466 aaKnown RBP eCLIP23.33■■□□□ 1.33
CCDC9-205ENST00000600117 HDAC1Q13547 482 aaPredicted RBP23.33■■□□□ 1.33
CCDC9-205ENST00000600117 TBC1D16Q8TBP0 767 aa23.33■■□□□ 1.33
CCDC9-205ENST00000600117 MCOLN1Q9GZU1 580 aa23.33■■□□□ 1.33
CCDC9-205ENST00000600117 EXOC6BQ9Y2D4 811 aa23.33■■□□□ 1.33
CCDC9-205ENST00000600117 SNAP23O00161 211 aa23.32■■□□□ 1.32
CCDC9-205ENST00000600117 SASH1O94885 1247 aa23.32■■□□□ 1.32
CCDC9-205ENST00000600117 ATP2B4P23634 1241 aa23.32■■□□□ 1.32
CCDC9-205ENST00000600117 GGA1Q9UJY5 639 aa23.32■■□□□ 1.32
CCDC9-205ENST00000600117 LEMD3Q9Y2U8 911 aa23.32■■□□□ 1.32
CCDC9-205ENST00000600117 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.32■■□□□ 1.32
CCDC9-205ENST00000600117 UFL1O94874 794 aa23.31■■□□□ 1.32
CCDC9-205ENST00000600117 PDE8BO95263 885 aa23.31■■□□□ 1.32
CCDC9-205ENST00000600117 SAPCD2Q86UD0 394 aa23.31■■□□□ 1.32
CCDC9-205ENST00000600117 HHIPL1Q96JK4 782 aa23.31■■□□□ 1.32
CCDC9-205ENST00000600117 DCTPP1Q9H773 170 aa23.31■■□□□ 1.32
CCDC9-205ENST00000600117 ADARB2Q9NS39 739 aaKnown RBP23.31■■□□□ 1.32
CCDC9-205ENST00000600117 CEP126Q9P2H0 1117 aa23.31■■□□□ 1.32
CCDC9-205ENST00000600117 IRS2Q9Y4H2 1338 aa23.31■■□□□ 1.32
CCDC9-205ENST00000600117 TFCP2Q12800 502 aa23.3■■□□□ 1.32
CCDC9-205ENST00000600117 SUPT20HQ8NEM7 779 aa23.3■■□□□ 1.32
CCDC9-205ENST00000600117 ZNF804BA4D1E1 1349 aa23.3■■□□□ 1.32
CCDC9-205ENST00000600117 C6orf229H3BNL8 230 aa23.29■■□□□ 1.32
CCDC9-205ENST00000600117 FGFR2P21802 821 aa23.29■■□□□ 1.32
CCDC9-205ENST00000600117 OS9Q13438 667 aaPredicted RBP23.29■■□□□ 1.32
CCDC9-205ENST00000600117 NIM1KQ8IY84 436 aa23.29■■□□□ 1.32
CCDC9-205ENST00000600117 GPRC5DQ9NZD1 345 aa23.29■■□□□ 1.32
CCDC9-205ENST00000600117 CELF2O95319 508 aaKnown RBP23.28■■□□□ 1.32
CCDC9-205ENST00000600117 IGHDP01880 384 aa23.28■■□□□ 1.32
CCDC9-205ENST00000600117 UBE4AQ14139 1066 aa23.28■■□□□ 1.32
CCDC9-205ENST00000600117 HSP90AB4PQ58FF6 505 aa23.28■■□□□ 1.32
CCDC9-205ENST00000600117 RAB11FIP3O75154 756 aa23.27■■□□□ 1.32
CCDC9-205ENST00000600117 KLRK1P26718 216 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms