RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 WDR33Q9C0J8 1336 aaKnown RBP22.66■■□□□ 1.22
CHMP2A-203ENST00000597209 CELF2O95319 508 aaKnown RBP22.66■■□□□ 1.22
CHMP2A-203ENST00000597209 CT47B1P0C2W7 299 aaPredicted RBP22.66■■□□□ 1.22
CHMP2A-203ENST00000597209 RBM26Q5T8P6 1007 aaKnown RBP22.66■■□□□ 1.22
CHMP2A-203ENST00000597209 STRIP1Q5VSL9 837 aa22.66■■□□□ 1.22
CHMP2A-203ENST00000597209 C15orf52Q6ZUT6 534 aaKnown RBP22.66■■□□□ 1.22
CHMP2A-203ENST00000597209 USP48Q86UV5 1035 aa22.66■■□□□ 1.22
CHMP2A-203ENST00000597209 USP17L8P0C7I0 530 aa22.65■■□□□ 1.22
CHMP2A-203ENST00000597209 MMP14P50281 582 aa22.65■■□□□ 1.22
CHMP2A-203ENST00000597209 DCPSQ96C86 337 aaKnown RBP22.65■■□□□ 1.22
CHMP2A-203ENST00000597209 HHIPL1Q96JK4 782 aa22.65■■□□□ 1.22
CHMP2A-203ENST00000597209 ZNF646O15015 1829 aaPredicted RBP22.64■■□□□ 1.22
CHMP2A-203ENST00000597209 MYO3BQ8WXR4 1341 aa22.64■■□□□ 1.22
CHMP2A-203ENST00000597209 IRS2Q9Y4H2 1338 aa22.64■■□□□ 1.22
CHMP2A-203ENST00000597209 ECE1P42892 770 aa22.64■■□□□ 1.21
CHMP2A-203ENST00000597209 KCNJ4P48050 445 aa22.64■■□□□ 1.21
CHMP2A-203ENST00000597209 DACT2Q5SW24 774 aa22.64■■□□□ 1.21
CHMP2A-203ENST00000597209 KRT26Q7Z3Y9 468 aa22.64■■□□□ 1.21
CHMP2A-203ENST00000597209 SAPCD2Q86UD0 394 aa22.64■■□□□ 1.21
CHMP2A-203ENST00000597209 KAZALD1Q96I82 304 aa22.64■■□□□ 1.21
CHMP2A-203ENST00000597209 SUCLG2Q96I99 432 aa22.64■■□□□ 1.21
CHMP2A-203ENST00000597209 NBPF7P0C2Y1 421 aaPredicted RBP22.63■■□□□ 1.21
CHMP2A-203ENST00000597209 KLRK1P26718 216 aa22.63■■□□□ 1.21
CHMP2A-203ENST00000597209 LDHAL6AQ6ZMR3 332 aa22.63■■□□□ 1.21
CHMP2A-203ENST00000597209 WBP1LQ9NX94 342 aa22.63■■□□□ 1.21
CHMP2A-203ENST00000597209 A0A1B0GUL6 1792 aa22.63■■□□□ 1.21
CHMP2A-203ENST00000597209 THSD7BQ9C0I4 1608 aa22.62■■□□□ 1.21
CHMP2A-203ENST00000597209 PCNTO95613 3336 aa22.62■■□□□ 1.21
CHMP2A-203ENST00000597209 TAF7LQ5H9L4 462 aa22.62■■□□□ 1.21
CHMP2A-203ENST00000597209 COL13A1Q5TAT6 717 aaPredicted RBP22.62■■□□□ 1.21
CHMP2A-203ENST00000597209 CAPNS2Q96L46 248 aa22.62■■□□□ 1.21
CHMP2A-203ENST00000597209 MYOZ2Q9NPC6 264 aa22.62■■□□□ 1.21
CHMP2A-203ENST00000597209 TAF5LO75529 589 aa22.61■■□□□ 1.21
CHMP2A-203ENST00000597209 BRPF1P55201 1214 aaPredicted RBP22.61■■□□□ 1.21
CHMP2A-203ENST00000597209 RABL6Q3YEC7 729 aaPredicted RBP22.61■■□□□ 1.21
CHMP2A-203ENST00000597209 ZNF594Q96JF6 807 aaPredicted RBP22.61■■□□□ 1.21
CHMP2A-203ENST00000597209 CD209Q9NNX6 404 aa22.61■■□□□ 1.21
CHMP2A-203ENST00000597209 GGA3Q9NZ52 723 aa22.61■■□□□ 1.21
CHMP2A-203ENST00000597209 POLR2AP24928 1970 aaKnown RBP22.61■■□□□ 1.21
CHMP2A-203ENST00000597209 MAP2K1Q02750 393 aaPredicted RBP22.6■■□□□ 1.21
CHMP2A-203ENST00000597209 SCARF1Q14162 830 aa22.6■■□□□ 1.21
CHMP2A-203ENST00000597209 TTLL5Q6EMB2 1281 aa22.6■■□□□ 1.21
CHMP2A-203ENST00000597209 SULF1Q8IWU6 871 aa22.6■■□□□ 1.21
CHMP2A-203ENST00000597209 HELBQ8NG08 1087 aaPredicted RBP22.6■■□□□ 1.21
CHMP2A-203ENST00000597209 ZNF408Q9H9D4 720 aa22.6■■□□□ 1.21
CHMP2A-203ENST00000597209 CNNM1Q9NRU3 951 aa22.6■■□□□ 1.21
CHMP2A-203ENST00000597209 SMC4Q9NTJ3 1288 aa22.6■■□□□ 1.21
CHMP2A-203ENST00000597209 PITPNM2Q9BZ72 1349 aa22.59■■□□□ 1.21
CHMP2A-203ENST00000597209 CYP4F22Q6NT55 531 aa22.59■■□□□ 1.21
CHMP2A-203ENST00000597209 OGFOD1Q8N543 542 aa22.59■■□□□ 1.21
CHMP2A-203ENST00000597209 AIDAQ96BJ3 306 aa22.59■■□□□ 1.21
CHMP2A-203ENST00000597209 SNAP23O00161 211 aa22.58■■□□□ 1.21
CHMP2A-203ENST00000597209 FOXN1O15353 648 aa22.58■■□□□ 1.21
CHMP2A-203ENST00000597209 MAP2K2P36507 400 aa22.58■■□□□ 1.21
CHMP2A-203ENST00000597209 PAXIP1Q6ZW49 1069 aaPredicted RBP22.58■■□□□ 1.21
CHMP2A-203ENST00000597209 USP44Q9H0E7 712 aa22.58■■□□□ 1.21
CHMP2A-203ENST00000597209 BICC1Q9H694 974 aaKnown RBP22.58■■□□□ 1.21
CHMP2A-203ENST00000597209 ASTN2O75129 1339 aaPredicted RBP22.57■■□□□ 1.2
CHMP2A-203ENST00000597209 ADM5C9JUS6 153 aa22.57■■□□□ 1.2
CHMP2A-203ENST00000597209 IL1R1P14778 569 aa22.57■■□□□ 1.2
CHMP2A-203ENST00000597209 ANGEL2Q5VTE6 544 aaKnown RBP22.57■■□□□ 1.2
CHMP2A-203ENST00000597209 DLK2Q6UY11 383 aa22.57■■□□□ 1.2
CHMP2A-203ENST00000597209 ZNF804AQ7Z570 1209 aa22.57■■□□□ 1.2
CHMP2A-203ENST00000597209 ANKRD44Q8N8A2 993 aa22.57■■□□□ 1.2
CHMP2A-203ENST00000597209 FBXW7Q969H0 707 aa22.57■■□□□ 1.2
CHMP2A-203ENST00000597209 MXD3Q9BW11 206 aa22.57■■□□□ 1.2
CHMP2A-203ENST00000597209 CTCFP49711 727 aaPredicted RBP22.56■■□□□ 1.2
CHMP2A-203ENST00000597209 GTF2IP78347 998 aa22.56■■□□□ 1.2
CHMP2A-203ENST00000597209 UBE4AQ14139 1066 aa22.56■■□□□ 1.2
CHMP2A-203ENST00000597209 GBA2Q9HCG7 927 aaPredicted RBP22.56■■□□□ 1.2
CHMP2A-203ENST00000597209 RIPOR2Q9Y4F9 1068 aa22.56■■□□□ 1.2
CHMP2A-203ENST00000597209 FKBP1AP62942 108 aaKnown RBP22.55■■□□□ 1.2
CHMP2A-203ENST00000597209 C2orf69Q8N8R5 385 aa22.55■■□□□ 1.2
CHMP2A-203ENST00000597209 PRDM10Q9NQV6 1147 aa22.55■■□□□ 1.2
CHMP2A-203ENST00000597209 HDAC9Q9UKV0 1011 aa22.55■■□□□ 1.2
CHMP2A-203ENST00000597209 MROH5Q6ZUA9 1318 aa22.55■■□□□ 1.2
CHMP2A-203ENST00000597209 PLIN1O60240 522 aa22.54■■□□□ 1.2
CHMP2A-203ENST00000597209 PUS3Q9BZE2 481 aaKnown RBP22.54■■□□□ 1.2
CHMP2A-203ENST00000597209 WNT10BO00744 389 aa22.53■■□□□ 1.2
CHMP2A-203ENST00000597209 HUNKP57058 714 aa22.53■■□□□ 1.2
CHMP2A-203ENST00000597209 NBPF9Q3BBW0 867 aa22.53■■□□□ 1.2
CHMP2A-203ENST00000597209 CDCA5Q96FF9 252 aa22.53■■□□□ 1.2
CHMP2A-203ENST00000597209 API5Q9BZZ5 524 aaKnown RBP22.53■■□□□ 1.2
CHMP2A-203ENST00000597209 NOB1Q9ULX3 412 aaKnown RBP22.53■■□□□ 1.2
CHMP2A-203ENST00000597209 RARSP54136 660 aaKnown RBP22.52■■□□□ 1.2
CHMP2A-203ENST00000597209 GRM1Q13255 1194 aa22.52■■□□□ 1.2
CHMP2A-203ENST00000597209 ZBED3Q96IU2 234 aaPredicted RBP22.52■■□□□ 1.2
CHMP2A-203ENST00000597209 AOC2O75106 756 aa22.51■■□□□ 1.19
CHMP2A-203ENST00000597209 KIAA0825Q8IV33 1275 aa22.51■■□□□ 1.19
CHMP2A-203ENST00000597209 TNS4Q8IZW8 715 aa22.51■■□□□ 1.19
CHMP2A-203ENST00000597209 SASH1O94885 1247 aa22.5■■□□□ 1.19
CHMP2A-203ENST00000597209 FKBP1BP68106 108 aa22.5■■□□□ 1.19
CHMP2A-203ENST00000597209 RGMBQ6NW40 437 aa22.5■■□□□ 1.19
CHMP2A-203ENST00000597209 CERS5Q8N5B7 392 aa22.5■■□□□ 1.19
CHMP2A-203ENST00000597209 ARHGAP45Q92619 1136 aa22.5■■□□□ 1.19
CHMP2A-203ENST00000597209 FAM205AQ6ZU69 1335 aa22.5■■□□□ 1.19
CHMP2A-203ENST00000597209 HSPA8P11142 646 aaKnown RBP22.49■■□□□ 1.19
CHMP2A-203ENST00000597209 HIBADHP31937 336 aaKnown RBP22.49■■□□□ 1.19
CHMP2A-203ENST00000597209 NOGQ13253 232 aa22.49■■□□□ 1.19
CHMP2A-203ENST00000597209 DIEXFQ68CQ4 756 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms