RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 CHST3Q7LGC8 479 aa20.3■□□□□ 0.84
ARHGEF1-213ENST00000595897 GOLIM4O00461 696 aa20.29■□□□□ 0.84
ARHGEF1-213ENST00000595897 SMC2O95347 1197 aa20.29■□□□□ 0.84
ARHGEF1-213ENST00000595897 SLFNL1Q499Z3 407 aa20.29■□□□□ 0.84
ARHGEF1-213ENST00000595897 KRT222Q8N1A0 295 aa20.29■□□□□ 0.84
ARHGEF1-213ENST00000595897 KBTBD3Q8NAB2 608 aa20.29■□□□□ 0.84
ARHGEF1-213ENST00000595897 MRPS27Q92552 414 aaKnown RBP20.29■□□□□ 0.84
ARHGEF1-213ENST00000595897 ERO1AQ96HE7 468 aa20.29■□□□□ 0.84
ARHGEF1-213ENST00000595897 MORC2Q9Y6X9 1032 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF1-213ENST00000595897 A0A1B0GVL5 298 aa20.29■□□□□ 0.84
ARHGEF1-213ENST00000595897 ARHGAP23Q9P227 1491 aa20.29■□□□□ 0.84
ARHGEF1-213ENST00000595897 RFX5P48382 616 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF1-213ENST00000595897 FMNL2Q96PY5 1086 aa20.28■□□□□ 0.84
ARHGEF1-213ENST00000595897 PCDHA7Q9UN72 937 aa20.28■□□□□ 0.84
ARHGEF1-213ENST00000595897 ATP5J2-PTCD1G3V325 749 aa20.28■□□□□ 0.84
ARHGEF1-213ENST00000595897 PTCD1O75127 700 aaKnown RBP20.28■□□□□ 0.84
ARHGEF1-213ENST00000595897 SLU7O95391 586 aaKnown RBP20.28■□□□□ 0.84
ARHGEF1-213ENST00000595897 NFAT5O94916 1531 aa20.27■□□□□ 0.84
ARHGEF1-213ENST00000595897 KIF2AO00139 706 aaPredicted RBP20.27■□□□□ 0.84
ARHGEF1-213ENST00000595897 RFX7Q2KHR2 1363 aa20.27■□□□□ 0.84
ARHGEF1-213ENST00000595897 A0A087WZG4 1122 aa20.27■□□□□ 0.83
ARHGEF1-213ENST00000595897 ARHGEF25Q86VW2 580 aa20.27■□□□□ 0.83
ARHGEF1-213ENST00000595897 STK38Q15208 465 aa20.26■□□□□ 0.83
ARHGEF1-213ENST00000595897 FBXO38Q6PIJ6 1188 aa20.26■□□□□ 0.83
ARHGEF1-213ENST00000595897 LMO7Q8WWI1 1683 aa20.26■□□□□ 0.83
ARHGEF1-213ENST00000595897 PAG1Q9NWQ8 432 aa20.26■□□□□ 0.83
ARHGEF1-213ENST00000595897 SH3TC1Q8TE82 1336 aa20.26■□□□□ 0.83
ARHGEF1-213ENST00000595897 OVOS2A0A0G2JMS6 1433 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 E7EWF7 191 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 NRDCO43847 1150 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 PDIA3P30101 505 aaKnown RBP20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 TMC6Q7Z403 805 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 FMR1NBQ8N0W7 255 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 NFATC2IPQ8NCF5 419 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 POLR3DP05423 398 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 SFPQP23246 707 aaKnown RBP eCLIP20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 NDUFA8P51970 172 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 EXOSC10Q01780 885 aaKnown RBP20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 DPCR1Q3MIW9 517 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 ADALQ6DHV7 355 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 ILDR1Q86SU0 546 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 BIN1O00499 593 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 DSCC1Q9BVC3 393 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 IFNKQ9P0W0 207 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 IMPACTQ9P2X3 320 aa20.25■□□□□ 0.83
ARHGEF1-213ENST00000595897 A0A0G2JLW4 131 aa20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 TPM4P67936 248 aa20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 OTUD7BQ6GQQ9 843 aa20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 NBPF11Q86T75 865 aa20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 SYTL4Q96C24 671 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 XPO4Q9C0E2 1151 aaKnown RBP20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 HELLSQ9NRZ9 838 aa20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 KIAA1468Q9P260 1216 aa20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 CARMIL3Q8ND23 1372 aa20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 LMBR1LQ6UX01 489 aa20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 CHMP4CQ96CF2 233 aa20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 ZNF496Q96IT1 587 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 OSBPL5Q9H0X9 879 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF1-213ENST00000595897 MRC1P22897 1456 aa20.23■□□□□ 0.83
ARHGEF1-213ENST00000595897 ZNF274Q96GC6 653 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF1-213ENST00000595897 SLC52A2Q9HAB3 445 aa20.23■□□□□ 0.83
ARHGEF1-213ENST00000595897 HSPD1P10809 573 aaKnown RBP20.23■□□□□ 0.83
ARHGEF1-213ENST00000595897 CCDC150Q8NCX0 1101 aa20.23■□□□□ 0.83
ARHGEF1-213ENST00000595897 RAPGEF4Q8WZA2 1011 aa20.23■□□□□ 0.83
ARHGEF1-213ENST00000595897 RTEL1Q9NZ71 1219 aa20.23■□□□□ 0.83
ARHGEF1-213ENST00000595897 AXIN2Q9Y2T1 843 aa20.23■□□□□ 0.83
ARHGEF1-213ENST00000595897 USP54Q70EL1 1684 aa20.23■□□□□ 0.83
ARHGEF1-213ENST00000595897 RGPD2P0DJD1 1756 aa20.23■□□□□ 0.83
ARHGEF1-213ENST00000595897 SLFN14P0C7P3 912 aa20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 TIMM10P62072 90 aa20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 RABL6Q3YEC7 729 aaPredicted RBP20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 SYT10Q6XYQ8 523 aa20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 TTC5Q8N0Z6 440 aa20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 SALL1Q9NSC2 1324 aa20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 E4F1Q66K89 784 aaPredicted RBP20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 AGXT2Q9BYV1 514 aa20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 CLIC4Q9Y696 253 aa20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 SLC3A2P08195 630 aaKnown RBP20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 HOMER1Q86YM7 354 aa20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 C8orf76Q96K31 380 aa20.22■□□□□ 0.83
ARHGEF1-213ENST00000595897 TERF2Q15554 542 aa20.21■□□□□ 0.83
ARHGEF1-213ENST00000595897 LINC00301Q8NCQ3 95 aa20.21■□□□□ 0.83
ARHGEF1-213ENST00000595897 KCNG4Q8TDN1 519 aa20.21■□□□□ 0.83
ARHGEF1-213ENST00000595897 PPP1R13BQ96KQ4 1090 aa20.21■□□□□ 0.83
ARHGEF1-213ENST00000595897 A0A1W2PQ27 194 aa20.21■□□□□ 0.83
ARHGEF1-213ENST00000595897 A0A1W2PQ64 194 aa20.21■□□□□ 0.83
ARHGEF1-213ENST00000595897 A0A1W2PQD8 194 aa20.21■□□□□ 0.83
ARHGEF1-213ENST00000595897 FDPSP14324 419 aaKnown RBP20.2■□□□□ 0.82
ARHGEF1-213ENST00000595897 ERCC6LQ2NKX8 1250 aa20.2■□□□□ 0.82
ARHGEF1-213ENST00000595897 TTLL5Q6EMB2 1281 aa20.2■□□□□ 0.82
ARHGEF1-213ENST00000595897 SYNE3Q6ZMZ3 975 aa20.2■□□□□ 0.82
ARHGEF1-213ENST00000595897 KCND1Q9NSA2 647 aa20.2■□□□□ 0.82
ARHGEF1-213ENST00000595897 SPTLC2O15270 562 aa20.2■□□□□ 0.82
ARHGEF1-213ENST00000595897 SNRPA1P09661 255 aaKnown RBP20.2■□□□□ 0.82
ARHGEF1-213ENST00000595897 ZMYM1Q5SVZ6 1142 aa20.2■□□□□ 0.82
ARHGEF1-213ENST00000595897 ARMCX5Q6P1M9 558 aa20.2■□□□□ 0.82
ARHGEF1-213ENST00000595897 TAF3Q5VWG9 929 aa20.19■□□□□ 0.82
ARHGEF1-213ENST00000595897 GPHNQ9NQX3 736 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF1-213ENST00000595897 A0A0U1RQG5 324 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF1-213ENST00000595897 NLRP2Q9NX02 1062 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms