RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 LPIN2Q92539 896 aa27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 ZC3H12CQ9C0D7 883 aaKnown RBP27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 GPR108Q9NPR9 543 aa27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 COL4A5P29400 1685 aa27.83■■■□□ 2.05
SNRNP70-204ENST00000595231 AKAP2Q9Y2D5 859 aa27.83■■■□□ 2.05
SNRNP70-204ENST00000595231 PPIP5K2O43314 1243 aa27.82■■■□□ 2.04
SNRNP70-204ENST00000595231 SMC5Q8IY18 1101 aa27.82■■■□□ 2.04
SNRNP70-204ENST00000595231 GCC1Q96CN9 775 aa27.82■■■□□ 2.04
SNRNP70-204ENST00000595231 A0A1B0GUL7 405 aa27.81■■■□□ 2.04
SNRNP70-204ENST00000595231 TNNI3KQ59H18 835 aa27.81■■■□□ 2.04
SNRNP70-204ENST00000595231 IL1RAPL2Q9NP60 686 aa27.81■■■□□ 2.04
SNRNP70-204ENST00000595231 FPGT-TNNI3KV9GXZ4 949 aa27.81■■■□□ 2.04
SNRNP70-204ENST00000595231 LRRCC1Q9C099 1032 aa27.81■■■□□ 2.04
SNRNP70-204ENST00000595231 ZNF609O15014 1411 aa27.8■■■□□ 2.04
SNRNP70-204ENST00000595231 IFIT1P09914 478 aaKnown RBP27.8■■■□□ 2.04
SNRNP70-204ENST00000595231 SLC5A1P13866 664 aa27.8■■■□□ 2.04
SNRNP70-204ENST00000595231 LARGE2Q8N3Y3 721 aa27.8■■■□□ 2.04
SNRNP70-204ENST00000595231 EAF2Q96CJ1 260 aaPredicted RBP27.8■■■□□ 2.04
SNRNP70-204ENST00000595231 FAM84BQ96KN1 310 aaPredicted RBP27.8■■■□□ 2.04
SNRNP70-204ENST00000595231 DICER1Q9UPY3 1922 aaKnown RBP27.79■■■□□ 2.04
SNRNP70-204ENST00000595231 SMARCA5O60264 1052 aaPredicted RBP27.78■■■□□ 2.04
SNRNP70-204ENST00000595231 C9orf131Q5VYM1 1079 aa27.78■■■□□ 2.04
SNRNP70-204ENST00000595231 ADORA1P30542 326 aa27.78■■■□□ 2.04
SNRNP70-204ENST00000595231 GYG1P46976 350 aa27.78■■■□□ 2.04
SNRNP70-204ENST00000595231 DOK7Q18PE1 504 aa27.78■■■□□ 2.04
SNRNP70-204ENST00000595231 NEUROD6Q96NK8 337 aa27.78■■■□□ 2.04
SNRNP70-204ENST00000595231 FBXO33Q7Z6M2 555 aa27.77■■■□□ 2.04
SNRNP70-204ENST00000595231 XAGE2Q96GT9 111 aa27.77■■■□□ 2.04
SNRNP70-204ENST00000595231 RNF181Q9P0P0 153 aa27.77■■■□□ 2.04
SNRNP70-204ENST00000595231 ARAP2Q8WZ64 1704 aa27.77■■■□□ 2.04
SNRNP70-204ENST00000595231 CLASRPQ8N2M8 674 aaKnown RBP27.76■■■□□ 2.03
SNRNP70-204ENST00000595231 DBNDD1Q9H9R9 158 aa27.76■■■□□ 2.03
SNRNP70-204ENST00000595231 BCAMP50895 628 aa27.75■■■□□ 2.03
SNRNP70-204ENST00000595231 JDP2Q8WYK2 163 aa27.75■■■□□ 2.03
SNRNP70-204ENST00000595231 COA1Q9GZY4 146 aa27.75■■■□□ 2.03
SNRNP70-204ENST00000595231 CCDC8Q9H0W5 538 aaPredicted RBP27.75■■■□□ 2.03
SNRNP70-204ENST00000595231 TLR7Q9NYK1 1049 aaKnown RBP27.75■■■□□ 2.03
SNRNP70-204ENST00000595231 HIBADHP31937 336 aaKnown RBP27.74■■■□□ 2.03
SNRNP70-204ENST00000595231 CAVIN4Q5BKX8 364 aa27.74■■■□□ 2.03
SNRNP70-204ENST00000595231 ANKRD45Q5TZF3 282 aa27.74■■■□□ 2.03
SNRNP70-204ENST00000595231 AACSQ86V21 672 aa27.74■■■□□ 2.03
SNRNP70-204ENST00000595231 NIM1KQ8IY84 436 aa27.74■■■□□ 2.03
SNRNP70-204ENST00000595231 DBNDD2Q9BQY9 259 aa27.74■■■□□ 2.03
SNRNP70-204ENST00000595231 CD209Q9NNX6 404 aa27.74■■■□□ 2.03
SNRNP70-204ENST00000595231 DBNLQ9UJU6 430 aaKnown RBP27.74■■■□□ 2.03
SNRNP70-204ENST00000595231 CHD4Q14839 1912 aa27.73■■■□□ 2.03
SNRNP70-204ENST00000595231 KDM2BQ8NHM5 1336 aa27.73■■■□□ 2.03
SNRNP70-204ENST00000595231 YDJCA8MPS7 323 aa27.73■■■□□ 2.03
SNRNP70-204ENST00000595231 ECE2O60344 883 aa27.73■■■□□ 2.03
SNRNP70-204ENST00000595231 ZNF804AQ7Z570 1209 aa27.73■■■□□ 2.03
SNRNP70-204ENST00000595231 FZD9O00144 591 aa27.72■■■□□ 2.03
SNRNP70-204ENST00000595231 B4GALNT3Q6L9W6 998 aa27.72■■■□□ 2.03
SNRNP70-204ENST00000595231 PODNQ7Z5L7 613 aa27.72■■■□□ 2.03
SNRNP70-204ENST00000595231 CCDC136Q96JN2 1154 aa27.72■■■□□ 2.03
SNRNP70-204ENST00000595231 BCL11AQ9H165 835 aa27.72■■■□□ 2.03
SNRNP70-204ENST00000595231 PPP4R2Q9NY27 417 aa27.72■■■□□ 2.03
SNRNP70-204ENST00000595231 ZNRF3Q9ULT6 936 aa27.72■■■□□ 2.03
SNRNP70-204ENST00000595231 IL1R1P14778 569 aa27.72■■■□□ 2.03
SNRNP70-204ENST00000595231 CCDC102BQ68D86 513 aa27.72■■■□□ 2.03
SNRNP70-204ENST00000595231 KCNQ5Q9NR82 932 aa27.72■■■□□ 2.03
SNRNP70-204ENST00000595231 G3V3G9 751 aa27.71■■■□□ 2.03
SNRNP70-204ENST00000595231 PHKA1P46020 1223 aa27.71■■■□□ 2.03
SNRNP70-204ENST00000595231 DCAF8Q5TAQ9 597 aa27.71■■■□□ 2.03
SNRNP70-204ENST00000595231 TDRD7Q8NHU6 1098 aaKnown RBP27.71■■■□□ 2.03
SNRNP70-204ENST00000595231 SCN9AQ15858 1988 aa27.71■■■□□ 2.03
SNRNP70-204ENST00000595231 NUCB1Q02818 461 aa27.7■■■□□ 2.02
SNRNP70-204ENST00000595231 VPS37DQ86XT2 251 aa27.7■■■□□ 2.02
SNRNP70-204ENST00000595231 TIAM2Q8IVF5 1701 aa27.7■■■□□ 2.02
SNRNP70-204ENST00000595231 C16orf71Q8IYS4 520 aaPredicted RBP27.69■■■□□ 2.02
SNRNP70-204ENST00000595231 IFIT2P09913 472 aaKnown RBP27.68■■■□□ 2.02
SNRNP70-204ENST00000595231 GORABQ5T7V8 394 aa27.68■■■□□ 2.02
SNRNP70-204ENST00000595231 IQSEC3Q9UPP2 1182 aaPredicted RBP27.68■■■□□ 2.02
SNRNP70-204ENST00000595231 CHD1LQ86WJ1 897 aa27.67■■■□□ 2.02
SNRNP70-204ENST00000595231 CXCL9Q07325 125 aa27.66■■■□□ 2.02
SNRNP70-204ENST00000595231 CENPQQ7L2Z9 268 aaPredicted RBP27.66■■■□□ 2.02
SNRNP70-204ENST00000595231 LNPKQ9C0E8 428 aa27.66■■■□□ 2.02
SNRNP70-204ENST00000595231 ZC3H4Q9UPT8 1303 aaKnown RBP27.66■■■□□ 2.02
SNRNP70-204ENST00000595231 ZBTB22O15209 634 aa27.65■■■□□ 2.02
SNRNP70-204ENST00000595231 ZNF541Q9H0D2 1346 aa27.65■■■□□ 2.02
SNRNP70-204ENST00000595231 RAD17O75943 681 aa27.65■■■□□ 2.02
SNRNP70-204ENST00000595231 CCDC158Q5M9N0 1113 aa27.65■■■□□ 2.02
SNRNP70-204ENST00000595231 OTUD7AQ8TE49 926 aaPredicted RBP27.65■■■□□ 2.02
SNRNP70-204ENST00000595231 ARID4AP29374 1257 aaPredicted RBP27.64■■■□□ 2.02
SNRNP70-204ENST00000595231 ZNF512BQ96KM6 892 aaPredicted RBP27.64■■■□□ 2.02
SNRNP70-204ENST00000595231 GNL3LQ9NVN8 582 aaKnown RBP27.64■■■□□ 2.02
SNRNP70-204ENST00000595231 ZBTB47Q9UFB7 747 aaPredicted RBP27.64■■■□□ 2.02
SNRNP70-204ENST00000595231 ZNF646O15015 1829 aaPredicted RBP27.63■■■□□ 2.01
SNRNP70-204ENST00000595231 PSME4Q14997 1843 aa27.63■■■□□ 2.01
SNRNP70-204ENST00000595231 EIF6P56537 245 aaKnown RBP27.63■■■□□ 2.01
SNRNP70-204ENST00000595231 SALL3Q9BXA9 1300 aa27.63■■■□□ 2.01
SNRNP70-204ENST00000595231 GTF2IP78347 998 aa27.62■■■□□ 2.01
SNRNP70-204ENST00000595231 RASGRF1Q13972 1273 aa27.62■■■□□ 2.01
SNRNP70-204ENST00000595231 SCARF1Q14162 830 aa27.62■■■□□ 2.01
SNRNP70-204ENST00000595231 COL1A1P02452 1464 aaPredicted RBP27.62■■■□□ 2.01
SNRNP70-204ENST00000595231 USP17L3A6NCW0 530 aa27.62■■■□□ 2.01
SNRNP70-204ENST00000595231 USP17L4A6NCW7 530 aa27.62■■■□□ 2.01
SNRNP70-204ENST00000595231 PSMD14O00487 310 aa27.62■■■□□ 2.01
SNRNP70-204ENST00000595231 TTC39AQ5SRH9 613 aa27.62■■■□□ 2.01
SNRNP70-204ENST00000595231 STRIP1Q5VSL9 837 aa27.62■■■□□ 2.01
SNRNP70-204ENST00000595231 TTLL5Q6EMB2 1281 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms