RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 RGS19P49795 217 aa22.44■■□□□ 1.18
SHKBP1-203ENST00000594298 KIF23Q02241 960 aaPredicted RBP22.44■■□□□ 1.18
SHKBP1-203ENST00000594298 IL16Q14005 1332 aa22.44■■□□□ 1.18
SHKBP1-203ENST00000594298 WTIPA6NIX2 430 aaPredicted RBP22.43■■□□□ 1.18
SHKBP1-203ENST00000594298 SLC4A2P04920 1241 aa22.43■■□□□ 1.18
SHKBP1-203ENST00000594298 FKBP1BP68106 108 aa22.43■■□□□ 1.18
SHKBP1-203ENST00000594298 G2E3Q7L622 706 aa22.43■■□□□ 1.18
SHKBP1-203ENST00000594298 WDR63Q8IWG1 891 aa22.43■■□□□ 1.18
SHKBP1-203ENST00000594298 PLA2G12BQ9BX93 195 aa22.43■■□□□ 1.18
SHKBP1-203ENST00000594298 PSME4Q14997 1843 aa22.43■■□□□ 1.18
SHKBP1-203ENST00000594298 CCT4P50991 539 aaKnown RBP22.42■■□□□ 1.18
SHKBP1-203ENST00000594298 FAM161AQ3B820 660 aa22.42■■□□□ 1.18
SHKBP1-203ENST00000594298 SALL2Q9Y467 1007 aaPredicted RBP22.42■■□□□ 1.18
SHKBP1-203ENST00000594298 DACT2Q5SW24 774 aa22.41■■□□□ 1.18
SHKBP1-203ENST00000594298 UBE3BQ7Z3V4 1068 aa22.41■■□□□ 1.18
SHKBP1-203ENST00000594298 REM2Q8IYK8 340 aaPredicted RBP22.41■■□□□ 1.18
SHKBP1-203ENST00000594298 COA1Q9GZY4 146 aa22.41■■□□□ 1.18
SHKBP1-203ENST00000594298 LEMD3Q9Y2U8 911 aa22.41■■□□□ 1.18
SHKBP1-203ENST00000594298 MYO3BQ8WXR4 1341 aa22.4■■□□□ 1.18
SHKBP1-203ENST00000594298 IGHMBP2P38935 993 aaKnown RBP22.4■■□□□ 1.18
SHKBP1-203ENST00000594298 DGKZQ13574 1117 aa22.4■■□□□ 1.18
SHKBP1-203ENST00000594298 GCKRQ14397 625 aa22.4■■□□□ 1.18
SHKBP1-203ENST00000594298 STRIP1Q5VSL9 837 aa22.4■■□□□ 1.18
SHKBP1-203ENST00000594298 POLR2AP24928 1970 aaKnown RBP22.39■■□□□ 1.18
SHKBP1-203ENST00000594298 MMP14P50281 582 aa22.39■■□□□ 1.17
SHKBP1-203ENST00000594298 CASP7P55210 303 aa22.39■■□□□ 1.17
SHKBP1-203ENST00000594298 FLIIQ13045 1269 aa22.39■■□□□ 1.17
SHKBP1-203ENST00000594298 CSRNP1Q96S65 589 aa22.39■■□□□ 1.17
SHKBP1-203ENST00000594298 RNF186Q9NXI6 227 aa22.39■■□□□ 1.17
SHKBP1-203ENST00000594298 CSF1RP07333 972 aa22.38■■□□□ 1.17
SHKBP1-203ENST00000594298 RASAL3Q86YV0 1011 aa22.38■■□□□ 1.17
SHKBP1-203ENST00000594298 OGFOD1Q8N543 542 aa22.38■■□□□ 1.17
SHKBP1-203ENST00000594298 ANKRD2Q9GZV1 360 aa22.38■■□□□ 1.17
SHKBP1-203ENST00000594298 MYH16Q9H6N6 1097 aa22.38■■□□□ 1.17
SHKBP1-203ENST00000594298 PAPPA2Q9BXP8 1791 aa22.38■■□□□ 1.17
SHKBP1-203ENST00000594298 ITGA6P23229 1130 aa22.37■■□□□ 1.17
SHKBP1-203ENST00000594298 MLLT1Q03111 559 aaPredicted RBP22.37■■□□□ 1.17
SHKBP1-203ENST00000594298 TXNRD3Q86VQ6 643 aa22.37■■□□□ 1.17
SHKBP1-203ENST00000594298 LINS1Q8NG48 757 aa22.37■■□□□ 1.17
SHKBP1-203ENST00000594298 ZNF804BA4D1E1 1349 aa22.36■■□□□ 1.17
SHKBP1-203ENST00000594298 TRPA1O75762 1119 aa22.36■■□□□ 1.17
SHKBP1-203ENST00000594298 NBPF9Q3BBW0 867 aa22.36■■□□□ 1.17
SHKBP1-203ENST00000594298 DNAAF4Q8WXU2 420 aa22.36■■□□□ 1.17
SHKBP1-203ENST00000594298 MXD3Q9BW11 206 aa22.36■■□□□ 1.17
SHKBP1-203ENST00000594298 MYH3P11055 1940 aa22.35■■□□□ 1.17
SHKBP1-203ENST00000594298 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
SHKBP1-203ENST00000594298 WNT10BO00744 389 aa22.35■■□□□ 1.17
SHKBP1-203ENST00000594298 FKBP5Q13451 457 aaPredicted RBP22.35■■□□□ 1.17
SHKBP1-203ENST00000594298 MIER1Q8N108 512 aa22.35■■□□□ 1.17
SHKBP1-203ENST00000594298 MPHOSPH8Q99549 860 aa22.35■■□□□ 1.17
SHKBP1-203ENST00000594298 CASP8AP2Q9UKL3 1982 aa22.35■■□□□ 1.17
SHKBP1-203ENST00000594298 VAMP4O75379 141 aa22.33■■□□□ 1.17
SHKBP1-203ENST00000594298 TTLL5Q6EMB2 1281 aa22.33■■□□□ 1.17
SHKBP1-203ENST00000594298 FBXW7Q969H0 707 aa22.33■■□□□ 1.17
SHKBP1-203ENST00000594298 SCAF8Q9UPN6 1271 aaKnown RBP22.33■■□□□ 1.17
SHKBP1-203ENST00000594298 ZNF646O15015 1829 aaPredicted RBP22.33■■□□□ 1.16
SHKBP1-203ENST00000594298 KLRK1P26718 216 aa22.32■■□□□ 1.16
SHKBP1-203ENST00000594298 MOB2Q70IA6 237 aa22.32■■□□□ 1.16
SHKBP1-203ENST00000594298 CHRNDQ07001 517 aa22.31■■□□□ 1.16
SHKBP1-203ENST00000594298 HDAC9Q9UKV0 1011 aa22.31■■□□□ 1.16
SHKBP1-203ENST00000594298 SPEF2Q9C093 1822 aa22.31■■□□□ 1.16
SHKBP1-203ENST00000594298 ANKRD18BA2A2Z9 1011 aa22.3■■□□□ 1.16
SHKBP1-203ENST00000594298 UBE2Q2LH0YL09 131 aa22.3■■□□□ 1.16
SHKBP1-203ENST00000594298 NF2P35240 595 aa22.3■■□□□ 1.16
SHKBP1-203ENST00000594298 PRAMEF18Q5VWM3 479 aa22.3■■□□□ 1.16
SHKBP1-203ENST00000594298 C15orf52Q6ZUT6 534 aaKnown RBP22.3■■□□□ 1.16
SHKBP1-203ENST00000594298 SASH1O94885 1247 aa22.29■■□□□ 1.16
SHKBP1-203ENST00000594298 KCNJ4P48050 445 aa22.29■■□□□ 1.16
SHKBP1-203ENST00000594298 GTF2IP78347 998 aa22.29■■□□□ 1.16
SHKBP1-203ENST00000594298 APOBEC3FQ8IUX4 373 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-203ENST00000594298 ZBED3Q96IU2 234 aaPredicted RBP22.29■■□□□ 1.16
SHKBP1-203ENST00000594298 CD209Q9NNX6 404 aa22.29■■□□□ 1.16
SHKBP1-203ENST00000594298 IRS2Q9Y4H2 1338 aa22.29■■□□□ 1.16
SHKBP1-203ENST00000594298 FOXO4P98177 505 aa22.28■■□□□ 1.16
SHKBP1-203ENST00000594298 KIAA0825Q8IV33 1275 aa22.28■■□□□ 1.16
SHKBP1-203ENST00000594298 EXOSC9Q06265 439 aaKnown RBP22.27■■□□□ 1.16
SHKBP1-203ENST00000594298 IFIT5Q13325 482 aaKnown RBP22.27■■□□□ 1.16
SHKBP1-203ENST00000594298 BEND3Q5T5X7 828 aa22.27■■□□□ 1.16
SHKBP1-203ENST00000594298 CTU1Q7Z7A3 348 aaKnown RBP22.27■■□□□ 1.16
SHKBP1-203ENST00000594298 TM4SF4P48230 202 aa22.26■■□□□ 1.15
SHKBP1-203ENST00000594298 TTLL12Q14166 644 aaPredicted RBP22.26■■□□□ 1.15
SHKBP1-203ENST00000594298 MTMR14Q8NCE2 650 aa22.25■■□□□ 1.15
SHKBP1-203ENST00000594298 COL1A1P02452 1464 aaPredicted RBP22.25■■□□□ 1.15
SHKBP1-203ENST00000594298 AKAP11Q9UKA4 1901 aa22.25■■□□□ 1.15
SHKBP1-203ENST00000594298 ZNF521Q96K83 1311 aa22.25■■□□□ 1.15
SHKBP1-203ENST00000594298 F6X3S4 739 aa22.24■■□□□ 1.15
SHKBP1-203ENST00000594298 IL1R1P14778 569 aa22.24■■□□□ 1.15
SHKBP1-203ENST00000594298 NOM1Q5C9Z4 860 aaKnown RBP22.24■■□□□ 1.15
SHKBP1-203ENST00000594298 ARMC9Q7Z3E5 817 aa22.24■■□□□ 1.15
SHKBP1-203ENST00000594298 SNAP23O00161 211 aa22.23■■□□□ 1.15
SHKBP1-203ENST00000594298 TAF5LO75529 589 aa22.23■■□□□ 1.15
SHKBP1-203ENST00000594298 FKBP1AP62942 108 aaKnown RBP22.23■■□□□ 1.15
SHKBP1-203ENST00000594298 LDLRAD1Q5T700 205 aa22.23■■□□□ 1.15
SHKBP1-203ENST00000594298 CERS5Q8N5B7 392 aa22.23■■□□□ 1.15
SHKBP1-203ENST00000594298 CACNA1FO60840 1977 aa22.23■■□□□ 1.15
SHKBP1-203ENST00000594298 E9PSI1 815 aa22.22■■□□□ 1.15
SHKBP1-203ENST00000594298 PTPN12Q05209 780 aaKnown RBP22.22■■□□□ 1.15
SHKBP1-203ENST00000594298 DLGAP5Q15398 846 aa22.22■■□□□ 1.15
SHKBP1-203ENST00000594298 ZNF804AQ7Z570 1209 aa22.22■■□□□ 1.15
SHKBP1-203ENST00000594298 HELBQ8NG08 1087 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms