RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 SSH1Q8WYL5 1049 aa16.57■□□□□ 0.24
PRKCSH-218ENST00000593053 DCPSQ96C86 337 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-218ENST00000593053 CAPNS2Q96L46 248 aa16.57■□□□□ 0.24
PRKCSH-218ENST00000593053 GMLQ99445 158 aa16.57■□□□□ 0.24
PRKCSH-218ENST00000593053 ZNF609O15014 1411 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 ASTN2O75129 1339 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 FOXN1O15353 648 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 USP17L8P0C7I0 530 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 CCDC57Q2TAC2 916 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 TAF7LQ5H9L4 462 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 CYP4F22Q6NT55 531 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 SAPCD2Q86UD0 394 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 FBXW7Q969H0 707 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 GGA3Q9NZ52 723 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 CACNA1FO60840 1977 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 SCN9AQ15858 1988 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 MYH3P11055 1940 aa16.56■□□□□ 0.24
PRKCSH-218ENST00000593053 ADM5C9JUS6 153 aa16.55■□□□□ 0.24
PRKCSH-218ENST00000593053 SNAP23O00161 211 aa16.55■□□□□ 0.24
PRKCSH-218ENST00000593053 TAF5LO75529 589 aa16.55■□□□□ 0.24
PRKCSH-218ENST00000593053 ECE1P42892 770 aa16.55■□□□□ 0.24
PRKCSH-218ENST00000593053 DACT2Q5SW24 774 aa16.55■□□□□ 0.24
PRKCSH-218ENST00000593053 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
PRKCSH-218ENST00000593053 SUCLG2Q96I99 432 aa16.55■□□□□ 0.24
PRKCSH-218ENST00000593053 ZNF594Q96JF6 807 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-218ENST00000593053 MXD3Q9BW11 206 aa16.55■□□□□ 0.24
PRKCSH-218ENST00000593053 WBP1LQ9NX94 342 aa16.55■□□□□ 0.24
PRKCSH-218ENST00000593053 PTPRCP08575 1304 aa16.54■□□□□ 0.24
PRKCSH-218ENST00000593053 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
PRKCSH-218ENST00000593053 SCARF1Q14162 830 aa16.54■□□□□ 0.24
PRKCSH-218ENST00000593053 STRIP1Q5VSL9 837 aa16.54■□□□□ 0.24
PRKCSH-218ENST00000593053 MYOZ2Q9NPC6 264 aa16.54■□□□□ 0.24
PRKCSH-218ENST00000593053 SPEF2Q9C093 1822 aa16.54■□□□□ 0.24
PRKCSH-218ENST00000593053 LDHAL6AQ6ZMR3 332 aa16.53■□□□□ 0.24
PRKCSH-218ENST00000593053 SULF1Q8IWU6 871 aa16.53■□□□□ 0.24
PRKCSH-218ENST00000593053 KAZALD1Q96I82 304 aa16.53■□□□□ 0.24
PRKCSH-218ENST00000593053 UTYO14607 1347 aa16.52■□□□□ 0.24
PRKCSH-218ENST00000593053 PLIN1O60240 522 aa16.52■□□□□ 0.24
PRKCSH-218ENST00000593053 MAP2K1Q02750 393 aaPredicted RBP16.52■□□□□ 0.24
PRKCSH-218ENST00000593053 ANGEL2Q5VTE6 544 aaKnown RBP16.52■□□□□ 0.24
PRKCSH-218ENST00000593053 TTLL5Q6EMB2 1281 aa16.52■□□□□ 0.24
PRKCSH-218ENST00000593053 TRMT2AQ8IZ69 625 aaKnown RBP16.52■□□□□ 0.24
PRKCSH-218ENST00000593053 TNS4Q8IZW8 715 aa16.52■□□□□ 0.24
PRKCSH-218ENST00000593053 CNNM1Q9NRU3 951 aa16.52■□□□□ 0.24
PRKCSH-218ENST00000593053 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.24
PRKCSH-218ENST00000593053 MYO3BQ8WXR4 1341 aa16.51■□□□□ 0.23
PRKCSH-218ENST00000593053 IRS2Q9Y4H2 1338 aa16.51■□□□□ 0.23
PRKCSH-218ENST00000593053 AOC2O75106 756 aa16.51■□□□□ 0.23
PRKCSH-218ENST00000593053 CTCFP49711 727 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-218ENST00000593053 GTF2IP78347 998 aa16.51■□□□□ 0.23
PRKCSH-218ENST00000593053 ALDH1L2Q3SY69 923 aa16.51■□□□□ 0.23
PRKCSH-218ENST00000593053 OGFOD1Q8N543 542 aa16.51■□□□□ 0.23
PRKCSH-218ENST00000593053 HHIPL1Q96JK4 782 aa16.51■□□□□ 0.23
PRKCSH-218ENST00000593053 BICC1Q9H694 974 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-218ENST00000593053 CD209Q9NNX6 404 aa16.51■□□□□ 0.23
PRKCSH-218ENST00000593053 HUNKP57058 714 aa16.5■□□□□ 0.23
PRKCSH-218ENST00000593053 C15orf52Q6ZUT6 534 aaKnown RBP16.5■□□□□ 0.23
PRKCSH-218ENST00000593053 GBA2Q9HCG7 927 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-218ENST00000593053 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
PRKCSH-218ENST00000593053 NBPF9Q3BBW0 867 aa16.49■□□□□ 0.23
PRKCSH-218ENST00000593053 ZNF804AQ7Z570 1209 aa16.49■□□□□ 0.23
PRKCSH-218ENST00000593053 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
PRKCSH-218ENST00000593053 ANKRD44Q8N8A2 993 aa16.49■□□□□ 0.23
PRKCSH-218ENST00000593053 C2orf69Q8N8R5 385 aa16.49■□□□□ 0.23
PRKCSH-218ENST00000593053 CDCA5Q96FF9 252 aa16.49■□□□□ 0.23
PRKCSH-218ENST00000593053 PUS3Q9BZE2 481 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-218ENST00000593053 MAP2K2P36507 400 aa16.48■□□□□ 0.23
PRKCSH-218ENST00000593053 LBX1P52954 281 aa16.48■□□□□ 0.23
PRKCSH-218ENST00000593053 RABL6Q3YEC7 729 aaPredicted RBP16.48■□□□□ 0.23
PRKCSH-218ENST00000593053 USP44Q9H0E7 712 aa16.48■□□□□ 0.23
PRKCSH-218ENST00000593053 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
PRKCSH-218ENST00000593053 SCAF8Q9UPN6 1271 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-218ENST00000593053 PITPNM2Q9BZ72 1349 aa16.47■□□□□ 0.23
PRKCSH-218ENST00000593053 SASH1O94885 1247 aa16.47■□□□□ 0.23
PRKCSH-218ENST00000593053 CT47B1P0C2W7 299 aaPredicted RBP16.47■□□□□ 0.23
PRKCSH-218ENST00000593053 HSPA8P11142 646 aaKnown RBP16.47■□□□□ 0.23
PRKCSH-218ENST00000593053 BEGAINQ9BUH8 593 aa16.47■□□□□ 0.23
PRKCSH-218ENST00000593053 HDAC9Q9UKV0 1011 aa16.47■□□□□ 0.23
PRKCSH-218ENST00000593053 PSME4Q14997 1843 aa16.47■□□□□ 0.23
PRKCSH-218ENST00000593053 WNT10BO00744 389 aa16.46■□□□□ 0.23
PRKCSH-218ENST00000593053 IL1R1P14778 569 aa16.46■□□□□ 0.23
PRKCSH-218ENST00000593053 CERS5Q8N5B7 392 aa16.46■□□□□ 0.23
PRKCSH-218ENST00000593053 NOB1Q9ULX3 412 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-218ENST00000593053 RIPOR2Q9Y4F9 1068 aa16.46■□□□□ 0.23
PRKCSH-218ENST00000593053 THSD7BQ9C0I4 1608 aa16.45■□□□□ 0.22
PRKCSH-218ENST00000593053 MMP14P50281 582 aa16.45■□□□□ 0.22
PRKCSH-218ENST00000593053 UBE4AQ14139 1066 aa16.45■□□□□ 0.22
PRKCSH-218ENST00000593053 RGMBQ6NW40 437 aa16.45■□□□□ 0.22
PRKCSH-218ENST00000593053 JAG2Q9Y219 1238 aa16.45■□□□□ 0.22
PRKCSH-218ENST00000593053 MROH5Q6ZUA9 1318 aa16.45■□□□□ 0.22
PRKCSH-218ENST00000593053 ZNF157P51786 506 aaPredicted RBP16.44■□□□□ 0.22
PRKCSH-218ENST00000593053 NOGQ13253 232 aa16.44■□□□□ 0.22
PRKCSH-218ENST00000593053 LRRC24Q50LG9 513 aa16.44■□□□□ 0.22
PRKCSH-218ENST00000593053 PRAMEF18Q5VWM3 479 aa16.44■□□□□ 0.22
PRKCSH-218ENST00000593053 KLHDC4Q8TBB5 520 aa16.44■□□□□ 0.22
PRKCSH-218ENST00000593053 ZIC5Q96T25 663 aa16.44■□□□□ 0.22
PRKCSH-218ENST00000593053 F8W031 263 aaPredicted RBP16.43■□□□□ 0.22
PRKCSH-218ENST00000593053 CAPN15O75808 1086 aa16.43■□□□□ 0.22
PRKCSH-218ENST00000593053 GYG1P46976 350 aa16.43■□□□□ 0.22
PRKCSH-218ENST00000593053 BRPF1P55201 1214 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms