RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 ZBTB12Q9Y330 459 aaPredicted RBP19.12■□□□□ 0.65
TRIM47-206ENST00000592942 SRGAP3O43295 1099 aa19.11■□□□□ 0.65
TRIM47-206ENST00000592942 PDE8BO95263 885 aa19.11■□□□□ 0.65
TRIM47-206ENST00000592942 POTEIP0CG38 1075 aa19.11■□□□□ 0.65
TRIM47-206ENST00000592942 POTEJP0CG39 1038 aa19.11■□□□□ 0.65
TRIM47-206ENST00000592942 GMPSP49915 693 aaPredicted RBP19.11■□□□□ 0.65
TRIM47-206ENST00000592942 ATP8B2P98198 1209 aa19.11■□□□□ 0.65
TRIM47-206ENST00000592942 PDE3AQ14432 1141 aa19.11■□□□□ 0.65
TRIM47-206ENST00000592942 MVPQ14764 893 aaKnown RBP19.11■□□□□ 0.65
TRIM47-206ENST00000592942 C1orf115Q9H7X2 142 aa19.11■□□□□ 0.65
TRIM47-206ENST00000592942 HACL1Q9UJ83 578 aa19.11■□□□□ 0.65
TRIM47-206ENST00000592942 FBXO3Q9UK99 471 aa19.11■□□□□ 0.65
TRIM47-206ENST00000592942 SCN4AP35499 1836 aa19.1■□□□□ 0.65
TRIM47-206ENST00000592942 IQCA1LA6NCM1 817 aa19.1■□□□□ 0.65
TRIM47-206ENST00000592942 CIAO1O76071 339 aa19.1■□□□□ 0.65
TRIM47-206ENST00000592942 FGFR2P21802 821 aa19.1■□□□□ 0.65
TRIM47-206ENST00000592942 KCNJ4P48050 445 aa19.1■□□□□ 0.65
TRIM47-206ENST00000592942 POLA2Q14181 598 aa19.1■□□□□ 0.65
TRIM47-206ENST00000592942 METTL24Q5JXM2 366 aa19.1■□□□□ 0.65
TRIM47-206ENST00000592942 RBM46Q8TBY0 533 aaKnown RBP19.1■□□□□ 0.65
TRIM47-206ENST00000592942 SIL1Q9H173 461 aa19.1■□□□□ 0.65
TRIM47-206ENST00000592942 CD209Q9NNX6 404 aa19.1■□□□□ 0.65
TRIM47-206ENST00000592942 GPRC5DQ9NZD1 345 aa19.1■□□□□ 0.65
TRIM47-206ENST00000592942 SHTN1A0MZ66 631 aa19.09■□□□□ 0.65
TRIM47-206ENST00000592942 G3V3G9 751 aa19.09■□□□□ 0.65
TRIM47-206ENST00000592942 EPHX2P34913 555 aa19.09■□□□□ 0.65
TRIM47-206ENST00000592942 DCAF8Q5TAQ9 597 aa19.09■□□□□ 0.65
TRIM47-206ENST00000592942 DPF2Q92785 391 aa19.09■□□□□ 0.65
TRIM47-206ENST00000592942 FAM84BQ96KN1 310 aaPredicted RBP19.09■□□□□ 0.65
TRIM47-206ENST00000592942 GMLQ99445 158 aa19.09■□□□□ 0.65
TRIM47-206ENST00000592942 ZBTB40Q9NUA8 1239 aa19.09■□□□□ 0.65
TRIM47-206ENST00000592942 SSH3Q8TE77 659 aa19.08■□□□□ 0.64
TRIM47-206ENST00000592942 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.08■□□□□ 0.64
TRIM47-206ENST00000592942 USP17L3A6NCW0 530 aa19.07■□□□□ 0.64
TRIM47-206ENST00000592942 USP17L4A6NCW7 530 aa19.07■□□□□ 0.64
TRIM47-206ENST00000592942 IL1R1P14778 569 aa19.07■□□□□ 0.64
TRIM47-206ENST00000592942 IL15P40933 162 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-206ENST00000592942 USP17L1Q7RTZ2 530 aa19.07■□□□□ 0.64
TRIM47-206ENST00000592942 FBXO33Q7Z6M2 555 aa19.07■□□□□ 0.64
TRIM47-206ENST00000592942 C16orf71Q8IYS4 520 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-206ENST00000592942 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-206ENST00000592942 CNOT7Q9UIV1 285 aaKnown RBP19.07■□□□□ 0.64
TRIM47-206ENST00000592942 GYG1P46976 350 aa19.06■□□□□ 0.64
TRIM47-206ENST00000592942 APLP1P51693 650 aa19.06■□□□□ 0.64
TRIM47-206ENST00000592942 DACT2Q5SW24 774 aa19.06■□□□□ 0.64
TRIM47-206ENST00000592942 RSBN1LQ6PCB5 846 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-206ENST00000592942 MXD3Q9BW11 206 aa19.06■□□□□ 0.64
TRIM47-206ENST00000592942 DDX19BQ9UMR2 479 aa19.06■□□□□ 0.64
TRIM47-206ENST00000592942 RPS12P25398 132 aaKnown RBP19.05■□□□□ 0.64
TRIM47-206ENST00000592942 HIRAP54198 1017 aaPredicted RBP19.05■□□□□ 0.64
TRIM47-206ENST00000592942 STRIP1Q5VSL9 837 aa19.05■□□□□ 0.64
TRIM47-206ENST00000592942 TTLL5Q6EMB2 1281 aa19.05■□□□□ 0.64
TRIM47-206ENST00000592942 CEP85Q6P2H3 762 aa19.05■□□□□ 0.64
TRIM47-206ENST00000592942 TDRD7Q8NHU6 1098 aaKnown RBP19.05■□□□□ 0.64
TRIM47-206ENST00000592942 ZNF646O15015 1829 aaPredicted RBP19.04■□□□□ 0.64
TRIM47-206ENST00000592942 PSME4Q14997 1843 aa19.04■□□□□ 0.64
TRIM47-206ENST00000592942 LMOD1P29536 600 aaPredicted RBP19.04■□□□□ 0.64
TRIM47-206ENST00000592942 HIBADHP31937 336 aaKnown RBP19.04■□□□□ 0.64
TRIM47-206ENST00000592942 FSTL1Q12841 308 aa19.04■□□□□ 0.64
TRIM47-206ENST00000592942 PUM3Q15397 648 aaKnown RBP19.04■□□□□ 0.64
TRIM47-206ENST00000592942 PNMA8AQ86V59 439 aaPredicted RBP19.04■□□□□ 0.64
TRIM47-206ENST00000592942 DNAJC5GQ8N7S2 189 aa19.04■□□□□ 0.64
TRIM47-206ENST00000592942 AGBL3Q8NEM8 1001 aa19.04■□□□□ 0.64
TRIM47-206ENST00000592942 ADARB2Q9NS39 739 aaKnown RBP19.04■□□□□ 0.64
TRIM47-206ENST00000592942 CEP126Q9P2H0 1117 aa19.04■□□□□ 0.64
TRIM47-206ENST00000592942 ZNF609O15014 1411 aa19.03■□□□□ 0.64
TRIM47-206ENST00000592942 SASH1O94885 1247 aa19.03■□□□□ 0.64
TRIM47-206ENST00000592942 EGFRP00533 1210 aa19.03■□□□□ 0.64
TRIM47-206ENST00000592942 BCAMP50895 628 aa19.03■□□□□ 0.64
TRIM47-206ENST00000592942 RRP1P56182 461 aaKnown RBP19.03■□□□□ 0.64
TRIM47-206ENST00000592942 GTF2IP78347 998 aa19.03■□□□□ 0.64
TRIM47-206ENST00000592942 EAPPQ56P03 285 aaPredicted RBP19.03■□□□□ 0.64
TRIM47-206ENST00000592942 USP50Q70EL3 339 aaPredicted RBP19.03■□□□□ 0.64
TRIM47-206ENST00000592942 ZNF804AQ7Z570 1209 aa19.03■□□□□ 0.64
TRIM47-206ENST00000592942 LDHDQ86WU2 507 aa19.03■□□□□ 0.64
TRIM47-206ENST00000592942 SIRT2Q8IXJ6 389 aa19.03■□□□□ 0.64
TRIM47-206ENST00000592942 MICALL2Q8IY33 904 aa19.03■□□□□ 0.64
TRIM47-206ENST00000592942 SMC1BQ8NDV3 1235 aa19.03■□□□□ 0.64
TRIM47-206ENST00000592942 LPIN2Q92539 896 aa19.03■□□□□ 0.64
TRIM47-206ENST00000592942 ADAMTSL1Q8N6G6 1762 aa19.02■□□□□ 0.64
TRIM47-206ENST00000592942 TFCP2Q12800 502 aa19.02■□□□□ 0.64
TRIM47-206ENST00000592942 CHADLQ6NUI6 762 aa19.02■□□□□ 0.64
TRIM47-206ENST00000592942 SAMD7Q7Z3H4 446 aa19.02■□□□□ 0.64
TRIM47-206ENST00000592942 CERS5Q8N5B7 392 aa19.02■□□□□ 0.64
TRIM47-206ENST00000592942 TRPM4Q8TD43 1214 aa19.02■□□□□ 0.64
TRIM47-206ENST00000592942 PGAP2Q9UHJ9 254 aa19.02■□□□□ 0.64
TRIM47-206ENST00000592942 NOP58Q9Y2X3 529 aaKnown RBP19.02■□□□□ 0.64
TRIM47-206ENST00000592942 H7C1D1 291 aa19.01■□□□□ 0.63
TRIM47-206ENST00000592942 IFIT1P09914 478 aaKnown RBP19.01■□□□□ 0.63
TRIM47-206ENST00000592942 ZNF280AP59817 542 aaPredicted RBP19.01■□□□□ 0.63
TRIM47-206ENST00000592942 TIMM10P62072 90 aa19.01■□□□□ 0.63
TRIM47-206ENST00000592942 FAM205AQ6ZU69 1335 aa19■□□□□ 0.63
TRIM47-206ENST00000592942 ITGBL1O95965 494 aaPredicted RBP19■□□□□ 0.63
TRIM47-206ENST00000592942 SLC5A1P13866 664 aa18.99■□□□□ 0.63
TRIM47-206ENST00000592942 G3BP1Q13283 466 aaKnown RBP eCLIP18.99■□□□□ 0.632e-8■■■■■ 28.9
TRIM47-206ENST00000592942 ATP2B3Q16720 1220 aa18.99■□□□□ 0.63
TRIM47-206ENST00000592942 RPAP2Q8IXW5 612 aaPredicted RBP18.99■□□□□ 0.63
TRIM47-206ENST00000592942 JAG2Q9Y219 1238 aa18.99■□□□□ 0.63
TRIM47-206ENST00000592942 SURF6O75683 361 aaKnown RBP18.98■□□□□ 0.63
TRIM47-206ENST00000592942 USP17L8P0C7I0 530 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms