RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 C15orf52Q6ZUT6 534 aaKnown RBP34.22■■■■□ 3.07
SMAD4-213ENST00000591914 USP17L1Q7RTZ2 530 aa34.22■■■■□ 3.07
SMAD4-213ENST00000591914 KLRG1Q96E93 195 aa34.22■■■■□ 3.07
SMAD4-213ENST00000591914 PGAP2Q9UHJ9 254 aa34.22■■■■□ 3.07
SMAD4-213ENST00000591914 ZNF646O15015 1829 aaPredicted RBP34.21■■■■□ 3.07
SMAD4-213ENST00000591914 SNAP23O00161 211 aa34.21■■■■□ 3.07
SMAD4-213ENST00000591914 BCAR3O75815 825 aa34.21■■■■□ 3.07
SMAD4-213ENST00000591914 AGBL3Q8NEM8 1001 aa34.21■■■■□ 3.07
SMAD4-213ENST00000591914 ZC3H15Q8WU90 426 aaKnown RBP34.21■■■■□ 3.07
SMAD4-213ENST00000591914 IPO8O15397 1037 aaKnown RBP34.19■■■■□ 3.06
SMAD4-213ENST00000591914 GMLQ99445 158 aa34.19■■■■□ 3.06
SMAD4-213ENST00000591914 PUS3Q9BZE2 481 aaKnown RBP34.19■■■■□ 3.06
SMAD4-213ENST00000591914 UBTFL1P0CB47 393 aaPredicted RBP34.18■■■■□ 3.06
SMAD4-213ENST00000591914 INTS3Q68E01 1043 aaKnown RBP34.18■■■■□ 3.06
SMAD4-213ENST00000591914 SAMD7Q7Z3H4 446 aa34.18■■■■□ 3.06
SMAD4-213ENST00000591914 RIPOR2Q9Y4F9 1068 aa34.18■■■■□ 3.06
SMAD4-213ENST00000591914 EGFRP00533 1210 aa34.17■■■■□ 3.06
SMAD4-213ENST00000591914 TMEM88BA6NKF7 163 aa34.16■■■■□ 3.06
SMAD4-213ENST00000591914 TRIM27P14373 513 aa34.16■■■■□ 3.06
SMAD4-213ENST00000591914 TBC1D10BQ4KMP7 808 aaPredicted RBP34.16■■■■□ 3.06
SMAD4-213ENST00000591914 DACT2Q5SW24 774 aa34.16■■■■□ 3.06
SMAD4-213ENST00000591914 STRIP1Q5VSL9 837 aa34.16■■■■□ 3.06
SMAD4-213ENST00000591914 PLIN1O60240 522 aa34.15■■■■□ 3.06
SMAD4-213ENST00000591914 ZNF280AP59817 542 aaPredicted RBP34.15■■■■□ 3.06
SMAD4-213ENST00000591914 ATF7IPQ6VMQ6 1270 aa34.15■■■■□ 3.06
SMAD4-213ENST00000591914 MROH5Q6ZUA9 1318 aa34.14■■■■□ 3.06
SMAD4-213ENST00000591914 FRAT1Q92837 279 aaPredicted RBP34.14■■■■□ 3.06
SMAD4-213ENST00000591914 CD209Q9NNX6 404 aa34.14■■■■□ 3.06
SMAD4-213ENST00000591914 TRAF5O00463 557 aa34.12■■■■□ 3.05
SMAD4-213ENST00000591914 UBE4AQ14139 1066 aa34.12■■■■□ 3.05
SMAD4-213ENST00000591914 LRRC24Q50LG9 513 aa34.12■■■■□ 3.05
SMAD4-213ENST00000591914 JMYQ8N9B5 988 aa34.12■■■■□ 3.05
SMAD4-213ENST00000591914 KLHDC4Q8TBB5 520 aa34.12■■■■□ 3.05
SMAD4-213ENST00000591914 MEIS3Q99687 375 aa34.12■■■■□ 3.05
SMAD4-213ENST00000591914 HDAC5Q9UQL6 1122 aa34.12■■■■□ 3.05
SMAD4-213ENST00000591914 MYO3BQ8WXR4 1341 aa34.11■■■■□ 3.05
SMAD4-213ENST00000591914 USP17L8P0C7I0 530 aa34.11■■■■□ 3.05
SMAD4-213ENST00000591914 RFX5P48382 616 aaPredicted RBP34.11■■■■□ 3.05
SMAD4-213ENST00000591914 FMR1Q06787 632 aaKnown RBP eCLIP34.11■■■■□ 3.057e-8■■■□□ 16.8
SMAD4-213ENST00000591914 KIF4BQ2VIQ3 1234 aa34.11■■■■□ 3.05
SMAD4-213ENST00000591914 ZNF804AQ7Z570 1209 aa34.11■■■■□ 3.05
SMAD4-213ENST00000591914 TNNQ9UQP3 1299 aa34.11■■■■□ 3.05
SMAD4-213ENST00000591914 RBM26Q5T8P6 1007 aaKnown RBP34.1■■■■□ 3.05
SMAD4-213ENST00000591914 TTLL5Q6EMB2 1281 aa34.1■■■■□ 3.05
SMAD4-213ENST00000591914 MXD3Q9BW11 206 aa34.1■■■■□ 3.05
SMAD4-213ENST00000591914 GLIS2Q9BZE0 524 aaPredicted RBP34.1■■■■□ 3.05
SMAD4-213ENST00000591914 TRPM7Q96QT4 1865 aa34.1■■■■□ 3.05
SMAD4-213ENST00000591914 IL1R1P14778 569 aa34.09■■■■□ 3.05
SMAD4-213ENST00000591914 FBXW7Q969H0 707 aa34.09■■■■□ 3.05
SMAD4-213ENST00000591914 LRRFIP2Q9Y608 721 aaKnown RBP34.09■■■■□ 3.05
SMAD4-213ENST00000591914 ZKSCAN2Q63HK3 967 aa34.08■■■■□ 3.05
SMAD4-213ENST00000591914 CDC37L1Q7L3B6 337 aa34.08■■■■□ 3.05
SMAD4-213ENST00000591914 VGLL2Q8N8G2 317 aa34.08■■■■□ 3.05
SMAD4-213ENST00000591914 PCNTO95613 3336 aa34.07■■■■□ 3.04
SMAD4-213ENST00000591914 GTF2IP78347 998 aa34.07■■■■□ 3.04
SMAD4-213ENST00000591914 PTPN12Q05209 780 aaKnown RBP34.07■■■■□ 3.04
SMAD4-213ENST00000591914 METTL24Q5JXM2 366 aa34.07■■■■□ 3.04
SMAD4-213ENST00000591914 GNAI3P08754 354 aa34.06■■■■□ 3.04
SMAD4-213ENST00000591914 CLUAP1Q96AJ1 413 aa34.06■■■■□ 3.04
SMAD4-213ENST00000591914 MYOZ2Q9NPC6 264 aa34.06■■■■□ 3.04
SMAD4-213ENST00000591914 CNTNAP1P78357 1384 aa34.06■■■■□ 3.04
SMAD4-213ENST00000591914 PDE8BO95263 885 aa34.05■■■■□ 3.04
SMAD4-213ENST00000591914 CST9Q5W186 159 aa34.05■■■■□ 3.04
SMAD4-213ENST00000591914 MKRN1Q9UHC7 482 aaKnown RBP34.05■■■■□ 3.04
SMAD4-213ENST00000591914 EYA2O00167 538 aa34.03■■■■□ 3.04
SMAD4-213ENST00000591914 MMP14P50281 582 aa34.03■■■■□ 3.04
SMAD4-213ENST00000591914 USP48Q86UV5 1035 aa34.02■■■■□ 3.04
SMAD4-213ENST00000591914 OGFOD1Q8N543 542 aa34.02■■■■□ 3.04
SMAD4-213ENST00000591914 DCPSQ96C86 337 aaKnown RBP34.02■■■■□ 3.04
SMAD4-213ENST00000591914 FAM84BQ96KN1 310 aaPredicted RBP34.02■■■■□ 3.04
SMAD4-213ENST00000591914 ASTN2O75129 1339 aaPredicted RBP34.02■■■■□ 3.04
SMAD4-213ENST00000591914 GYG1P46976 350 aa34.01■■■■□ 3.03
SMAD4-213ENST00000591914 KRT26Q7Z3Y9 468 aa34.01■■■■□ 3.03
SMAD4-213ENST00000591914 GGA3Q9NZ52 723 aa34.01■■■■□ 3.03
SMAD4-213ENST00000591914 FBXO3Q9UK99 471 aa34.01■■■■□ 3.03
SMAD4-213ENST00000591914 POLR2AP24928 1970 aaKnown RBP34.01■■■■□ 3.03
SMAD4-213ENST00000591914 RASSF10A6NK89 507 aa34■■■■□ 3.03
SMAD4-213ENST00000591914 HIBADHP31937 336 aaKnown RBP34■■■■□ 3.03
SMAD4-213ENST00000591914 SCARF1Q14162 830 aa34■■■■□ 3.03
SMAD4-213ENST00000591914 ATG9AQ7Z3C6 839 aa34■■■■□ 3.03
SMAD4-213ENST00000591914 SASH1O94885 1247 aa33.99■■■■□ 3.03
SMAD4-213ENST00000591914 CERS5Q8N5B7 392 aa33.99■■■■□ 3.03
SMAD4-213ENST00000591914 TMEM57Q8N5G2 664 aa33.99■■■■□ 3.03
SMAD4-213ENST00000591914 TDRD7Q8NHU6 1098 aaKnown RBP33.99■■■■□ 3.03
SMAD4-213ENST00000591914 ABT1Q9ULW3 272 aaKnown RBP33.99■■■■□ 3.03
SMAD4-213ENST00000591914 CIAO1O76071 339 aa33.98■■■■□ 3.03
SMAD4-213ENST00000591914 CELF2O95319 508 aaKnown RBP33.98■■■■□ 3.03
SMAD4-213ENST00000591914 FKBP1AP62942 108 aaKnown RBP33.98■■■■□ 3.03
SMAD4-213ENST00000591914 KIAA0825Q8IV33 1275 aa33.98■■■■□ 3.03
SMAD4-213ENST00000591914 FGFR2P21802 821 aa33.97■■■■□ 3.03
SMAD4-213ENST00000591914 MTX1Q13505 466 aa33.97■■■■□ 3.03
SMAD4-213ENST00000591914 PUM3Q15397 648 aaKnown RBP33.97■■■■□ 3.03
SMAD4-213ENST00000591914 FBXO33Q7Z6M2 555 aa33.97■■■■□ 3.03
SMAD4-213ENST00000591914 FAM205AQ6ZU69 1335 aa33.97■■■■□ 3.03
SMAD4-213ENST00000591914 ADM5C9JUS6 153 aa33.96■■■■□ 3.03
SMAD4-213ENST00000591914 DEFB115Q30KQ5 88 aa33.96■■■■□ 3.03
SMAD4-213ENST00000591914 ANGEL2Q5VTE6 544 aaKnown RBP33.96■■■■□ 3.03
SMAD4-213ENST00000591914 DLK2Q6UY11 383 aa33.96■■■■□ 3.03
SMAD4-213ENST00000591914 COPRSQ9NQ92 184 aa33.96■■■■□ 3.03
SMAD4-213ENST00000591914 SULF1Q8IWU6 871 aa33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms