RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 ZFYVE28Q9HCC9 887 aa15.16■□□□□ 0.02
CAPNS1-209ENST00000590049 MYOZ2Q9NPC6 264 aa15.16■□□□□ 0.02
CAPNS1-209ENST00000590049 LAMB1P07942 1786 aa15.16■□□□□ 0.02
CAPNS1-209ENST00000590049 TAF1P21675 1872 aa15.15■□□□□ 0.02
CAPNS1-209ENST00000590049 SYN1P17600 705 aa15.15■□□□□ 0.02
CAPNS1-209ENST00000590049 GRK4P32298 578 aa15.15■□□□□ 0.02
CAPNS1-209ENST00000590049 MYLIPQ8WY64 445 aa15.15■□□□□ 0.02
CAPNS1-209ENST00000590049 NLRP3Q96P20 1036 aa15.15■□□□□ 0.02
CAPNS1-209ENST00000590049 SSC5DA1L4H1 1573 aa15.15■□□□□ 0.02
CAPNS1-209ENST00000590049 DUOX1Q9NRD9 1551 aa15.15■□□□□ 0.02
CAPNS1-209ENST00000590049 TESPA1A2RU30 521 aaPredicted RBP15.14■□□□□ 0.01
CAPNS1-209ENST00000590049 FOSL2P15408 326 aa15.14■□□□□ 0.01
CAPNS1-209ENST00000590049 UBXN2AP68543 259 aa15.14■□□□□ 0.01
CAPNS1-209ENST00000590049 LACTBP83111 547 aaPredicted RBP15.14■□□□□ 0.01
CAPNS1-209ENST00000590049 WDR43Q15061 677 aaKnown RBP eCLIP15.14■□□□□ 0.01
CAPNS1-209ENST00000590049 TAF1CQ15572 869 aaPredicted RBP15.14■□□□□ 0.01
CAPNS1-209ENST00000590049 AGBL3Q8NEM8 1001 aa15.14■□□□□ 0.01
CAPNS1-209ENST00000590049 BIN2Q9UBW5 565 aaPredicted RBP15.14■□□□□ 0.01
CAPNS1-209ENST00000590049 NUDCQ9Y266 331 aa15.14■□□□□ 0.01
CAPNS1-209ENST00000590049 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
CAPNS1-209ENST00000590049 RIMBP2O15034 1052 aa15.13■□□□□ 0.01
CAPNS1-209ENST00000590049 ADAMTS19Q8TE59 1207 aa15.13■□□□□ 0.01
CAPNS1-209ENST00000590049 SEMA6BQ9H3T3 888 aa15.13■□□□□ 0.01
CAPNS1-209ENST00000590049 USP16Q9Y5T5 823 aa15.13■□□□□ 0.01
CAPNS1-209ENST00000590049 FAM205AQ6ZU69 1335 aa15.13■□□□□ 0.01
CAPNS1-209ENST00000590049 TFRCP02786 760 aaKnown RBP15.12■□□□□ 0.01
CAPNS1-209ENST00000590049 USP17L8P0C7I0 530 aa15.12■□□□□ 0.01
CAPNS1-209ENST00000590049 MRE11P49959 708 aa15.12■□□□□ 0.01
CAPNS1-209ENST00000590049 DOK7Q18PE1 504 aa15.12■□□□□ 0.01
CAPNS1-209ENST00000590049 FAM9BQ8IZU0 186 aa15.12■□□□□ 0.01
CAPNS1-209ENST00000590049 RAET1EQ8TD07 263 aa15.12■□□□□ 0.01
CAPNS1-209ENST00000590049 PAWRQ96IZ0 340 aaKnown RBP15.12■□□□□ 0.01
CAPNS1-209ENST00000590049 CLMNQ96JQ2 1002 aa15.12■□□□□ 0.01
CAPNS1-209ENST00000590049 TRIM47Q96LD4 638 aa15.12■□□□□ 0.01
CAPNS1-209ENST00000590049 UHRF1Q96T88 793 aaPredicted RBP15.12■□□□□ 0.01
CAPNS1-209ENST00000590049 RIPOR2Q9Y4F9 1068 aa15.12■□□□□ 0.01
CAPNS1-209ENST00000590049 ALPK3Q96L96 1907 aa15.11■□□□□ 0.01
CAPNS1-209ENST00000590049 DIAPH1O60610 1272 aaKnown RBP15.11■□□□□ 0.01
CAPNS1-209ENST00000590049 CCDC184Q52MB2 194 aa15.11■□□□□ 0.01
CAPNS1-209ENST00000590049 NECAB2Q7Z6G3 386 aa15.11■□□□□ 0.01
CAPNS1-209ENST00000590049 LRFN3Q9BTN0 628 aa15.11■□□□□ 0.01
CAPNS1-209ENST00000590049 CDH23Q9H251 3354 aa15.11■□□□□ 0.01
CAPNS1-209ENST00000590049 UNCXA6NJT0 531 aa15.1■□□□□ 0.01
CAPNS1-209ENST00000590049 NBPF26B4DH59 902 aa15.1■□□□□ 0.01
CAPNS1-209ENST00000590049 MAP3K11Q16584 847 aa15.1■□□□□ 0.01
CAPNS1-209ENST00000590049 NBPF9Q3BBW0 867 aa15.1■□□□□ 0.01
CAPNS1-209ENST00000590049 RSBN1LQ6PCB5 846 aaPredicted RBP15.1■□□□□ 0.01
CAPNS1-209ENST00000590049 SRRDQ9UH36 339 aa15.1■□□□□ 0.01
CAPNS1-209ENST00000590049 DDX60Q8IY21 1712 aaKnown RBP15.09■□□□□ 0.01
CAPNS1-209ENST00000590049 WDHD1O75717 1129 aaPredicted RBP15.09■□□□□ 0.01
CAPNS1-209ENST00000590049 TEFQ10587 303 aa15.09■□□□□ 0.01
CAPNS1-209ENST00000590049 SUSD4Q5VX71 490 aa15.09■□□□□ 0.01
CAPNS1-209ENST00000590049 UNC93B1Q9H1C4 597 aa15.09■□□□□ 0.01
CAPNS1-209ENST00000590049 FZD1Q9UP38 647 aa15.09■□□□□ 0.01
CAPNS1-209ENST00000590049 U2SURPO15042 1029 aaKnown RBP15.08■□□□□ 0
CAPNS1-209ENST00000590049 HOXD10P28358 340 aa15.08■□□□□ 0
CAPNS1-209ENST00000590049 GJA5P36382 358 aa15.08■□□□□ 0
CAPNS1-209ENST00000590049 TMC4Q7Z404 712 aa15.08■□□□□ 0
CAPNS1-209ENST00000590049 ATXN2LQ8WWM7 1075 aaKnown RBP15.08■□□□□ 0
CAPNS1-209ENST00000590049 EYA3Q99504 573 aa15.08■□□□□ 0
CAPNS1-209ENST00000590049 ZSWIM8A7E2V4 1837 aa15.08■□□□□ 0
CAPNS1-209ENST00000590049 C6orf229H3BNL8 230 aa15.07■□□□□ 0
CAPNS1-209ENST00000590049 NTSR2O95665 410 aa15.07■□□□□ 0
CAPNS1-209ENST00000590049 GPTP24298 496 aa15.07■□□□□ 0
CAPNS1-209ENST00000590049 NBPF10Q6P3W6 841 aaKnown RBP15.07■□□□□ 0
CAPNS1-209ENST00000590049 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
CAPNS1-209ENST00000590049 NSFL1CQ9UNZ2 370 aaKnown RBP15.07■□□□□ 0
CAPNS1-209ENST00000590049 UBN2Q6ZU65 1347 aa15.07■□□□□ 0
CAPNS1-209ENST00000590049 ERVV-1B6SEH8 477 aa15.06■□□□□ 0
CAPNS1-209ENST00000590049 PPP1R12BO60237 982 aaPredicted RBP15.06■□□□□ 0
CAPNS1-209ENST00000590049 GRAPQ13588 217 aa15.06■□□□□ 0
CAPNS1-209ENST00000590049 DDX46Q7L014 1031 aaKnown RBP15.06■□□□□ 0
CAPNS1-209ENST00000590049 USP38Q8NB14 1042 aa15.06■□□□□ 0
CAPNS1-209ENST00000590049 GRAPLQ8TC17 118 aaPredicted RBP15.06■□□□□ 0
CAPNS1-209ENST00000590049 ASB2Q96Q27 587 aa15.06■□□□□ 0
CAPNS1-209ENST00000590049 GMLQ99445 158 aa15.06■□□□□ 0
CAPNS1-209ENST00000590049 PNNQ9H307 717 aaKnown RBP15.06■□□□□ 0
CAPNS1-209ENST00000590049 TLR2O60603 784 aa15.05■□□□□ -0
CAPNS1-209ENST00000590049 NEFMP07197 916 aa15.05■□□□□ -0
CAPNS1-209ENST00000590049 U2AF1L5P0DN76 240 aaPredicted RBP15.05■□□□□ -0
CAPNS1-209ENST00000590049 U2AF1Q01081 240 aaKnown RBP eCLIP15.05■□□□□ -0
CAPNS1-209ENST00000590049 APOBEC3FQ8IUX4 373 aaKnown RBP15.05■□□□□ -0
CAPNS1-209ENST00000590049 DEFB118Q96PH6 123 aa15.05■□□□□ -0
CAPNS1-209ENST00000590049 SCN9AQ15858 1988 aa15.04■□□□□ -0
CAPNS1-209ENST00000590049 G3V3G9 751 aa15.04■□□□□ -0
CAPNS1-209ENST00000590049 MTHFSDQ2M296 383 aaKnown RBP15.04■□□□□ -0
CAPNS1-209ENST00000590049 DCAF8Q5TAQ9 597 aa15.04■□□□□ -0
CAPNS1-209ENST00000590049 PPP1R42Q7Z4L9 355 aa15.04■□□□□ -0
CAPNS1-209ENST00000590049 HELBQ8NG08 1087 aaPredicted RBP15.04■□□□□ -0
CAPNS1-209ENST00000590049 DIS3LQ8TF46 1054 aaKnown RBP15.04■□□□□ -0
CAPNS1-209ENST00000590049 MS4A4AQ96JQ5 239 aa15.04■□□□□ -0
CAPNS1-209ENST00000590049 POLLQ9UGP5 575 aa15.04■□□□□ -0
CAPNS1-209ENST00000590049 COL3A1P02461 1466 aaPredicted RBP15.03■□□□□ -0
CAPNS1-209ENST00000590049 MYPNQ86TC9 1320 aa15.03■□□□□ -0
CAPNS1-209ENST00000590049 WNT10BO00744 389 aa15.03■□□□□ -0
CAPNS1-209ENST00000590049 OSBPP22059 807 aa15.03■□□□□ -0
CAPNS1-209ENST00000590049 FOXK2Q01167 660 aa15.03■□□□□ -0
CAPNS1-209ENST00000590049 TMEM31Q5JXX7 168 aa15.03■□□□□ -0
CAPNS1-209ENST00000590049 SLC10A5Q5PT55 438 aa15.03■□□□□ -0
CAPNS1-209ENST00000590049 SLAIN1Q8ND83 568 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms