RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 MPNDQ8N594 471 aa17.12■□□□□ 0.33
NLE1-205ENST00000588642 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
NLE1-205ENST00000588642 PODXL2Q9NZ53 605 aa17.12■□□□□ 0.33
NLE1-205ENST00000588642 PIM2Q9P1W9 311 aa17.12■□□□□ 0.33
NLE1-205ENST00000588642 UQCRFS1P1P0C7P4 283 aa17.11■□□□□ 0.33
NLE1-205ENST00000588642 PHKA1P46020 1223 aa17.11■□□□□ 0.33
NLE1-205ENST00000588642 BCAMP50895 628 aa17.11■□□□□ 0.33
NLE1-205ENST00000588642 DPP8Q6V1X1 898 aaPredicted RBP17.11■□□□□ 0.33
NLE1-205ENST00000588642 VPS37DQ86XT2 251 aa17.11■□□□□ 0.33
NLE1-205ENST00000588642 TAF1P21675 1872 aa17.1■□□□□ 0.33
NLE1-205ENST00000588642 GYG1P46976 350 aa17.1■□□□□ 0.33
NLE1-205ENST00000588642 CC2D2BQ6DHV5 1058 aa17.1■□□□□ 0.33
NLE1-205ENST00000588642 TBC1D16Q8TBP0 767 aa17.1■□□□□ 0.33
NLE1-205ENST00000588642 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.1■□□□□ 0.33
NLE1-205ENST00000588642 DNAJC2Q99543 621 aaKnown RBP17.1■□□□□ 0.33
NLE1-205ENST00000588642 HAUS7Q99871 368 aa17.1■□□□□ 0.33
NLE1-205ENST00000588642 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
NLE1-205ENST00000588642 POLLQ9UGP5 575 aa17.1■□□□□ 0.33
NLE1-205ENST00000588642 C21orf2O43822 256 aa17.09■□□□□ 0.33
NLE1-205ENST00000588642 KLRK1P26718 216 aa17.09■□□□□ 0.33
NLE1-205ENST00000588642 HIBADHP31937 336 aaKnown RBP17.09■□□□□ 0.33
NLE1-205ENST00000588642 DALRD3Q5D0E6 543 aaKnown RBP17.09■□□□□ 0.33
NLE1-205ENST00000588642 FBXO33Q7Z6M2 555 aa17.09■□□□□ 0.33
NLE1-205ENST00000588642 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
NLE1-205ENST00000588642 C7orf43Q8WVR3 580 aa17.09■□□□□ 0.33
NLE1-205ENST00000588642 ZNF512BQ96KM6 892 aaPredicted RBP17.09■□□□□ 0.33
NLE1-205ENST00000588642 FAM84BQ96KN1 310 aaPredicted RBP17.09■□□□□ 0.33
NLE1-205ENST00000588642 SNRKQ9NRH2 765 aa17.09■□□□□ 0.33
NLE1-205ENST00000588642 FKBP4Q02790 459 aaKnown RBP eCLIP17.08■□□□□ 0.32
NLE1-205ENST00000588642 EVI5LQ96CN4 794 aa17.08■□□□□ 0.32
NLE1-205ENST00000588642 GPR101Q96P66 508 aaPredicted RBP17.08■□□□□ 0.32
NLE1-205ENST00000588642 WWC3Q9ULE0 1092 aa17.08■□□□□ 0.32
NLE1-205ENST00000588642 COL11A2P13942 1736 aaPredicted RBP17.07■□□□□ 0.32
NLE1-205ENST00000588642 FRAT2O75474 233 aaPredicted RBP17.07■□□□□ 0.32
NLE1-205ENST00000588642 ARID4AP29374 1257 aaPredicted RBP17.07■□□□□ 0.32
NLE1-205ENST00000588642 GRIPAP1Q4V328 841 aa17.07■□□□□ 0.32
NLE1-205ENST00000588642 C15orf52Q6ZUT6 534 aaKnown RBP17.07■□□□□ 0.32
NLE1-205ENST00000588642 TXNRD3Q86VQ6 643 aa17.07■□□□□ 0.32
NLE1-205ENST00000588642 NDUFB9Q9Y6M9 179 aa17.07■□□□□ 0.32
NLE1-205ENST00000588642 SPEF2Q9C093 1822 aa17.07■□□□□ 0.32
NLE1-205ENST00000588642 GOLIM4O00461 696 aa17.06■□□□□ 0.32
NLE1-205ENST00000588642 RIMBP2O15034 1052 aa17.06■□□□□ 0.32
NLE1-205ENST00000588642 CDC45O75419 566 aa17.06■□□□□ 0.32
NLE1-205ENST00000588642 MCAMP43121 646 aa17.06■□□□□ 0.32
NLE1-205ENST00000588642 SCARF1Q14162 830 aa17.06■□□□□ 0.32
NLE1-205ENST00000588642 CCDC93Q567U6 631 aa17.06■□□□□ 0.32
NLE1-205ENST00000588642 ZNF804AQ7Z570 1209 aa17.06■□□□□ 0.32
NLE1-205ENST00000588642 RTKN2Q8IZC4 609 aa17.06■□□□□ 0.32
NLE1-205ENST00000588642 EDC3Q96F86 508 aaKnown RBP17.06■□□□□ 0.32
NLE1-205ENST00000588642 EYA3Q99504 573 aa17.06■□□□□ 0.32
NLE1-205ENST00000588642 ZC3H12CQ9C0D7 883 aaKnown RBP17.06■□□□□ 0.32
NLE1-205ENST00000588642 PAG1Q9NWQ8 432 aa17.06■□□□□ 0.32
NLE1-205ENST00000588642 IQSEC3Q9UPP2 1182 aaPredicted RBP17.06■□□□□ 0.32
NLE1-205ENST00000588642 ZAP70P43403 619 aa17.05■□□□□ 0.32
NLE1-205ENST00000588642 SOGA3Q5TF21 947 aa17.05■□□□□ 0.32
NLE1-205ENST00000588642 CASC1Q6TDU7 716 aa17.05■□□□□ 0.32
NLE1-205ENST00000588642 SPATA5Q8NB90 893 aa17.05■□□□□ 0.32
NLE1-205ENST00000588642 NLGN2Q8NFZ4 835 aa17.05■□□□□ 0.32
NLE1-205ENST00000588642 FSD1Q9BTV5 496 aa17.05■□□□□ 0.32
NLE1-205ENST00000588642 FHDC1Q9C0D6 1143 aaPredicted RBP17.05■□□□□ 0.32
NLE1-205ENST00000588642 HMG20BQ9P0W2 317 aa17.05■□□□□ 0.32
NLE1-205ENST00000588642 IRS2Q9Y4H2 1338 aa17.04■□□□□ 0.32
NLE1-205ENST00000588642 G3V3G9 751 aa17.04■□□□□ 0.32
NLE1-205ENST00000588642 RASGRF1Q13972 1273 aa17.04■□□□□ 0.32
NLE1-205ENST00000588642 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
NLE1-205ENST00000588642 C8orf34Q49A92 452 aa17.04■□□□□ 0.32
NLE1-205ENST00000588642 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
NLE1-205ENST00000588642 PI16Q6UXB8 463 aa17.04■□□□□ 0.32
NLE1-205ENST00000588642 SUPT20HQ8NEM7 779 aa17.04■□□□□ 0.32
NLE1-205ENST00000588642 BCS1LQ9Y276 419 aa17.04■□□□□ 0.32
NLE1-205ENST00000588642 SEMA3EO15041 775 aa17.03■□□□□ 0.32
NLE1-205ENST00000588642 TBC1D9Q6ZT07 1266 aa17.03■□□□□ 0.32
NLE1-205ENST00000588642 RTFDC1Q9BY42 306 aaPredicted RBP17.03■□□□□ 0.32
NLE1-205ENST00000588642 BACH2Q9BYV9 841 aa17.03■□□□□ 0.32
NLE1-205ENST00000588642 DENND2AQ9ULE3 1009 aa17.03■□□□□ 0.32
NLE1-205ENST00000588642 MED23Q9ULK4 1368 aa17.02■□□□□ 0.32
NLE1-205ENST00000588642 CHAF1AQ13111 956 aaPredicted RBP17.02■□□□□ 0.32
NLE1-205ENST00000588642 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
NLE1-205ENST00000588642 KBTBD3Q8NAB2 608 aa17.02■□□□□ 0.32
NLE1-205ENST00000588642 ANTXR1Q9H6X2 564 aa17.02■□□□□ 0.32
NLE1-205ENST00000588642 CD209Q9NNX6 404 aa17.02■□□□□ 0.32
NLE1-205ENST00000588642 CYP2E1P05181 493 aaPredicted RBP17.01■□□□□ 0.31
NLE1-205ENST00000588642 CHMLP26374 656 aa17.01■□□□□ 0.31
NLE1-205ENST00000588642 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
NLE1-205ENST00000588642 COA1Q9GZY4 146 aa17.01■□□□□ 0.31
NLE1-205ENST00000588642 DIAPH3Q9NSV4 1193 aa17.01■□□□□ 0.31
NLE1-205ENST00000588642 SLX4Q8IY92 1834 aa17■□□□□ 0.31
NLE1-205ENST00000588642 KIF13BQ9NQT8 1826 aa17■□□□□ 0.31
NLE1-205ENST00000588642 HIP1O00291 1037 aa17■□□□□ 0.31
NLE1-205ENST00000588642 DOK7Q18PE1 504 aa17■□□□□ 0.31
NLE1-205ENST00000588642 LRRFIP1Q32MZ4 808 aaKnown RBP17■□□□□ 0.31
NLE1-205ENST00000588642 PSMD1Q99460 953 aa17■□□□□ 0.31
NLE1-205ENST00000588642 SYT17Q9BSW7 474 aa17■□□□□ 0.31
NLE1-205ENST00000588642 PIH1D3Q9NQM4 214 aaKnown RBP17■□□□□ 0.31
NLE1-205ENST00000588642 IL1R1P14778 569 aa16.99■□□□□ 0.31
NLE1-205ENST00000588642 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.99■□□□□ 0.31
NLE1-205ENST00000588642 LRRC37AA6NMS7 1700 aa16.99■□□□□ 0.31
NLE1-205ENST00000588642 PPIP5K2O43314 1243 aa16.98■□□□□ 0.31
NLE1-205ENST00000588642 IDH1O75874 414 aaKnown RBP16.98■□□□□ 0.31
NLE1-205ENST00000588642 TICAM2Q86XR7 235 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms