RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 TRPM7Q96QT4 1865 aa29.39■■■□□ 2.3
LSM7-204ENST00000587502 BRPF1P55201 1214 aaPredicted RBP29.38■■■□□ 2.29
LSM7-204ENST00000587502 RBM26Q5T8P6 1007 aaKnown RBP29.38■■■□□ 2.29
LSM7-204ENST00000587502 STRIP1Q5VSL9 837 aa29.38■■■□□ 2.29
LSM7-204ENST00000587502 CNNM1Q9NRU3 951 aa29.38■■■□□ 2.29
LSM7-204ENST00000587502 MYO3BQ8WXR4 1341 aa29.38■■■□□ 2.29
LSM7-204ENST00000587502 USP17L8P0C7I0 530 aa29.37■■■□□ 2.29
LSM7-204ENST00000587502 MMP14P50281 582 aa29.37■■■□□ 2.29
LSM7-204ENST00000587502 CST9Q5W186 159 aa29.37■■■□□ 2.29
LSM7-204ENST00000587502 C15orf52Q6ZUT6 534 aaKnown RBP29.37■■■□□ 2.29
LSM7-204ENST00000587502 TXNRD3Q86VQ6 643 aa29.37■■■□□ 2.29
LSM7-204ENST00000587502 DCPSQ96C86 337 aaKnown RBP29.37■■■□□ 2.29
LSM7-204ENST00000587502 GMLQ99445 158 aa29.37■■■□□ 2.29
LSM7-204ENST00000587502 VEGFBP49765 207 aa29.36■■■□□ 2.29
LSM7-204ENST00000587502 FMR1Q06787 632 aaKnown RBP eCLIP29.36■■■□□ 2.29
LSM7-204ENST00000587502 KAZALD1Q96I82 304 aa29.36■■■□□ 2.29
LSM7-204ENST00000587502 TAF5LO75529 589 aa29.35■■■□□ 2.29
LSM7-204ENST00000587502 CELF2O95319 508 aaKnown RBP29.35■■■□□ 2.29
LSM7-204ENST00000587502 EGFRP00533 1210 aa29.35■■■□□ 2.29
LSM7-204ENST00000587502 RABL6Q3YEC7 729 aaPredicted RBP29.35■■■□□ 2.29
LSM7-204ENST00000587502 ZNF594Q96JF6 807 aaPredicted RBP29.35■■■□□ 2.29
LSM7-204ENST00000587502 DACT2Q5SW24 774 aa29.34■■■□□ 2.29
LSM7-204ENST00000587502 TTLL5Q6EMB2 1281 aa29.34■■■□□ 2.29
LSM7-204ENST00000587502 KRT26Q7Z3Y9 468 aa29.34■■■□□ 2.29
LSM7-204ENST00000587502 HELBQ8NG08 1087 aaPredicted RBP29.34■■■□□ 2.29
LSM7-204ENST00000587502 FBXW7Q969H0 707 aa29.34■■■□□ 2.29
LSM7-204ENST00000587502 API5Q9BZZ5 524 aaKnown RBP29.34■■■□□ 2.29
LSM7-204ENST00000587502 BICC1Q9H694 974 aaKnown RBP29.34■■■□□ 2.29
LSM7-204ENST00000587502 HSPA1AP0DMV8 641 aaKnown RBP29.33■■■□□ 2.29
LSM7-204ENST00000587502 HSPA1BP0DMV9 641 aaKnown RBP29.33■■■□□ 2.29
LSM7-204ENST00000587502 USP48Q86UV5 1035 aa29.33■■■□□ 2.29
LSM7-204ENST00000587502 OGFOD1Q8N543 542 aa29.33■■■□□ 2.29
LSM7-204ENST00000587502 USP44Q9H0E7 712 aa29.33■■■□□ 2.29
LSM7-204ENST00000587502 TLL2Q9Y6L7 1015 aa29.33■■■□□ 2.29
LSM7-204ENST00000587502 KLRK1P26718 216 aa29.32■■■□□ 2.28
LSM7-204ENST00000587502 ECE1P42892 770 aa29.32■■■□□ 2.28
LSM7-204ENST00000587502 CD209Q9NNX6 404 aa29.32■■■□□ 2.28
LSM7-204ENST00000587502 MYOZ2Q9NPC6 264 aa29.32■■■□□ 2.28
LSM7-204ENST00000587502 NOB1Q9ULX3 412 aaKnown RBP29.32■■■□□ 2.28
LSM7-204ENST00000587502 ZNF804AQ7Z570 1209 aa29.31■■■□□ 2.28
LSM7-204ENST00000587502 WDR33Q9C0J8 1336 aaKnown RBP29.3■■■□□ 2.28
LSM7-204ENST00000587502 PLIN1O60240 522 aa29.3■■■□□ 2.28
LSM7-204ENST00000587502 RARSP54136 660 aaKnown RBP29.3■■■□□ 2.28
LSM7-204ENST00000587502 COL13A1Q5TAT6 717 aaPredicted RBP29.3■■■□□ 2.28
LSM7-204ENST00000587502 SULF1Q8IWU6 871 aa29.3■■■□□ 2.28
LSM7-204ENST00000587502 MROH5Q6ZUA9 1318 aa29.29■■■□□ 2.28
LSM7-204ENST00000587502 IRS2Q9Y4H2 1338 aa29.29■■■□□ 2.28
LSM7-204ENST00000587502 UBE4AQ14139 1066 aa29.29■■■□□ 2.28
LSM7-204ENST00000587502 SCARF1Q14162 830 aa29.29■■■□□ 2.28
LSM7-204ENST00000587502 ANKRD44Q8N8A2 993 aa29.29■■■□□ 2.28
LSM7-204ENST00000587502 HHIPL1Q96JK4 782 aa29.29■■■□□ 2.28
LSM7-204ENST00000587502 ZNF408Q9H9D4 720 aa29.29■■■□□ 2.28
LSM7-204ENST00000587502 GGA3Q9NZ52 723 aa29.29■■■□□ 2.28
LSM7-204ENST00000587502 HDAC5Q9UQL6 1122 aa29.29■■■□□ 2.28
LSM7-204ENST00000587502 KIF16BQ96L93 1317 aa29.28■■■□□ 2.28
LSM7-204ENST00000587502 CAPN15O75808 1086 aa29.28■■■□□ 2.28
LSM7-204ENST00000587502 GTF2IP78347 998 aa29.28■■■□□ 2.28
LSM7-204ENST00000587502 SAPCD2Q86UD0 394 aa29.28■■■□□ 2.28
LSM7-204ENST00000587502 ARHGAP45Q92619 1136 aa29.28■■■□□ 2.28
LSM7-204ENST00000587502 SNAP23O00161 211 aa29.27■■■□□ 2.28
LSM7-204ENST00000587502 IL1R1P14778 569 aa29.27■■■□□ 2.28
LSM7-204ENST00000587502 PAXIP1Q6ZW49 1069 aaPredicted RBP29.27■■■□□ 2.28
LSM7-204ENST00000587502 HDAC9Q9UKV0 1011 aa29.27■■■□□ 2.28
LSM7-204ENST00000587502 RIPOR2Q9Y4F9 1068 aa29.27■■■□□ 2.28
LSM7-204ENST00000587502 A0A1B0GUL6 1792 aa29.26■■■□□ 2.28
LSM7-204ENST00000587502 PITPNM2Q9BZ72 1349 aa29.26■■■□□ 2.27
LSM7-204ENST00000587502 HNRNPUQ00839 825 aaKnown RBP eCLIP29.26■■■□□ 2.27
LSM7-204ENST00000587502 CAPNS2Q96L46 248 aa29.26■■■□□ 2.27
LSM7-204ENST00000587502 POLR2AP24928 1970 aaKnown RBP29.26■■■□□ 2.27
LSM7-204ENST00000587502 AIDAQ96BJ3 306 aa29.25■■■□□ 2.27
LSM7-204ENST00000587502 MXD3Q9BW11 206 aa29.25■■■□□ 2.27
LSM7-204ENST00000587502 MAP2K1Q02750 393 aaPredicted RBP29.24■■■□□ 2.27
LSM7-204ENST00000587502 ANGEL2Q5VTE6 544 aaKnown RBP29.24■■■□□ 2.27
LSM7-204ENST00000587502 PUS3Q9BZE2 481 aaKnown RBP29.24■■■□□ 2.27
LSM7-204ENST00000587502 ADM5C9JUS6 153 aa29.23■■■□□ 2.27
LSM7-204ENST00000587502 IPO8O15397 1037 aaKnown RBP29.23■■■□□ 2.27
LSM7-204ENST00000587502 UBTFL1P0CB47 393 aaPredicted RBP29.23■■■□□ 2.27
LSM7-204ENST00000587502 FKBP1AP62942 108 aaKnown RBP29.23■■■□□ 2.27
LSM7-204ENST00000587502 C2orf69Q8N8R5 385 aa29.23■■■□□ 2.27
LSM7-204ENST00000587502 CYP4F22Q6NT55 531 aa29.22■■■□□ 2.27
LSM7-204ENST00000587502 METTL24Q5JXM2 366 aa29.21■■■□□ 2.27
LSM7-204ENST00000587502 KIAA0825Q8IV33 1275 aa29.21■■■□□ 2.27
LSM7-204ENST00000587502 GBA2Q9HCG7 927 aaPredicted RBP29.21■■■□□ 2.27
LSM7-204ENST00000587502 WBP1LQ9NX94 342 aa29.21■■■□□ 2.27
LSM7-204ENST00000587502 ZNF646O15015 1829 aaPredicted RBP29.21■■■□□ 2.27
LSM7-204ENST00000587502 ASTN2O75129 1339 aaPredicted RBP29.2■■■□□ 2.27
LSM7-204ENST00000587502 SASH1O94885 1247 aa29.2■■■□□ 2.26
LSM7-204ENST00000587502 HIBADHP31937 336 aaKnown RBP29.2■■■□□ 2.26
LSM7-204ENST00000587502 MAP2K2P36507 400 aa29.2■■■□□ 2.26
LSM7-204ENST00000587502 LRRC24Q50LG9 513 aa29.19■■■□□ 2.26
LSM7-204ENST00000587502 WNT10BO00744 389 aa29.18■■■□□ 2.26
LSM7-204ENST00000587502 PDE8BO95263 885 aa29.18■■■□□ 2.26
LSM7-204ENST00000587502 HUNKP57058 714 aa29.18■■■□□ 2.26
LSM7-204ENST00000587502 GRM1Q13255 1194 aa29.18■■■□□ 2.26
LSM7-204ENST00000587502 NBPF9Q3BBW0 867 aa29.18■■■□□ 2.26
LSM7-204ENST00000587502 TNS4Q8IZW8 715 aa29.18■■■□□ 2.26
LSM7-204ENST00000587502 CDCA5Q96FF9 252 aa29.18■■■□□ 2.26
LSM7-204ENST00000587502 INTS3Q68E01 1043 aaKnown RBP29.17■■■□□ 2.26
LSM7-204ENST00000587502 DLK2Q6UY11 383 aa29.17■■■□□ 2.26
LSM7-204ENST00000587502 VPS37DQ86XT2 251 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms