RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 DBNDD1Q9H9R9 158 aa21.5■■□□□ 1.03
DNMT1-212ENST00000587197 CNNM1Q9NRU3 951 aa21.5■■□□□ 1.03
DNMT1-212ENST00000587197 PASKQ96RG2 1323 aa21.5■■□□□ 1.03
DNMT1-212ENST00000587197 YDJCA8MPS7 323 aa21.49■■□□□ 1.03
DNMT1-212ENST00000587197 ITGBL1O95965 494 aaPredicted RBP21.49■■□□□ 1.03
DNMT1-212ENST00000587197 LEMD3Q9Y2U8 911 aa21.49■■□□□ 1.03
DNMT1-212ENST00000587197 SUPT16HQ9Y5B9 1047 aaKnown RBP21.49■■□□□ 1.03
DNMT1-212ENST00000587197 H7C1D1 291 aa21.48■■□□□ 1.03
DNMT1-212ENST00000587197 EYA2O00167 538 aa21.48■■□□□ 1.03
DNMT1-212ENST00000587197 ECE2O60344 883 aa21.48■■□□□ 1.03
DNMT1-212ENST00000587197 CIAO1O76071 339 aa21.48■■□□□ 1.03
DNMT1-212ENST00000587197 POLA2Q14181 598 aa21.48■■□□□ 1.03
DNMT1-212ENST00000587197 MAP1SQ66K74 1059 aaPredicted RBP21.48■■□□□ 1.03
DNMT1-212ENST00000587197 SSH3Q8TE77 659 aa21.48■■□□□ 1.03
DNMT1-212ENST00000587197 C1orf115Q9H7X2 142 aa21.48■■□□□ 1.03
DNMT1-212ENST00000587197 MROH5Q6ZUA9 1318 aa21.48■■□□□ 1.03
DNMT1-212ENST00000587197 ADAMTSL1Q8N6G6 1762 aa21.48■■□□□ 1.03
DNMT1-212ENST00000587197 DOK7Q18PE1 504 aa21.47■■□□□ 1.03
DNMT1-212ENST00000587197 CEP85Q6P2H3 762 aa21.47■■□□□ 1.03
DNMT1-212ENST00000587197 RPAP2Q8IXW5 612 aaPredicted RBP21.47■■□□□ 1.03
DNMT1-212ENST00000587197 JMYQ8N9B5 988 aa21.47■■□□□ 1.03
DNMT1-212ENST00000587197 KLHDC4Q8TBB5 520 aa21.47■■□□□ 1.03
DNMT1-212ENST00000587197 DPF2Q92785 391 aa21.47■■□□□ 1.03
DNMT1-212ENST00000587197 PUS3Q9BZE2 481 aaKnown RBP21.47■■□□□ 1.03
DNMT1-212ENST00000587197 LTBP1Q14766 1721 aa21.46■■□□□ 1.03
DNMT1-212ENST00000587197 PNMA6EA0A0J9YXQ4 647 aa21.46■■□□□ 1.03
DNMT1-212ENST00000587197 TMEM88BA6NKF7 163 aa21.46■■□□□ 1.03
DNMT1-212ENST00000587197 RPS12P25398 132 aaKnown RBP21.46■■□□□ 1.03
DNMT1-212ENST00000587197 LRRC24Q50LG9 513 aa21.46■■□□□ 1.03
DNMT1-212ENST00000587197 CNOT7Q9UIV1 285 aaKnown RBP21.46■■□□□ 1.03
DNMT1-212ENST00000587197 PSMD14O00487 310 aa21.45■■□□□ 1.02
DNMT1-212ENST00000587197 GPR101Q96P66 508 aaPredicted RBP21.45■■□□□ 1.02
DNMT1-212ENST00000587197 IL15P40933 162 aaPredicted RBP21.44■■□□□ 1.02
DNMT1-212ENST00000587197 AAMPQ13685 434 aa21.44■■□□□ 1.02
DNMT1-212ENST00000587197 ATG9AQ7Z3C6 839 aa21.44■■□□□ 1.02
DNMT1-212ENST00000587197 CEP350Q5VT06 3117 aa21.44■■□□□ 1.02
DNMT1-212ENST00000587197 UBE4AQ14139 1066 aa21.43■■□□□ 1.02
DNMT1-212ENST00000587197 C15orf52Q6ZUT6 534 aaKnown RBP21.43■■□□□ 1.02
DNMT1-212ENST00000587197 VGLL2Q8N8G2 317 aa21.43■■□□□ 1.02
DNMT1-212ENST00000587197 ZC3H15Q8WU90 426 aaKnown RBP21.43■■□□□ 1.02
DNMT1-212ENST00000587197 CRBNQ96SW2 442 aa21.43■■□□□ 1.02
DNMT1-212ENST00000587197 PA2G4Q9UQ80 394 aaKnown RBP21.43■■□□□ 1.02
DNMT1-212ENST00000587197 ZNF804BA4D1E1 1349 aa21.43■■□□□ 1.02
DNMT1-212ENST00000587197 METTL24Q5JXM2 366 aa21.42■■□□□ 1.02
DNMT1-212ENST00000587197 PODNQ7Z5L7 613 aa21.42■■□□□ 1.02
DNMT1-212ENST00000587197 MICALL2Q8IY33 904 aa21.42■■□□□ 1.02
DNMT1-212ENST00000587197 HELBQ8NG08 1087 aaPredicted RBP21.42■■□□□ 1.02
DNMT1-212ENST00000587197 MED23Q9ULK4 1368 aa21.42■■□□□ 1.02
DNMT1-212ENST00000587197 NOP58Q9Y2X3 529 aaKnown RBP21.42■■□□□ 1.02
DNMT1-212ENST00000587197 ZBTB12Q9Y330 459 aaPredicted RBP21.42■■□□□ 1.02
DNMT1-212ENST00000587197 HMMRO75330 724 aa21.41■■□□□ 1.02
DNMT1-212ENST00000587197 TAF5LO75529 589 aa21.41■■□□□ 1.02
DNMT1-212ENST00000587197 PDE8BO95263 885 aa21.41■■□□□ 1.02
DNMT1-212ENST00000587197 KCNJ4P48050 445 aa21.41■■□□□ 1.02
DNMT1-212ENST00000587197 SIL1Q9H173 461 aa21.41■■□□□ 1.02
DNMT1-212ENST00000587197 VIL1P09327 827 aaKnown RBP21.4■■□□□ 1.02
DNMT1-212ENST00000587197 CEP126Q9P2H0 1117 aa21.4■■□□□ 1.02
DNMT1-212ENST00000587197 MKRN1Q9UHC7 482 aaKnown RBP21.4■■□□□ 1.02
DNMT1-212ENST00000587197 SPEF2Q9C093 1822 aa21.39■■□□□ 1.02
DNMT1-212ENST00000587197 WTIPA6NIX2 430 aaPredicted RBP21.39■■□□□ 1.01
DNMT1-212ENST00000587197 G3BP1Q13283 466 aaKnown RBP eCLIP21.39■■□□□ 1.01
DNMT1-212ENST00000587197 SIRT2Q8IXJ6 389 aa21.39■■□□□ 1.01
DNMT1-212ENST00000587197 KCNQ5Q9NR82 932 aa21.39■■□□□ 1.01
DNMT1-212ENST00000587197 PGAP2Q9UHJ9 254 aa21.39■■□□□ 1.01
DNMT1-212ENST00000587197 IRS2Q9Y4H2 1338 aa21.38■■□□□ 1.01
DNMT1-212ENST00000587197 AGBL3Q8NEM8 1001 aa21.38■■□□□ 1.01
DNMT1-212ENST00000587197 CNTNAP1P78357 1384 aa21.37■■□□□ 1.01
DNMT1-212ENST00000587197 USP17L3A6NCW0 530 aa21.37■■□□□ 1.01
DNMT1-212ENST00000587197 USP17L4A6NCW7 530 aa21.37■■□□□ 1.01
DNMT1-212ENST00000587197 FGFR2P21802 821 aa21.37■■□□□ 1.01
DNMT1-212ENST00000587197 PUM3Q15397 648 aaKnown RBP21.37■■□□□ 1.01
DNMT1-212ENST00000587197 RSBN1LQ6PCB5 846 aaPredicted RBP21.37■■□□□ 1.01
DNMT1-212ENST00000587197 CDC37L1Q7L3B6 337 aa21.37■■□□□ 1.01
DNMT1-212ENST00000587197 USP17L1Q7RTZ2 530 aa21.37■■□□□ 1.01
DNMT1-212ENST00000587197 TRPM4Q8TD43 1214 aa21.37■■□□□ 1.01
DNMT1-212ENST00000587197 COA1Q9GZY4 146 aa21.37■■□□□ 1.01
DNMT1-212ENST00000587197 ABT1Q9ULW3 272 aaKnown RBP21.37■■□□□ 1.01
DNMT1-212ENST00000587197 SNAP23O00161 211 aa21.36■■□□□ 1.01
DNMT1-212ENST00000587197 SURF6O75683 361 aaKnown RBP21.36■■□□□ 1.01
DNMT1-212ENST00000587197 HIRAP54198 1017 aaPredicted RBP21.36■■□□□ 1.01
DNMT1-212ENST00000587197 DEFB115Q30KQ5 88 aa21.36■■□□□ 1.01
DNMT1-212ENST00000587197 HSP90AB4PQ58FF6 505 aa21.36■■□□□ 1.01
DNMT1-212ENST00000587197 SAMD7Q7Z3H4 446 aa21.36■■□□□ 1.01
DNMT1-212ENST00000587197 CENPBP07199 599 aaPredicted RBP21.35■■□□□ 1.01
DNMT1-212ENST00000587197 TBC1D10BQ4KMP7 808 aaPredicted RBP21.35■■□□□ 1.01
DNMT1-212ENST00000587197 TXNRD3Q86VQ6 643 aa21.35■■□□□ 1.01
DNMT1-212ENST00000587197 LPIN2Q92539 896 aa21.35■■□□□ 1.01
DNMT1-212ENST00000587197 SHTN1A0MZ66 631 aa21.34■■□□□ 1.01
DNMT1-212ENST00000587197 IFIT1P09914 478 aaKnown RBP21.34■■□□□ 1.01
DNMT1-212ENST00000587197 KLRK1P26718 216 aa21.34■■□□□ 1.01
DNMT1-212ENST00000587197 RBM26Q5T8P6 1007 aaKnown RBP21.34■■□□□ 1.01
DNMT1-212ENST00000587197 AKAP2Q9Y2D5 859 aa21.34■■□□□ 1.01
DNMT1-212ENST00000587197 PCDHB15Q9Y5E8 787 aa21.34■■□□□ 1.01
DNMT1-212ENST00000587197 ZNF609O15014 1411 aa21.34■■□□□ 1.01
DNMT1-212ENST00000587197 RASSF10A6NK89 507 aa21.33■■□□□ 1.01
DNMT1-212ENST00000587197 TRAF5O00463 557 aa21.33■■□□□ 1.01
DNMT1-212ENST00000587197 SASH1O94885 1247 aa21.33■■□□□ 1.01
DNMT1-212ENST00000587197 SLC5A1P13866 664 aa21.33■■□□□ 1.01
DNMT1-212ENST00000587197 KIF4BQ2VIQ3 1234 aa21.33■■□□□ 1.01
DNMT1-212ENST00000587197 ZNF804AQ7Z570 1209 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms