RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 USP17L4A6NCW7 530 aa23.97■■□□□ 1.43
TPM4-204ENST00000586499 USP17L1Q7RTZ2 530 aa23.97■■□□□ 1.43
TPM4-204ENST00000586499 MXD3Q9BW11 206 aa23.97■■□□□ 1.43
TPM4-204ENST00000586499 API5Q9BZZ5 524 aaKnown RBP23.97■■□□□ 1.43
TPM4-204ENST00000586499 PGAP2Q9UHJ9 254 aa23.97■■□□□ 1.43
TPM4-204ENST00000586499 TMEM88BA6NKF7 163 aa23.96■■□□□ 1.43
TPM4-204ENST00000586499 BCAR3O75815 825 aa23.96■■□□□ 1.43
TPM4-204ENST00000586499 COA1Q9GZY4 146 aa23.96■■□□□ 1.43
TPM4-204ENST00000586499 MKRN1Q9UHC7 482 aaKnown RBP23.96■■□□□ 1.43
TPM4-204ENST00000586499 A0A1B0GUL6 1792 aa23.96■■□□□ 1.43
TPM4-204ENST00000586499 IRS2Q9Y4H2 1338 aa23.95■■□□□ 1.42
TPM4-204ENST00000586499 FBXW7Q969H0 707 aa23.95■■□□□ 1.42
TPM4-204ENST00000586499 GMLQ99445 158 aa23.95■■□□□ 1.42
TPM4-204ENST00000586499 GLIS2Q9BZE0 524 aaPredicted RBP23.95■■□□□ 1.42
TPM4-204ENST00000586499 PSME4Q14997 1843 aa23.94■■□□□ 1.42
TPM4-204ENST00000586499 AGBL3Q8NEM8 1001 aa23.94■■□□□ 1.42
TPM4-204ENST00000586499 KLHDC4Q8TBB5 520 aa23.94■■□□□ 1.42
TPM4-204ENST00000586499 ZC3H15Q8WU90 426 aaKnown RBP23.94■■□□□ 1.42
TPM4-204ENST00000586499 TNNQ9UQP3 1299 aa23.94■■□□□ 1.42
TPM4-204ENST00000586499 DACT2Q5SW24 774 aa23.93■■□□□ 1.42
TPM4-204ENST00000586499 JMYQ8N9B5 988 aa23.93■■□□□ 1.42
TPM4-204ENST00000586499 PCNTO95613 3336 aa23.92■■□□□ 1.42
TPM4-204ENST00000586499 KIF16BQ96L93 1317 aa23.92■■□□□ 1.42
TPM4-204ENST00000586499 LRRC24Q50LG9 513 aa23.92■■□□□ 1.42
TPM4-204ENST00000586499 DLK2Q6UY11 383 aa23.92■■□□□ 1.42
TPM4-204ENST00000586499 ARHGAP45Q92619 1136 aa23.92■■□□□ 1.42
TPM4-204ENST00000586499 FRAT1Q92837 279 aaPredicted RBP23.92■■□□□ 1.42
TPM4-204ENST00000586499 CD209Q9NNX6 404 aa23.92■■□□□ 1.42
TPM4-204ENST00000586499 RIPOR2Q9Y4F9 1068 aa23.92■■□□□ 1.42
TPM4-204ENST00000586499 ZNF280AP59817 542 aaPredicted RBP23.91■■□□□ 1.42
TPM4-204ENST00000586499 KIF4BQ2VIQ3 1234 aa23.91■■□□□ 1.42
TPM4-204ENST00000586499 CST9Q5W186 159 aa23.91■■□□□ 1.42
TPM4-204ENST00000586499 C15orf52Q6ZUT6 534 aaKnown RBP23.91■■□□□ 1.42
TPM4-204ENST00000586499 ASTN2O75129 1339 aaPredicted RBP23.9■■□□□ 1.42
TPM4-204ENST00000586499 ZNF646O15015 1829 aaPredicted RBP23.9■■□□□ 1.42
TPM4-204ENST00000586499 USP17L8P0C7I0 530 aa23.9■■□□□ 1.42
TPM4-204ENST00000586499 UBTFL1P0CB47 393 aaPredicted RBP23.9■■□□□ 1.42
TPM4-204ENST00000586499 GTF2IP78347 998 aa23.9■■□□□ 1.42
TPM4-204ENST00000586499 STRIP1Q5VSL9 837 aa23.9■■□□□ 1.42
TPM4-204ENST00000586499 TTLL5Q6EMB2 1281 aa23.9■■□□□ 1.42
TPM4-204ENST00000586499 USP48Q86UV5 1035 aa23.9■■□□□ 1.42
TPM4-204ENST00000586499 ZNF609O15014 1411 aa23.9■■□□□ 1.42
TPM4-204ENST00000586499 ZBED9Q6R2W3 1325 aa23.89■■□□□ 1.42
TPM4-204ENST00000586499 TRIM27P14373 513 aa23.89■■□□□ 1.41
TPM4-204ENST00000586499 INTS3Q68E01 1043 aaKnown RBP23.89■■□□□ 1.41
TPM4-204ENST00000586499 CDC37L1Q7L3B6 337 aa23.89■■□□□ 1.41
TPM4-204ENST00000586499 MEIS3Q99687 375 aa23.89■■□□□ 1.41
TPM4-204ENST00000586499 RFX5P48382 616 aaPredicted RBP23.88■■□□□ 1.41
TPM4-204ENST00000586499 LRRFIP2Q9Y608 721 aaKnown RBP23.88■■□□□ 1.41
TPM4-204ENST00000586499 CNTNAP1P78357 1384 aa23.88■■□□□ 1.41
TPM4-204ENST00000586499 SCARF1Q14162 830 aa23.87■■□□□ 1.41
TPM4-204ENST00000586499 ATF7IPQ6VMQ6 1270 aa23.87■■□□□ 1.41
TPM4-204ENST00000586499 CLUAP1Q96AJ1 413 aa23.87■■□□□ 1.41
TPM4-204ENST00000586499 MYOZ2Q9NPC6 264 aa23.87■■□□□ 1.41
TPM4-204ENST00000586499 ABT1Q9ULW3 272 aaKnown RBP23.87■■□□□ 1.41
TPM4-204ENST00000586499 MROH5Q6ZUA9 1318 aa23.86■■□□□ 1.41
TPM4-204ENST00000586499 IPO8O15397 1037 aaKnown RBP23.86■■□□□ 1.41
TPM4-204ENST00000586499 UBE4AQ14139 1066 aa23.86■■□□□ 1.41
TPM4-204ENST00000586499 METTL24Q5JXM2 366 aa23.86■■□□□ 1.41
TPM4-204ENST00000586499 ZNF804AQ7Z570 1209 aa23.86■■□□□ 1.41
TPM4-204ENST00000586499 ZNF408Q9H9D4 720 aa23.86■■□□□ 1.41
TPM4-204ENST00000586499 POLR2AP24928 1970 aaKnown RBP23.85■■□□□ 1.41
TPM4-204ENST00000586499 CELF2O95319 508 aaKnown RBP23.85■■□□□ 1.41
TPM4-204ENST00000586499 IL1R1P14778 569 aa23.85■■□□□ 1.41
TPM4-204ENST00000586499 GYG1P46976 350 aa23.85■■□□□ 1.41
TPM4-204ENST00000586499 VEGFBP49765 207 aa23.85■■□□□ 1.41
TPM4-204ENST00000586499 KRT26Q7Z3Y9 468 aa23.85■■□□□ 1.41
TPM4-204ENST00000586499 DCPSQ96C86 337 aaKnown RBP23.85■■□□□ 1.41
TPM4-204ENST00000586499 GGA3Q9NZ52 723 aa23.85■■□□□ 1.41
TPM4-204ENST00000586499 JAG2Q9Y219 1238 aa23.85■■□□□ 1.41
TPM4-204ENST00000586499 TRPM7Q96QT4 1865 aa23.85■■□□□ 1.41
TPM4-204ENST00000586499 RASSF10A6NK89 507 aa23.84■■□□□ 1.41
TPM4-204ENST00000586499 ADM5C9JUS6 153 aa23.84■■□□□ 1.41
TPM4-204ENST00000586499 PTPN12Q05209 780 aaKnown RBP23.84■■□□□ 1.41
TPM4-204ENST00000586499 DEFB115Q30KQ5 88 aa23.84■■□□□ 1.41
TPM4-204ENST00000586499 KIAA0825Q8IV33 1275 aa23.84■■□□□ 1.41
TPM4-204ENST00000586499 CERS5Q8N5B7 392 aa23.84■■□□□ 1.41
TPM4-204ENST00000586499 MYO3BQ8WXR4 1341 aa23.84■■□□□ 1.41
TPM4-204ENST00000586499 ANGEL2Q5VTE6 544 aaKnown RBP23.83■■□□□ 1.41
TPM4-204ENST00000586499 VGLL2Q8N8G2 317 aa23.83■■□□□ 1.41
TPM4-204ENST00000586499 FAM84BQ96KN1 310 aaPredicted RBP23.83■■□□□ 1.41
TPM4-204ENST00000586499 EYA2O00167 538 aa23.82■■□□□ 1.4
TPM4-204ENST00000586499 PDE8BO95263 885 aa23.82■■□□□ 1.4
TPM4-204ENST00000586499 NBPF9Q3BBW0 867 aa23.82■■□□□ 1.4
TPM4-204ENST00000586499 OGFOD1Q8N543 542 aa23.82■■□□□ 1.4
TPM4-204ENST00000586499 SCAF8Q9UPN6 1271 aaKnown RBP23.82■■□□□ 1.4
TPM4-204ENST00000586499 HIBADHP31937 336 aaKnown RBP23.81■■□□□ 1.4
TPM4-204ENST00000586499 ZKSCAN2Q63HK3 967 aa23.81■■□□□ 1.4
TPM4-204ENST00000586499 SIL1Q9H173 461 aa23.81■■□□□ 1.4
TPM4-204ENST00000586499 TLL2Q9Y6L7 1015 aa23.81■■□□□ 1.4
TPM4-204ENST00000586499 ATG9AQ7Z3C6 839 aa23.8■■□□□ 1.4
TPM4-204ENST00000586499 TMEM57Q8N5G2 664 aa23.8■■□□□ 1.4
TPM4-204ENST00000586499 TDRD7Q8NHU6 1098 aaKnown RBP23.8■■□□□ 1.4
TPM4-204ENST00000586499 PA2G4Q9UQ80 394 aaKnown RBP23.8■■□□□ 1.4
TPM4-204ENST00000586499 F8W031 263 aaPredicted RBP23.79■■□□□ 1.4
TPM4-204ENST00000586499 SASH1O94885 1247 aa23.79■■□□□ 1.4
TPM4-204ENST00000586499 GNAI3P08754 354 aa23.79■■□□□ 1.4
TPM4-204ENST00000586499 SULF1Q8IWU6 871 aa23.79■■□□□ 1.4
TPM4-204ENST00000586499 IQSEC3Q9UPP2 1182 aaPredicted RBP23.79■■□□□ 1.4
TPM4-204ENST00000586499 HDAC5Q9UQL6 1122 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms