RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 USP48Q86UV5 1035 aa23.6■■□□□ 1.37
ATG4D-203ENST00000585752 COA1Q9GZY4 146 aa23.6■■□□□ 1.37
ATG4D-203ENST00000585752 CST9Q5W186 159 aa23.59■■□□□ 1.37
ATG4D-203ENST00000585752 LMBR1LQ6UX01 489 aa23.59■■□□□ 1.37
ATG4D-203ENST00000585752 BEGAINQ9BUH8 593 aa23.59■■□□□ 1.37
ATG4D-203ENST00000585752 TLL2Q9Y6L7 1015 aa23.59■■□□□ 1.37
ATG4D-203ENST00000585752 USP17L8P0C7I0 530 aa23.58■■□□□ 1.37
ATG4D-203ENST00000585752 MAP2K1Q02750 393 aaPredicted RBP23.58■■□□□ 1.37
ATG4D-203ENST00000585752 CHRNDQ07001 517 aa23.58■■□□□ 1.37
ATG4D-203ENST00000585752 KRT26Q7Z3Y9 468 aa23.58■■□□□ 1.37
ATG4D-203ENST00000585752 SMC4Q9NTJ3 1288 aa23.58■■□□□ 1.37
ATG4D-203ENST00000585752 FOXO4P98177 505 aa23.57■■□□□ 1.36
ATG4D-203ENST00000585752 ALDH1L2Q3SY69 923 aa23.57■■□□□ 1.36
ATG4D-203ENST00000585752 COL13A1Q5TAT6 717 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-203ENST00000585752 SULF1Q8IWU6 871 aa23.57■■□□□ 1.36
ATG4D-203ENST00000585752 OGFOD1Q8N543 542 aa23.57■■□□□ 1.36
ATG4D-203ENST00000585752 CAPNS2Q96L46 248 aa23.57■■□□□ 1.36
ATG4D-203ENST00000585752 YTHDC1Q96MU7 727 aaKnown RBP23.57■■□□□ 1.36
ATG4D-203ENST00000585752 CNNM1Q9NRU3 951 aa23.57■■□□□ 1.36
ATG4D-203ENST00000585752 PTPRCP08575 1304 aa23.57■■□□□ 1.36
ATG4D-203ENST00000585752 MYO3BQ8WXR4 1341 aa23.57■■□□□ 1.36
ATG4D-203ENST00000585752 CYP4F22Q6NT55 531 aa23.56■■□□□ 1.36
ATG4D-203ENST00000585752 MRPL50Q8N5N7 158 aaKnown RBP23.56■■□□□ 1.36
ATG4D-203ENST00000585752 LDHAL6AQ6ZMR3 332 aa23.55■■□□□ 1.36
ATG4D-203ENST00000585752 TNS4Q8IZW8 715 aa23.55■■□□□ 1.36
ATG4D-203ENST00000585752 SSH1Q8WYL5 1049 aa23.55■■□□□ 1.36
ATG4D-203ENST00000585752 PLIN1O60240 522 aa23.54■■□□□ 1.36
ATG4D-203ENST00000585752 EGFRP00533 1210 aa23.54■■□□□ 1.36
ATG4D-203ENST00000585752 CTCFP49711 727 aaPredicted RBP23.54■■□□□ 1.36
ATG4D-203ENST00000585752 TTLL5Q6EMB2 1281 aa23.54■■□□□ 1.36
ATG4D-203ENST00000585752 C2orf69Q8N8R5 385 aa23.54■■□□□ 1.36
ATG4D-203ENST00000585752 MYOZ2Q9NPC6 264 aa23.54■■□□□ 1.36
ATG4D-203ENST00000585752 WTIPA6NIX2 430 aaPredicted RBP23.53■■□□□ 1.36
ATG4D-203ENST00000585752 TAF5LO75529 589 aa23.53■■□□□ 1.36
ATG4D-203ENST00000585752 SCARF1Q14162 830 aa23.53■■□□□ 1.36
ATG4D-203ENST00000585752 STRIP1Q5VSL9 837 aa23.53■■□□□ 1.36
ATG4D-203ENST00000585752 SAPCD2Q86UD0 394 aa23.53■■□□□ 1.36
ATG4D-203ENST00000585752 GGA3Q9NZ52 723 aa23.53■■□□□ 1.36
ATG4D-203ENST00000585752 HDAC9Q9UKV0 1011 aa23.53■■□□□ 1.36
ATG4D-203ENST00000585752 FOXN1O15353 648 aa23.52■■□□□ 1.36
ATG4D-203ENST00000585752 ZNF280AP59817 542 aaPredicted RBP23.52■■□□□ 1.36
ATG4D-203ENST00000585752 HELBQ8NG08 1087 aaPredicted RBP23.52■■□□□ 1.36
ATG4D-203ENST00000585752 ZNF609O15014 1411 aa23.51■■□□□ 1.35
ATG4D-203ENST00000585752 A0A1B0GUL6 1792 aa23.51■■□□□ 1.35
ATG4D-203ENST00000585752 MMP14P50281 582 aa23.51■■□□□ 1.35
ATG4D-203ENST00000585752 ANGEL2Q5VTE6 544 aaKnown RBP23.51■■□□□ 1.35
ATG4D-203ENST00000585752 ZNF804AQ7Z570 1209 aa23.51■■□□□ 1.35
ATG4D-203ENST00000585752 ZNF594Q96JF6 807 aaPredicted RBP23.51■■□□□ 1.35
ATG4D-203ENST00000585752 HHIPL1Q96JK4 782 aa23.51■■□□□ 1.35
ATG4D-203ENST00000585752 PCNTO95613 3336 aa23.5■■□□□ 1.35
ATG4D-203ENST00000585752 ADM5C9JUS6 153 aa23.5■■□□□ 1.35
ATG4D-203ENST00000585752 HUNKP57058 714 aa23.5■■□□□ 1.35
ATG4D-203ENST00000585752 GTF2IP78347 998 aa23.5■■□□□ 1.35
ATG4D-203ENST00000585752 EPHA10Q5JZY3 1008 aa23.5■■□□□ 1.35
ATG4D-203ENST00000585752 DACT2Q5SW24 774 aa23.5■■□□□ 1.35
ATG4D-203ENST00000585752 TXNRD3Q86VQ6 643 aa23.5■■□□□ 1.35
ATG4D-203ENST00000585752 GBA2Q9HCG7 927 aaPredicted RBP23.5■■□□□ 1.35
ATG4D-203ENST00000585752 WBP1LQ9NX94 342 aa23.5■■□□□ 1.35
ATG4D-203ENST00000585752 MAP2K2P36507 400 aa23.49■■□□□ 1.35
ATG4D-203ENST00000585752 SUCLG2Q96I99 432 aa23.49■■□□□ 1.35
ATG4D-203ENST00000585752 GMLQ99445 158 aa23.49■■□□□ 1.35
ATG4D-203ENST00000585752 CD209Q9NNX6 404 aa23.49■■□□□ 1.35
ATG4D-203ENST00000585752 NBPF7P0C2Y1 421 aaPredicted RBP23.48■■□□□ 1.35
ATG4D-203ENST00000585752 RARSP54136 660 aaKnown RBP23.48■■□□□ 1.35
ATG4D-203ENST00000585752 KLRK1P26718 216 aa23.47■■□□□ 1.35
ATG4D-203ENST00000585752 MXD3Q9BW11 206 aa23.47■■□□□ 1.35
ATG4D-203ENST00000585752 KIF16BQ96L93 1317 aa23.47■■□□□ 1.35
ATG4D-203ENST00000585752 DLK2Q6UY11 383 aa23.46■■□□□ 1.35
ATG4D-203ENST00000585752 PITPNM2Q9BZ72 1349 aa23.46■■□□□ 1.35
ATG4D-203ENST00000585752 PRDM10Q9NQV6 1147 aa23.46■■□□□ 1.35
ATG4D-203ENST00000585752 AOC2O75106 756 aa23.45■■□□□ 1.34
ATG4D-203ENST00000585752 LBX1P52954 281 aa23.45■■□□□ 1.34
ATG4D-203ENST00000585752 C15orf52Q6ZUT6 534 aaKnown RBP23.45■■□□□ 1.34
ATG4D-203ENST00000585752 KIAA0825Q8IV33 1275 aa23.45■■□□□ 1.34
ATG4D-203ENST00000585752 CDCA5Q96FF9 252 aa23.45■■□□□ 1.34
ATG4D-203ENST00000585752 BICC1Q9H694 974 aaKnown RBP23.45■■□□□ 1.34
ATG4D-203ENST00000585752 UTYO14607 1347 aa23.44■■□□□ 1.34
ATG4D-203ENST00000585752 ASTN2O75129 1339 aaPredicted RBP23.44■■□□□ 1.34
ATG4D-203ENST00000585752 SNAP23O00161 211 aa23.44■■□□□ 1.34
ATG4D-203ENST00000585752 NF2P35240 595 aa23.44■■□□□ 1.34
ATG4D-203ENST00000585752 RGMBQ6NW40 437 aa23.44■■□□□ 1.34
ATG4D-203ENST00000585752 MROH5Q6ZUA9 1318 aa23.43■■□□□ 1.34
ATG4D-203ENST00000585752 IPO8O15397 1037 aaKnown RBP23.43■■□□□ 1.34
ATG4D-203ENST00000585752 NOGQ13253 232 aa23.43■■□□□ 1.34
ATG4D-203ENST00000585752 UBE4AQ14139 1066 aa23.43■■□□□ 1.34
ATG4D-203ENST00000585752 CCDC102AQ96A19 550 aa23.43■■□□□ 1.34
ATG4D-203ENST00000585752 API5Q9BZZ5 524 aaKnown RBP23.43■■□□□ 1.34
ATG4D-203ENST00000585752 NOB1Q9ULX3 412 aaKnown RBP23.43■■□□□ 1.34
ATG4D-203ENST00000585752 ZNF646O15015 1829 aaPredicted RBP23.43■■□□□ 1.34
ATG4D-203ENST00000585752 THSD7BQ9C0I4 1608 aa23.42■■□□□ 1.34
ATG4D-203ENST00000585752 CAPN15O75808 1086 aa23.42■■□□□ 1.34
ATG4D-203ENST00000585752 ZNF157P51786 506 aaPredicted RBP23.42■■□□□ 1.34
ATG4D-203ENST00000585752 BRPF1P55201 1214 aaPredicted RBP23.42■■□□□ 1.34
ATG4D-203ENST00000585752 NBPF9Q3BBW0 867 aa23.42■■□□□ 1.34
ATG4D-203ENST00000585752 VPS37DQ86XT2 251 aa23.42■■□□□ 1.34
ATG4D-203ENST00000585752 FRAT1Q92837 279 aaPredicted RBP23.42■■□□□ 1.34
ATG4D-203ENST00000585752 HDAC5Q9UQL6 1122 aa23.42■■□□□ 1.34
ATG4D-203ENST00000585752 WNT10BO00744 389 aa23.41■■□□□ 1.34
ATG4D-203ENST00000585752 TTLL12Q14166 644 aaPredicted RBP23.41■■□□□ 1.34
ATG4D-203ENST00000585752 DLGAP5Q15398 846 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms