RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 KIF4AO95239 1232 aa7.17□□□□□ -1.26
PPP4R1-227ENST00000583988 CES1P23141 567 aa7.17□□□□□ -1.26
PPP4R1-227ENST00000583988 NOS3P29474 1203 aa7.17□□□□□ -1.26
PPP4R1-227ENST00000583988 ARHGAP4P98171 946 aa7.17□□□□□ -1.26
PPP4R1-227ENST00000583988 SETDB1Q15047 1291 aa7.17□□□□□ -1.26
PPP4R1-227ENST00000583988 GLYCTKQ8IVS8 523 aa7.17□□□□□ -1.26
PPP4R1-227ENST00000583988 TUT1Q9H6E5 874 aaKnown RBP7.17□□□□□ -1.26
PPP4R1-227ENST00000583988 FZD6O60353 706 aa7.16□□□□□ -1.26
PPP4R1-227ENST00000583988 ALX3O95076 343 aa7.16□□□□□ -1.26
PPP4R1-227ENST00000583988 CACTIN-AS1Q8N1I8 211 aa7.16□□□□□ -1.26
PPP4R1-227ENST00000583988 CEP120Q8N960 986 aa7.16□□□□□ -1.26
PPP4R1-227ENST00000583988 PBX4Q9BYU1 374 aa7.16□□□□□ -1.26
PPP4R1-227ENST00000583988 MUC3BQ9H195 1237 aa7.16□□□□□ -1.26
PPP4R1-227ENST00000583988 SH2B1Q9NRF2 756 aaPredicted RBP7.16□□□□□ -1.26
PPP4R1-227ENST00000583988 FAM177BA6PVY3 158 aa7.15□□□□□ -1.26
PPP4R1-227ENST00000583988 ACPPP15309 386 aa7.15□□□□□ -1.26
PPP4R1-227ENST00000583988 CDC27P30260 824 aa7.15□□□□□ -1.26
PPP4R1-227ENST00000583988 XKR5Q6UX68 686 aa7.15□□□□□ -1.26
PPP4R1-227ENST00000583988 ADAMTSL4Q6UY14 1074 aa7.15□□□□□ -1.26
PPP4R1-227ENST00000583988 MAP4K3Q8IVH8 894 aa7.15□□□□□ -1.26
PPP4R1-227ENST00000583988 MRPL18Q9H0U6 180 aaKnown RBP7.15□□□□□ -1.26
PPP4R1-227ENST00000583988 AKTIPQ9H8T0 292 aa7.15□□□□□ -1.26
PPP4R1-227ENST00000583988 SRA1Q9HD15 236 aaKnown RBP7.15□□□□□ -1.26
PPP4R1-227ENST00000583988 PRSS36Q5K4E3 855 aa7.14□□□□□ -1.27
PPP4R1-227ENST00000583988 ZMYM1Q5SVZ6 1142 aa7.14□□□□□ -1.27
PPP4R1-227ENST00000583988 GALNT11Q8NCW6 608 aa7.14□□□□□ -1.27
PPP4R1-227ENST00000583988 MEGF10Q96KG7 1140 aa7.14□□□□□ -1.27
PPP4R1-227ENST00000583988 POP1Q99575 1024 aaKnown RBP7.14□□□□□ -1.27
PPP4R1-227ENST00000583988 SSBP4Q9BWG4 385 aaPredicted RBP7.14□□□□□ -1.27
PPP4R1-227ENST00000583988 CARD10Q9BWT7 1032 aa7.14□□□□□ -1.27
PPP4R1-227ENST00000583988 SALL4Q9UJQ4 1053 aa7.14□□□□□ -1.27
PPP4R1-227ENST00000583988 TRPA1O75762 1119 aa7.13□□□□□ -1.27
PPP4R1-227ENST00000583988 H2AFB1P0C5Y9 115 aa7.13□□□□□ -1.27
PPP4R1-227ENST00000583988 H2AFB2P0C5Z0 115 aa7.13□□□□□ -1.27
PPP4R1-227ENST00000583988 PTPRAP18433 802 aa7.13□□□□□ -1.27
PPP4R1-227ENST00000583988 EPHA1P21709 976 aa7.13□□□□□ -1.27
PPP4R1-227ENST00000583988 USP5P45974 858 aa7.13□□□□□ -1.27
PPP4R1-227ENST00000583988 AGGF1Q8N302 714 aaeCLIP7.13□□□□□ -1.27
PPP4R1-227ENST00000583988 Q8N3U1 123 aa7.13□□□□□ -1.27
PPP4R1-227ENST00000583988 DCAF11Q8TEB1 546 aa7.13□□□□□ -1.27
PPP4R1-227ENST00000583988 CHRDQ9H2X0 955 aa7.13□□□□□ -1.27
PPP4R1-227ENST00000583988 CCDC87Q9NVE4 849 aa7.13□□□□□ -1.27
PPP4R1-227ENST00000583988 F8W735 103 aaPredicted RBP7.12□□□□□ -1.27
PPP4R1-227ENST00000583988 PHACTR2O75167 634 aa7.12□□□□□ -1.27
PPP4R1-227ENST00000583988 TNFRSF21O75509 655 aa7.12□□□□□ -1.27
PPP4R1-227ENST00000583988 FAM117BQ6P1L5 589 aa7.12□□□□□ -1.27
PPP4R1-227ENST00000583988 PMEPA1Q969W9 287 aa7.12□□□□□ -1.27
PPP4R1-227ENST00000583988 HHIPQ96QV1 700 aa7.12□□□□□ -1.27
PPP4R1-227ENST00000583988 CITED4Q96RK1 184 aa7.12□□□□□ -1.27
PPP4R1-227ENST00000583988 FOXD3Q9UJU5 478 aaPredicted RBP7.12□□□□□ -1.27
PPP4R1-227ENST00000583988 PDE2AO00408 941 aaPredicted RBP7.11□□□□□ -1.27
PPP4R1-227ENST00000583988 FSCN2O14926 492 aa7.11□□□□□ -1.27
PPP4R1-227ENST00000583988 EREGO14944 169 aa7.11□□□□□ -1.27
PPP4R1-227ENST00000583988 CD68P34810 354 aaPredicted RBP7.11□□□□□ -1.27
PPP4R1-227ENST00000583988 TRIM26Q12899 539 aaPredicted RBP7.11□□□□□ -1.27
PPP4R1-227ENST00000583988 TMEM130Q8N3G9 435 aa7.11□□□□□ -1.27
PPP4R1-227ENST00000583988 DZANK1Q9NVP4 752 aa7.11□□□□□ -1.27
PPP4R1-227ENST00000583988 BIN2Q9UBW5 565 aaPredicted RBP7.11□□□□□ -1.27
PPP4R1-227ENST00000583988 BRPF3Q9ULD4 1205 aa7.11□□□□□ -1.27
PPP4R1-227ENST00000583988 SCO2A0A1W2PP80 73 aa7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 WISP1O95388 367 aa7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 GLB1P16278 677 aa7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 CABP4P57796 275 aa7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 EHHADHQ08426 723 aa7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 FOXD4L6Q3SYB3 417 aaPredicted RBP7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 XP32Q5T750 250 aa7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 FOXD4L3Q6VB84 417 aaPredicted RBP7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 GJD3Q8N144 294 aa7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 SNX29Q8TEQ0 813 aa7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 OSMRQ99650 979 aa7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 ADAM19Q9H013 955 aa7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 KCNK4Q9NYG8 393 aa7.1□□□□□ -1.27
PPP4R1-227ENST00000583988 NFKBIEO00221 500 aa7.09□□□□□ -1.27
PPP4R1-227ENST00000583988 DDX3YO15523 660 aaKnown RBP7.09□□□□□ -1.27
PPP4R1-227ENST00000583988 NDUFB5O43674 189 aa7.09□□□□□ -1.27
PPP4R1-227ENST00000583988 ACAD11Q709F0 780 aa7.09□□□□□ -1.27
PPP4R1-227ENST00000583988 SND1Q7KZF4 910 aaKnown RBP eCLIP7.09□□□□□ -1.27
PPP4R1-227ENST00000583988 SLC7A3Q8WY07 619 aa7.09□□□□□ -1.27
PPP4R1-227ENST00000583988 ZKSCAN3Q9BRR0 538 aa7.09□□□□□ -1.27
PPP4R1-227ENST00000583988 SEC31BQ9NQW1 1179 aa7.09□□□□□ -1.27
PPP4R1-227ENST00000583988 H3BRJ5 948 aa7.08□□□□□ -1.28
PPP4R1-227ENST00000583988 EDN3P14138 238 aa7.08□□□□□ -1.28
PPP4R1-227ENST00000583988 DUOXA2Q1HG44 320 aa7.08□□□□□ -1.28
PPP4R1-227ENST00000583988 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-227ENST00000583988 DZIP1LQ8IYY4 767 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-227ENST00000583988 KLHL23Q8NBE8 558 aa7.08□□□□□ -1.28
PPP4R1-227ENST00000583988 KLHDC7BQ96G42 594 aa7.08□□□□□ -1.28
PPP4R1-227ENST00000583988 RBCK1Q9BYM8 510 aa7.08□□□□□ -1.28
PPP4R1-227ENST00000583988 GZF1Q9H116 711 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-227ENST00000583988 PDE3BQ13370 1112 aa7.07□□□□□ -1.28
PPP4R1-227ENST00000583988 PRR23CQ6ZRP0 262 aa7.07□□□□□ -1.28
PPP4R1-227ENST00000583988 ASAP3Q8TDY4 903 aa7.07□□□□□ -1.28
PPP4R1-227ENST00000583988 UBASH3BQ8TF42 649 aa7.07□□□□□ -1.28
PPP4R1-227ENST00000583988 LATS2Q9NRM7 1088 aa7.07□□□□□ -1.28
PPP4R1-227ENST00000583988 DCTN4Q9UJW0 460 aa7.07□□□□□ -1.28
PPP4R1-227ENST00000583988 TM4SF5O14894 197 aa7.06□□□□□ -1.28
PPP4R1-227ENST00000583988 ADAM11O75078 769 aa7.06□□□□□ -1.28
PPP4R1-227ENST00000583988 IGHA2P01877 340 aa7.06□□□□□ -1.28
PPP4R1-227ENST00000583988 POLR3DP05423 398 aaPredicted RBP7.06□□□□□ -1.28
PPP4R1-227ENST00000583988 NLRP12P59046 1061 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms