RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 ZNF646O15015 1829 aaPredicted RBP8.45□□□□□ -1.06
NUP85-221ENST00000583548 LAMB2P55268 1798 aa8.44□□□□□ -1.06
NUP85-221ENST00000583548 WNT10BO00744 389 aa8.44□□□□□ -1.06
NUP85-221ENST00000583548 TAF1CQ15572 869 aaPredicted RBP8.44□□□□□ -1.06
NUP85-221ENST00000583548 SYMPKQ92797 1274 aaKnown RBP8.44□□□□□ -1.06
NUP85-221ENST00000583548 GGA1Q9UJY5 639 aa8.44□□□□□ -1.06
NUP85-221ENST00000583548 SCAF8Q9UPN6 1271 aaKnown RBP8.44□□□□□ -1.06
NUP85-221ENST00000583548 PPP2R3BQ9Y5P8 575 aa8.44□□□□□ -1.06
NUP85-221ENST00000583548 UFL1O94874 794 aa8.43□□□□□ -1.06
NUP85-221ENST00000583548 FARP2O94887 1054 aaPredicted RBP8.43□□□□□ -1.06
NUP85-221ENST00000583548 HOXD10P28358 340 aa8.43□□□□□ -1.06
NUP85-221ENST00000583548 IREB2P48200 963 aaKnown RBP8.43□□□□□ -1.06
NUP85-221ENST00000583548 SF3B3Q15393 1217 aaKnown RBP8.43□□□□□ -1.06
NUP85-221ENST00000583548 SUPT20HL1Q3ZLR7 823 aa8.43□□□□□ -1.06
NUP85-221ENST00000583548 MCM10Q7L590 875 aa8.43□□□□□ -1.06
NUP85-221ENST00000583548 NLRP10Q86W26 655 aa8.43□□□□□ -1.06
NUP85-221ENST00000583548 ANKRD13AQ8IZ07 590 aa8.43□□□□□ -1.06
NUP85-221ENST00000583548 HELBQ8NG08 1087 aaPredicted RBP8.43□□□□□ -1.06
NUP85-221ENST00000583548 CELF1Q92879 486 aaKnown RBP8.43□□□□□ -1.06
NUP85-221ENST00000583548 ANKIB1Q9P2G1 1089 aa8.43□□□□□ -1.06
NUP85-221ENST00000583548 STAP2Q9UGK3 403 aa8.43□□□□□ -1.06
NUP85-221ENST00000583548 RPTORQ8N122 1335 aa8.43□□□□□ -1.06
NUP85-221ENST00000583548 CEP290O15078 2479 aa8.43□□□□□ -1.06
NUP85-221ENST00000583548 PRKAR2BP31323 418 aa8.42□□□□□ -1.06
NUP85-221ENST00000583548 PLA2G5P39877 138 aa8.42□□□□□ -1.06
NUP85-221ENST00000583548 RPS8P62241 208 aaKnown RBP8.42□□□□□ -1.06
NUP85-221ENST00000583548 UBXN2AP68543 259 aa8.42□□□□□ -1.06
NUP85-221ENST00000583548 Q7L0L9 218 aa8.42□□□□□ -1.06
NUP85-221ENST00000583548 FAM122AQ96E09 287 aa8.42□□□□□ -1.06
NUP85-221ENST00000583548 GDF15Q99988 308 aa8.42□□□□□ -1.06
NUP85-221ENST00000583548 BRCA2P51587 3418 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 SCN9AQ15858 1988 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 PSME4Q14997 1843 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 HSP90B1P14625 803 aaKnown RBP8.41□□□□□ -1.06
NUP85-221ENST00000583548 GRK4P32298 578 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 EIF4G2P78344 907 aaKnown RBP eCLIP8.41□□□□□ -1.06
NUP85-221ENST00000583548 LACTBP83111 547 aaPredicted RBP8.41□□□□□ -1.06
NUP85-221ENST00000583548 CAP1Q01518 475 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 MTFR1Q15390 333 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 AMER1Q5JTC6 1135 aaPredicted RBP8.41□□□□□ -1.06
NUP85-221ENST00000583548 TDHQ8IZJ6 230 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 CLMNQ96JQ2 1002 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 PHACTR3Q96KR7 559 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 TRIM47Q96LD4 638 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 PTPN18Q99952 460 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 RNF208Q9H0X6 261 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 DEFB129Q9H1M3 183 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 ZCCHC17Q9NP64 241 aaKnown RBP8.41□□□□□ -1.06
NUP85-221ENST00000583548 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.41□□□□□ -1.06
NUP85-221ENST00000583548 CENPFP49454 3210 aa8.41□□□□□ -1.06
NUP85-221ENST00000583548 TAF1P21675 1872 aa8.4□□□□□ -1.06
NUP85-221ENST00000583548 TLR2O60603 784 aa8.4□□□□□ -1.06
NUP85-221ENST00000583548 CCL5P13501 91 aa8.4□□□□□ -1.06
NUP85-221ENST00000583548 GTF2A2P52657 109 aa8.4□□□□□ -1.06
NUP85-221ENST00000583548 STRIP1Q5VSL9 837 aa8.4□□□□□ -1.06
NUP85-221ENST00000583548 FAM109BQ6ICB4 259 aaPredicted RBP8.4□□□□□ -1.06
NUP85-221ENST00000583548 RAET1EQ8TD07 263 aa8.4□□□□□ -1.06
NUP85-221ENST00000583548 U2AF1L4Q8WU68 220 aaKnown RBP8.4□□□□□ -1.06
NUP85-221ENST00000583548 RANBP2P49792 3224 aaKnown RBP8.4□□□□□ -1.07
NUP85-221ENST00000583548 COL3A1P02461 1466 aaPredicted RBP8.39□□□□□ -1.07
NUP85-221ENST00000583548 XDHP47989 1333 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 FAM205AQ6ZU69 1335 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 MYO1BO43795 1136 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 SASH1O94885 1247 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 SGPL1O95470 568 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 ATP2B4P23634 1241 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 BCAMP50895 628 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 EIF4A1P60842 406 aaKnown RBP8.39□□□□□ -1.07
NUP85-221ENST00000583548 MS4A4AQ96JQ5 239 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 RSPH6AQ9H0K4 717 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 BIN2Q9UBW5 565 aaPredicted RBP8.39□□□□□ -1.07
NUP85-221ENST00000583548 SRRDQ9UH36 339 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 NUDCQ9Y266 331 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 RIPOR2Q9Y4F9 1068 aa8.39□□□□□ -1.07
NUP85-221ENST00000583548 CCL15-CCL14A0A0B4J2E2 113 aa8.38□□□□□ -1.07
NUP85-221ENST00000583548 GJA5P36382 358 aa8.38□□□□□ -1.07
NUP85-221ENST00000583548 DCTN1Q14203 1278 aa8.38□□□□□ -1.07
NUP85-221ENST00000583548 CCL15Q16663 113 aa8.38□□□□□ -1.07
NUP85-221ENST00000583548 DACT2Q5SW24 774 aa8.38□□□□□ -1.07
NUP85-221ENST00000583548 OPTNQ96CV9 577 aa8.38□□□□□ -1.07
NUP85-221ENST00000583548 CFAP53Q96M91 514 aa8.38□□□□□ -1.07
NUP85-221ENST00000583548 MED23Q9ULK4 1368 aa8.37□□□□□ -1.07
NUP85-221ENST00000583548 ZNF804BA4D1E1 1349 aa8.37□□□□□ -1.07
NUP85-221ENST00000583548 IRS2Q9Y4H2 1338 aa8.37□□□□□ -1.07
NUP85-221ENST00000583548 NEFMP07197 916 aa8.37□□□□□ -1.07
NUP85-221ENST00000583548 HOXD11P31277 338 aaPredicted RBP8.37□□□□□ -1.07
NUP85-221ENST00000583548 DLGAP5Q15398 846 aa8.37□□□□□ -1.07
NUP85-221ENST00000583548 LRP10Q7Z4F1 713 aa8.37□□□□□ -1.07
NUP85-221ENST00000583548 SLAIN1Q8ND83 568 aa8.37□□□□□ -1.07
NUP85-221ENST00000583548 BRI3BPQ8WY22 251 aa8.37□□□□□ -1.07
NUP85-221ENST00000583548 ZBED3Q96IU2 234 aaPredicted RBP8.37□□□□□ -1.07
NUP85-221ENST00000583548 ARHGAP39Q9C0H5 1083 aa8.37□□□□□ -1.07
NUP85-221ENST00000583548 MIS18AQ9NYP9 233 aa8.37□□□□□ -1.07
NUP85-221ENST00000583548 FZD1Q9UP38 647 aa8.37□□□□□ -1.07
NUP85-221ENST00000583548 SSC5DA1L4H1 1573 aa8.36□□□□□ -1.07
NUP85-221ENST00000583548 MYPNQ86TC9 1320 aa8.36□□□□□ -1.07
NUP85-221ENST00000583548 TNFRSF10AO00220 468 aa8.36□□□□□ -1.07
NUP85-221ENST00000583548 USP2O75604 605 aaPredicted RBP8.36□□□□□ -1.07
NUP85-221ENST00000583548 TFRCP02786 760 aaKnown RBP8.36□□□□□ -1.07
NUP85-221ENST00000583548 CETPP11597 493 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms