RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ATG9AQ7Z3C6 839 aa15.8■□□□□ 0.12
SNORD55-201ENST00000581525 LDHDQ86WU2 507 aa15.8■□□□□ 0.12
SNORD55-201ENST00000581525 HELBQ8NG08 1087 aaPredicted RBP15.8■□□□□ 0.12
SNORD55-201ENST00000581525 ZBTB22O15209 634 aa15.79■□□□□ 0.12
SNORD55-201ENST00000581525 PDE8BO95263 885 aa15.79■□□□□ 0.12
SNORD55-201ENST00000581525 IL1R1P14778 569 aa15.79■□□□□ 0.12
SNORD55-201ENST00000581525 FGFR2P21802 821 aa15.79■□□□□ 0.12
SNORD55-201ENST00000581525 MMP14P50281 582 aa15.79■□□□□ 0.12
SNORD55-201ENST00000581525 AGBL3Q8NEM8 1001 aa15.79■□□□□ 0.12
SNORD55-201ENST00000581525 ADARB2Q9NS39 739 aaKnown RBP15.79■□□□□ 0.12
SNORD55-201ENST00000581525 ADAMTSL1Q8N6G6 1762 aa15.79■□□□□ 0.12
SNORD55-201ENST00000581525 CEP350Q5VT06 3117 aa15.79■□□□□ 0.12
SNORD55-201ENST00000581525 USP17L3A6NCW0 530 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 USP17L4A6NCW7 530 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 POTEIP0CG38 1075 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 POTEJP0CG39 1038 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 HSPA6P17066 643 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 KLRK1P26718 216 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 LMOD1P29536 600 aaPredicted RBP15.78■□□□□ 0.12
SNORD55-201ENST00000581525 STRIP1Q5VSL9 837 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 CHADLQ6NUI6 762 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 RSBN1LQ6PCB5 846 aaPredicted RBP15.78■□□□□ 0.12
SNORD55-201ENST00000581525 USP17L1Q7RTZ2 530 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 KLHDC4Q8TBB5 520 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 CD209Q9NNX6 404 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 CNOT7Q9UIV1 285 aaKnown RBP15.78■□□□□ 0.12
SNORD55-201ENST00000581525 SPEF2Q9C093 1822 aa15.78■□□□□ 0.12
SNORD55-201ENST00000581525 SCN9AQ15858 1988 aa15.77■□□□□ 0.12
SNORD55-201ENST00000581525 ZNF280AP59817 542 aaPredicted RBP15.77■□□□□ 0.12
SNORD55-201ENST00000581525 DACT2Q5SW24 774 aa15.77■□□□□ 0.12
SNORD55-201ENST00000581525 FBXO33Q7Z6M2 555 aa15.77■□□□□ 0.12
SNORD55-201ENST00000581525 FTSJ3Q8IY81 847 aaKnown RBP15.77■□□□□ 0.12
SNORD55-201ENST00000581525 ZC3H15Q8WU90 426 aaKnown RBP15.77■□□□□ 0.12
SNORD55-201ENST00000581525 FAM84BQ96KN1 310 aaPredicted RBP15.77■□□□□ 0.12
SNORD55-201ENST00000581525 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
SNORD55-201ENST00000581525 G3V3G9 751 aa15.76■□□□□ 0.11
SNORD55-201ENST00000581525 ITGBL1O95965 494 aaPredicted RBP15.76■□□□□ 0.11
SNORD55-201ENST00000581525 KCNJ4P48050 445 aa15.76■□□□□ 0.11
SNORD55-201ENST00000581525 FKBP1AP62942 108 aaKnown RBP15.76■□□□□ 0.11
SNORD55-201ENST00000581525 ATP8B2P98198 1209 aa15.76■□□□□ 0.11
SNORD55-201ENST00000581525 POLA2Q14181 598 aa15.76■□□□□ 0.11
SNORD55-201ENST00000581525 PDE3AQ14432 1141 aa15.76■□□□□ 0.11
SNORD55-201ENST00000581525 DCAF8Q5TAQ9 597 aa15.76■□□□□ 0.11
SNORD55-201ENST00000581525 TDRD7Q8NHU6 1098 aaKnown RBP15.76■□□□□ 0.11
SNORD55-201ENST00000581525 A0A1B0GUL6 1792 aa15.76■□□□□ 0.11
SNORD55-201ENST00000581525 IL15P40933 162 aaPredicted RBP15.75■□□□□ 0.11
SNORD55-201ENST00000581525 HIRAP54198 1017 aaPredicted RBP15.75■□□□□ 0.11
SNORD55-201ENST00000581525 METTL24Q5JXM2 366 aa15.75■□□□□ 0.11
SNORD55-201ENST00000581525 PANK1Q8TE04 598 aa15.75■□□□□ 0.11
SNORD55-201ENST00000581525 SSH3Q8TE77 659 aa15.75■□□□□ 0.11
SNORD55-201ENST00000581525 PSME4Q14997 1843 aa15.75■□□□□ 0.11
SNORD55-201ENST00000581525 MYO3BQ8WXR4 1341 aa15.74■□□□□ 0.11
SNORD55-201ENST00000581525 PASKQ96RG2 1323 aa15.74■□□□□ 0.11
SNORD55-201ENST00000581525 H7C1D1 291 aa15.74■□□□□ 0.11
SNORD55-201ENST00000581525 SRGAP3O43295 1099 aa15.74■□□□□ 0.11
SNORD55-201ENST00000581525 PLIN1O60240 522 aa15.74■□□□□ 0.11
SNORD55-201ENST00000581525 SASH1O94885 1247 aa15.74■□□□□ 0.11
SNORD55-201ENST00000581525 TTLL5Q6EMB2 1281 aa15.74■□□□□ 0.11
SNORD55-201ENST00000581525 ZNF804AQ7Z570 1209 aa15.74■□□□□ 0.11
SNORD55-201ENST00000581525 FAM205AQ6ZU69 1335 aa15.73■□□□□ 0.11
SNORD55-201ENST00000581525 PNMA6EA0A0J9YXQ4 647 aa15.73■□□□□ 0.11
SNORD55-201ENST00000581525 HIBADHP31937 336 aaKnown RBP15.73■□□□□ 0.11
SNORD55-201ENST00000581525 MVPQ14764 893 aaKnown RBP15.73■□□□□ 0.11
SNORD55-201ENST00000581525 PUM3Q15397 648 aaKnown RBP15.73■□□□□ 0.11
SNORD55-201ENST00000581525 ITPRIPQ8IWB1 547 aa15.73■□□□□ 0.11
SNORD55-201ENST00000581525 MICALL2Q8IY33 904 aa15.73■□□□□ 0.11
SNORD55-201ENST00000581525 LPIN2Q92539 896 aa15.73■□□□□ 0.11
SNORD55-201ENST00000581525 PA2G4Q9UQ80 394 aaKnown RBP15.73■□□□□ 0.11
SNORD55-201ENST00000581525 ZNF646O15015 1829 aaPredicted RBP15.73■□□□□ 0.11
SNORD55-201ENST00000581525 SHTN1A0MZ66 631 aa15.72■□□□□ 0.11
SNORD55-201ENST00000581525 APLP1P51693 650 aa15.72■□□□□ 0.11
SNORD55-201ENST00000581525 CNTROBQ8N137 903 aa15.72■□□□□ 0.11
SNORD55-201ENST00000581525 ZBTB40Q9NUA8 1239 aa15.72■□□□□ 0.11
SNORD55-201ENST00000581525 CEP126Q9P2H0 1117 aa15.72■□□□□ 0.11
SNORD55-201ENST00000581525 DDX19BQ9UMR2 479 aa15.72■□□□□ 0.11
SNORD55-201ENST00000581525 NOP58Q9Y2X3 529 aaKnown RBP15.72■□□□□ 0.11
SNORD55-201ENST00000581525 USP17L8P0C7I0 530 aa15.71■□□□□ 0.11
SNORD55-201ENST00000581525 GTF2IP78347 998 aa15.71■□□□□ 0.11
SNORD55-201ENST00000581525 EAPPQ56P03 285 aaPredicted RBP15.71■□□□□ 0.11
SNORD55-201ENST00000581525 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
SNORD55-201ENST00000581525 TRPM4Q8TD43 1214 aa15.71■□□□□ 0.11
SNORD55-201ENST00000581525 IFIT1P09914 478 aaKnown RBP15.7■□□□□ 0.1
SNORD55-201ENST00000581525 GYG1P46976 350 aa15.7■□□□□ 0.1
SNORD55-201ENST00000581525 SAMD7Q7Z3H4 446 aa15.7■□□□□ 0.1
SNORD55-201ENST00000581525 DNAJC5GQ8N7S2 189 aa15.7■□□□□ 0.1
SNORD55-201ENST00000581525 ZBED3Q96IU2 234 aaPredicted RBP15.7■□□□□ 0.1
SNORD55-201ENST00000581525 SIL1Q9H173 461 aa15.7■□□□□ 0.1
SNORD55-201ENST00000581525 CHMP4BQ9H444 224 aaKnown RBP15.7■□□□□ 0.1
SNORD55-201ENST00000581525 EGFRP00533 1210 aa15.69■□□□□ 0.1
SNORD55-201ENST00000581525 CAVIN4Q5BKX8 364 aa15.69■□□□□ 0.1
SNORD55-201ENST00000581525 CEP85Q6P2H3 762 aa15.69■□□□□ 0.1
SNORD55-201ENST00000581525 CERS5Q8N5B7 392 aa15.69■□□□□ 0.1
SNORD55-201ENST00000581525 MTMR14Q8NCE2 650 aa15.69■□□□□ 0.1
SNORD55-201ENST00000581525 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
SNORD55-201ENST00000581525 SLC5A1P13866 664 aa15.68■□□□□ 0.1
SNORD55-201ENST00000581525 BCAMP50895 628 aa15.68■□□□□ 0.1
SNORD55-201ENST00000581525 C20orf194Q5TEA3 1177 aa15.68■□□□□ 0.1
SNORD55-201ENST00000581525 MAP1SQ66K74 1059 aaPredicted RBP15.68■□□□□ 0.1
SNORD55-201ENST00000581525 RPAP2Q8IXW5 612 aaPredicted RBP15.68■□□□□ 0.1
SNORD55-201ENST00000581525 MXD3Q9BW11 206 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms