RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CASC1Q6TDU7 716 aa16.82■□□□□ 0.28
CDK5RAP3-219ENST00000580670 CNKSR1Q969H4 720 aa16.82■□□□□ 0.28
CDK5RAP3-219ENST00000580670 ZNF512BQ96KM6 892 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-219ENST00000580670 NSFL1CQ9UNZ2 370 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-219ENST00000580670 UQCRFS1P1P0C7P4 283 aa16.82■□□□□ 0.28
CDK5RAP3-219ENST00000580670 ARID4AP29374 1257 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-219ENST00000580670 EDC3Q96F86 508 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-219ENST00000580670 LRRC37AA6NMS7 1700 aa16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 SEC24BO95487 1268 aa16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 FKBP4Q02790 459 aaKnown RBP eCLIP16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 SCARF1Q14162 830 aa16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 CAVIN4Q5BKX8 364 aa16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 PRPF40BQ6NWY9 871 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 SGIP1Q9BQI5 828 aa16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 TMX4Q9H1E5 349 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 SNRKQ9NRH2 765 aa16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 PAG1Q9NWQ8 432 aa16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 CACNA1SQ13698 1873 aa16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 KIF13BQ9NQT8 1826 aa16.81■□□□□ 0.28
CDK5RAP3-219ENST00000580670 GOLIM4O00461 696 aa16.8■□□□□ 0.28
CDK5RAP3-219ENST00000580670 UFL1O94874 794 aa16.8■□□□□ 0.28
CDK5RAP3-219ENST00000580670 ATP2B4P23634 1241 aa16.8■□□□□ 0.28
CDK5RAP3-219ENST00000580670 KLRK1P26718 216 aa16.8■□□□□ 0.28
CDK5RAP3-219ENST00000580670 MCAMP43121 646 aa16.8■□□□□ 0.28
CDK5RAP3-219ENST00000580670 GYG1P46976 350 aa16.8■□□□□ 0.28
CDK5RAP3-219ENST00000580670 FSD1Q9BTV5 496 aa16.8■□□□□ 0.28
CDK5RAP3-219ENST00000580670 PODXL2Q9NZ53 605 aa16.8■□□□□ 0.28
CDK5RAP3-219ENST00000580670 GGA1Q9UJY5 639 aa16.8■□□□□ 0.28
CDK5RAP3-219ENST00000580670 A0A0G2JLW4 131 aa16.79■□□□□ 0.28
CDK5RAP3-219ENST00000580670 DPEP1P16444 411 aa16.79■□□□□ 0.28
CDK5RAP3-219ENST00000580670 CHMLP26374 656 aa16.79■□□□□ 0.28
CDK5RAP3-219ENST00000580670 PTGER2P43116 358 aa16.79■□□□□ 0.28
CDK5RAP3-219ENST00000580670 VPS37DQ86XT2 251 aa16.79■□□□□ 0.28
CDK5RAP3-219ENST00000580670 ZAP70P43403 619 aa16.79■□□□□ 0.28
CDK5RAP3-219ENST00000580670 OLFM4Q6UX06 510 aa16.79■□□□□ 0.28
CDK5RAP3-219ENST00000580670 PI16Q6UXB8 463 aa16.79■□□□□ 0.28
CDK5RAP3-219ENST00000580670 FAM84BQ96KN1 310 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-219ENST00000580670 GNL3LQ9NVN8 582 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-219ENST00000580670 SLX4Q8IY92 1834 aa16.79■□□□□ 0.28
CDK5RAP3-219ENST00000580670 DLEC1Q9Y238 1755 aa16.78■□□□□ 0.28
CDK5RAP3-219ENST00000580670 TGFB2P61812 414 aa16.78■□□□□ 0.28
CDK5RAP3-219ENST00000580670 RASGRF1Q13972 1273 aa16.78■□□□□ 0.28
CDK5RAP3-219ENST00000580670 FBXO33Q7Z6M2 555 aa16.78■□□□□ 0.28
CDK5RAP3-219ENST00000580670 PPP1R1BQ9UD71 204 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-219ENST00000580670 IRS2Q9Y4H2 1338 aa16.78■□□□□ 0.28
CDK5RAP3-219ENST00000580670 AKAP11Q9UKA4 1901 aa16.78■□□□□ 0.28
CDK5RAP3-219ENST00000580670 HIBADHP31937 336 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP3-219ENST00000580670 MFAP1P55081 439 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP3-219ENST00000580670 MPNDQ8N594 471 aa16.77■□□□□ 0.28
CDK5RAP3-219ENST00000580670 KBTBD3Q8NAB2 608 aa16.77■□□□□ 0.28
CDK5RAP3-219ENST00000580670 TBC1D16Q8TBP0 767 aa16.77■□□□□ 0.28
CDK5RAP3-219ENST00000580670 GPR101Q96P66 508 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-219ENST00000580670 ANTXR1Q9H6X2 564 aa16.77■□□□□ 0.28
CDK5RAP3-219ENST00000580670 DIAPH3Q9NSV4 1193 aa16.77■□□□□ 0.28
CDK5RAP3-219ENST00000580670 HMG20BQ9P0W2 317 aa16.77■□□□□ 0.28
CDK5RAP3-219ENST00000580670 ZNF219Q9P2Y4 722 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-219ENST00000580670 POLLQ9UGP5 575 aa16.77■□□□□ 0.28
CDK5RAP3-219ENST00000580670 LTBP1Q14766 1721 aa16.77■□□□□ 0.27
CDK5RAP3-219ENST00000580670 C6orf229H3BNL8 230 aa16.77■□□□□ 0.27
CDK5RAP3-219ENST00000580670 KCNA3P22001 575 aa16.77■□□□□ 0.27
CDK5RAP3-219ENST00000580670 C15orf52Q6ZUT6 534 aaKnown RBP16.77■□□□□ 0.27
CDK5RAP3-219ENST00000580670 TXNRD3Q86VQ6 643 aa16.77■□□□□ 0.27
CDK5RAP3-219ENST00000580670 KLHL34Q8N239 644 aa16.77■□□□□ 0.27
CDK5RAP3-219ENST00000580670 TTLL6Q8N841 843 aa16.77■□□□□ 0.27
CDK5RAP3-219ENST00000580670 SPATA5Q8NB90 893 aa16.77■□□□□ 0.27
CDK5RAP3-219ENST00000580670 IQSEC3Q9UPP2 1182 aaPredicted RBP16.77■□□□□ 0.27
CDK5RAP3-219ENST00000580670 HIP1O00291 1037 aa16.76■□□□□ 0.27
CDK5RAP3-219ENST00000580670 DPP8Q6V1X1 898 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-219ENST00000580670 SPON1Q9HCB6 807 aa16.76■□□□□ 0.27
CDK5RAP3-219ENST00000580670 EIF5BO60841 1220 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-219ENST00000580670 ESYT1Q9BSJ8 1104 aa16.75■□□□□ 0.27
CDK5RAP3-219ENST00000580670 UPF2Q9HAU5 1272 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-219ENST00000580670 CD2APQ9Y5K6 639 aa16.75■□□□□ 0.27
CDK5RAP3-219ENST00000580670 RFX7Q2KHR2 1363 aa16.75■□□□□ 0.27
CDK5RAP3-219ENST00000580670 CYP2E1P05181 493 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-219ENST00000580670 TTF1Q15361 905 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-219ENST00000580670 CWC27Q6UX04 472 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-219ENST00000580670 ZNF804AQ7Z570 1209 aa16.74■□□□□ 0.27
CDK5RAP3-219ENST00000580670 C7orf43Q8WVR3 580 aa16.74■□□□□ 0.27
CDK5RAP3-219ENST00000580670 KIAA1551Q9HCM1 1747 aa16.74■□□□□ 0.27
CDK5RAP3-219ENST00000580670 SEMA3EO15041 775 aa16.74■□□□□ 0.27
CDK5RAP3-219ENST00000580670 FRAT2O75474 233 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-219ENST00000580670 RUFY2Q8WXA3 655 aa16.74■□□□□ 0.27
CDK5RAP3-219ENST00000580670 PIM2Q9P1W9 311 aa16.74■□□□□ 0.27
CDK5RAP3-219ENST00000580670 DENND2AQ9ULE3 1009 aa16.74■□□□□ 0.27
CDK5RAP3-219ENST00000580670 MED23Q9ULK4 1368 aa16.73■□□□□ 0.27
CDK5RAP3-219ENST00000580670 C21orf2O43822 256 aa16.73■□□□□ 0.27
CDK5RAP3-219ENST00000580670 NMIQ13287 307 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-219ENST00000580670 CC2D2BQ6DHV5 1058 aa16.73■□□□□ 0.27
CDK5RAP3-219ENST00000580670 PIH1D3Q9NQM4 214 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-219ENST00000580670 DUOX1Q9NRD9 1551 aa16.73■□□□□ 0.27
CDK5RAP3-219ENST00000580670 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-219ENST00000580670 TICAM2Q86XR7 235 aa16.72■□□□□ 0.27
CDK5RAP3-219ENST00000580670 FAM227BQ96M60 508 aa16.72■□□□□ 0.27
CDK5RAP3-219ENST00000580670 RIMBP2O15034 1052 aa16.72■□□□□ 0.27
CDK5RAP3-219ENST00000580670 SGSM2O43147 1006 aa16.72■□□□□ 0.27
CDK5RAP3-219ENST00000580670 REC8O95072 547 aa16.72■□□□□ 0.27
CDK5RAP3-219ENST00000580670 DEKP35659 375 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-219ENST00000580670 IPO9Q96P70 1041 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-219ENST00000580670 EYA3Q99504 573 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms