RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 DPF2Q92785 391 aa12.37□□□□□ -0.43
GGA3-209ENST00000580646 MEIS3Q99687 375 aa12.37□□□□□ -0.43
GGA3-209ENST00000580646 H7C1D1 291 aa12.36□□□□□ -0.43
GGA3-209ENST00000580646 PLIN1O60240 522 aa12.36□□□□□ -0.43
GGA3-209ENST00000580646 MTX1Q13505 466 aa12.36□□□□□ -0.43
GGA3-209ENST00000580646 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
GGA3-209ENST00000580646 ANKRD44Q8N8A2 993 aa12.36□□□□□ -0.43
GGA3-209ENST00000580646 PANK1Q8TE04 598 aa12.36□□□□□ -0.43
GGA3-209ENST00000580646 MPHOSPH8Q99549 860 aa12.36□□□□□ -0.43
GGA3-209ENST00000580646 BICC1Q9H694 974 aaKnown RBP12.36□□□□□ -0.43
GGA3-209ENST00000580646 ADAMTSL1Q8N6G6 1762 aa12.35□□□□□ -0.43
GGA3-209ENST00000580646 SHTN1A0MZ66 631 aa12.35□□□□□ -0.43
GGA3-209ENST00000580646 ANKRD18BA2A2Z9 1011 aa12.35□□□□□ -0.43
GGA3-209ENST00000580646 WTIPA6NIX2 430 aaPredicted RBP12.35□□□□□ -0.43
GGA3-209ENST00000580646 GNAI2P04899 355 aa12.35□□□□□ -0.43
GGA3-209ENST00000580646 VIL1P09327 827 aaKnown RBP12.35□□□□□ -0.43
GGA3-209ENST00000580646 PRKCSHP14314 528 aaPredicted RBP12.35□□□□□ -0.43
GGA3-209ENST00000580646 RPS12P25398 132 aaKnown RBP12.35□□□□□ -0.43
GGA3-209ENST00000580646 HIRAP54198 1017 aaPredicted RBP12.35□□□□□ -0.43
GGA3-209ENST00000580646 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
GGA3-209ENST00000580646 MICALL2Q8IY33 904 aa12.35□□□□□ -0.43
GGA3-209ENST00000580646 TRPM4Q8TD43 1214 aa12.35□□□□□ -0.43
GGA3-209ENST00000580646 ZC3H15Q8WU90 426 aaKnown RBP12.35□□□□□ -0.43
GGA3-209ENST00000580646 MKRN1Q9UHC7 482 aaKnown RBP12.35□□□□□ -0.43
GGA3-209ENST00000580646 PGAP2Q9UHJ9 254 aa12.35□□□□□ -0.43
GGA3-209ENST00000580646 FMR1Q06787 632 aaKnown RBP eCLIP12.34□□□□□ -0.43
GGA3-209ENST00000580646 CCDC57Q2TAC2 916 aa12.34□□□□□ -0.43
GGA3-209ENST00000580646 PODNQ7Z5L7 613 aa12.34□□□□□ -0.43
GGA3-209ENST00000580646 ANKRD2Q9GZV1 360 aa12.34□□□□□ -0.43
GGA3-209ENST00000580646 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
GGA3-209ENST00000580646 LEMD3Q9Y2U8 911 aa12.34□□□□□ -0.43
GGA3-209ENST00000580646 CHMP3Q9Y3E7 222 aa12.34□□□□□ -0.43
GGA3-209ENST00000580646 LRRFIP2Q9Y608 721 aaKnown RBP12.34□□□□□ -0.43
GGA3-209ENST00000580646 TRAF5O00463 557 aa12.33□□□□□ -0.44
GGA3-209ENST00000580646 SAMD7Q7Z3H4 446 aa12.33□□□□□ -0.44
GGA3-209ENST00000580646 ZBTB40Q9NUA8 1239 aa12.33□□□□□ -0.44
GGA3-209ENST00000580646 PCDH10Q9P2E7 1040 aa12.33□□□□□ -0.44
GGA3-209ENST00000580646 COG6Q9Y2V7 657 aa12.33□□□□□ -0.44
GGA3-209ENST00000580646 CNTNAP1P78357 1384 aa12.32□□□□□ -0.44
GGA3-209ENST00000580646 MED23Q9ULK4 1368 aa12.32□□□□□ -0.44
GGA3-209ENST00000580646 CHRNDQ07001 517 aa12.32□□□□□ -0.44
GGA3-209ENST00000580646 TBC1D10BQ4KMP7 808 aaPredicted RBP12.32□□□□□ -0.44
GGA3-209ENST00000580646 RBM26Q5T8P6 1007 aaKnown RBP12.32□□□□□ -0.44
GGA3-209ENST00000580646 C20orf194Q5TEA3 1177 aa12.32□□□□□ -0.44
GGA3-209ENST00000580646 RSBN1LQ6PCB5 846 aaPredicted RBP12.32□□□□□ -0.44
GGA3-209ENST00000580646 GLIS2Q9BZE0 524 aaPredicted RBP12.32□□□□□ -0.44
GGA3-209ENST00000580646 ZNF804BA4D1E1 1349 aa12.32□□□□□ -0.44
GGA3-209ENST00000580646 USP17L3A6NCW0 530 aa12.31□□□□□ -0.44
GGA3-209ENST00000580646 USP17L4A6NCW7 530 aa12.31□□□□□ -0.44
GGA3-209ENST00000580646 RASSF10A6NK89 507 aa12.31□□□□□ -0.44
GGA3-209ENST00000580646 RFX5P48382 616 aaPredicted RBP12.31□□□□□ -0.44
GGA3-209ENST00000580646 AAMPQ13685 434 aa12.31□□□□□ -0.44
GGA3-209ENST00000580646 DEFB115Q30KQ5 88 aa12.31□□□□□ -0.44
GGA3-209ENST00000580646 CST9Q5W186 159 aa12.31□□□□□ -0.44
GGA3-209ENST00000580646 CDC37L1Q7L3B6 337 aa12.31□□□□□ -0.44
GGA3-209ENST00000580646 USP17L1Q7RTZ2 530 aa12.31□□□□□ -0.44
GGA3-209ENST00000580646 TXNRD3Q86VQ6 643 aa12.31□□□□□ -0.44
GGA3-209ENST00000580646 AGBL3Q8NEM8 1001 aa12.31□□□□□ -0.44
GGA3-209ENST00000580646 COA1Q9GZY4 146 aa12.31□□□□□ -0.44
GGA3-209ENST00000580646 ABT1Q9ULW3 272 aaKnown RBP12.31□□□□□ -0.44
GGA3-209ENST00000580646 PSME4Q14997 1843 aa12.3□□□□□ -0.44
GGA3-209ENST00000580646 TAF5LO75529 589 aa12.3□□□□□ -0.44
GGA3-209ENST00000580646 EGFRP00533 1210 aa12.3□□□□□ -0.44
GGA3-209ENST00000580646 KCNJ4P48050 445 aa12.3□□□□□ -0.44
GGA3-209ENST00000580646 VEGFBP49765 207 aa12.3□□□□□ -0.44
GGA3-209ENST00000580646 PTPN12Q05209 780 aaKnown RBP12.3□□□□□ -0.44
GGA3-209ENST00000580646 TAF7LQ5H9L4 462 aa12.3□□□□□ -0.44
GGA3-209ENST00000580646 LDHAL6AQ6ZMR3 332 aa12.3□□□□□ -0.44
GGA3-209ENST00000580646 HELBQ8NG08 1087 aaPredicted RBP12.3□□□□□ -0.44
GGA3-209ENST00000580646 ZNF594Q96JF6 807 aaPredicted RBP12.3□□□□□ -0.44
GGA3-209ENST00000580646 GMLQ99445 158 aa12.3□□□□□ -0.44
GGA3-209ENST00000580646 COPRSQ9NQ92 184 aa12.3□□□□□ -0.44
GGA3-209ENST00000580646 ARAP2Q8WZ64 1704 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 SNAP23O00161 211 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 CIAO1O76071 339 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 CELF2O95319 508 aaKnown RBP12.29□□□□□ -0.44
GGA3-209ENST00000580646 USP17L8P0C7I0 530 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 KLRK1P26718 216 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 ZNF280AP59817 542 aaPredicted RBP12.29□□□□□ -0.44
GGA3-209ENST00000580646 ATP8B2P98198 1209 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 POLA2Q14181 598 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 KIF4BQ2VIQ3 1234 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 USP48Q86UV5 1035 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
GGA3-209ENST00000580646 SSH3Q8TE77 659 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 CNNM1Q9NRU3 951 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 SUPT16HQ9Y5B9 1047 aaKnown RBP12.29□□□□□ -0.44
GGA3-209ENST00000580646 MROH5Q6ZUA9 1318 aa12.29□□□□□ -0.44
GGA3-209ENST00000580646 SRGAP3O43295 1099 aa12.28□□□□□ -0.44
GGA3-209ENST00000580646 DACT2Q5SW24 774 aa12.28□□□□□ -0.44
GGA3-209ENST00000580646 STRIP1Q5VSL9 837 aa12.28□□□□□ -0.44
GGA3-209ENST00000580646 CEP85Q6P2H3 762 aa12.28□□□□□ -0.44
GGA3-209ENST00000580646 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
GGA3-209ENST00000580646 KRT26Q7Z3Y9 468 aa12.28□□□□□ -0.44
GGA3-209ENST00000580646 FBXW7Q969H0 707 aa12.28□□□□□ -0.44
GGA3-209ENST00000580646 DCPSQ96C86 337 aaKnown RBP12.28□□□□□ -0.44
GGA3-209ENST00000580646 RIPOR2Q9Y4F9 1068 aa12.28□□□□□ -0.44
GGA3-209ENST00000580646 TLL2Q9Y6L7 1015 aa12.28□□□□□ -0.44
GGA3-209ENST00000580646 ZNF609O15014 1411 aa12.28□□□□□ -0.44
GGA3-209ENST00000580646 SCN9AQ15858 1988 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms