RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 ANKLE1Q8NAG6 615 aa3.32□□□□□ -1.88
CTC1-207ENST00000580299 NFATC2IPQ8NCF5 419 aa3.32□□□□□ -1.88
CTC1-207ENST00000580299 NECTIN2Q92692 538 aa3.32□□□□□ -1.88
CTC1-207ENST00000580299 RBM17Q96I25 401 aaKnown RBP3.32□□□□□ -1.88
CTC1-207ENST00000580299 GAS2L1Q99501 681 aaPredicted RBP3.32□□□□□ -1.88
CTC1-207ENST00000580299 NYXQ9GZU5 481 aa3.32□□□□□ -1.88
CTC1-207ENST00000580299 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.32□□□□□ -1.88
CTC1-207ENST00000580299 TBC1D2BQ9UPU7 963 aa3.32□□□□□ -1.88
CTC1-207ENST00000580299 FRMPD3Q5JV73 1810 aa3.32□□□□□ -1.88
CTC1-207ENST00000580299 SCN9AQ15858 1988 aa3.32□□□□□ -1.88
CTC1-207ENST00000580299 KMT2BQ9UMN6 2715 aaPredicted RBP3.31□□□□□ -1.88
CTC1-207ENST00000580299 PLXNA1Q9UIW2 1896 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 COL1A1P02452 1464 aaPredicted RBP3.31□□□□□ -1.88
CTC1-207ENST00000580299 MYPNQ86TC9 1320 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 PRR33A8MZF0 331 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 TCERG1O14776 1098 aaKnown RBP3.31□□□□□ -1.88
CTC1-207ENST00000580299 IL6STP40189 918 aaPredicted RBP3.31□□□□□ -1.88
CTC1-207ENST00000580299 SMAD3P84022 425 aaKnown RBP3.31□□□□□ -1.88
CTC1-207ENST00000580299 PTPN12Q05209 780 aaKnown RBP3.31□□□□□ -1.88
CTC1-207ENST00000580299 AMOTQ4VCS5 1084 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 CLEC4GQ6UXB4 293 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 DZIP3Q86Y13 1208 aaKnown RBP3.31□□□□□ -1.88
CTC1-207ENST00000580299 USP38Q8NB14 1042 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 SLAIN1Q8ND83 568 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 HELBQ8NG08 1087 aaPredicted RBP3.31□□□□□ -1.88
CTC1-207ENST00000580299 PPM1EQ8WY54 764 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 PAWRQ96IZ0 340 aaKnown RBP3.31□□□□□ -1.88
CTC1-207ENST00000580299 WNK4Q96J92 1243 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 UIMC1Q96RL1 719 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 CRAMP1Q96RY5 1269 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 TEX13AQ9BXU3 409 aaPredicted RBP3.31□□□□□ -1.88
CTC1-207ENST00000580299 ZBTB47Q9UFB7 747 aaPredicted RBP3.31□□□□□ -1.88
CTC1-207ENST00000580299 RIPOR2Q9Y4F9 1068 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 CFAP54Q96N23 3096 aa3.31□□□□□ -1.88
CTC1-207ENST00000580299 SIPA1L3O60292 1781 aaPredicted RBP3.3□□□□□ -1.88
CTC1-207ENST00000580299 ADGRA2Q96PE1 1338 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 FAM86C2PA6NEL3 165 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 UNCXA6NJT0 531 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 FAM177BA6PVY3 158 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 G3V3G9 751 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 PSMD14O00487 310 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 PPP1R12BO60237 982 aaPredicted RBP3.3□□□□□ -1.88
CTC1-207ENST00000580299 KRT37O76014 449 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 CAMTA2O94983 1202 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 EGFRP00533 1210 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 FBLN1P23142 703 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 HOXA10P31260 410 aaPredicted RBP3.3□□□□□ -1.88
CTC1-207ENST00000580299 LACTBP83111 547 aaPredicted RBP3.3□□□□□ -1.88
CTC1-207ENST00000580299 MDM2Q00987 491 aaPredicted RBP3.3□□□□□ -1.88
CTC1-207ENST00000580299 SCARF1Q14162 830 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 ACAP1Q15027 740 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 CRY2Q49AN0 593 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 AKNAD1Q5T1N1 836 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 DCAF8Q5TAQ9 597 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 TTC5Q8N0Z6 440 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 DEFB118Q96PH6 123 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 RTFDC1Q9BY42 306 aaPredicted RBP3.3□□□□□ -1.88
CTC1-207ENST00000580299 NBPF3Q9H094 633 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 EPHX3Q9H6B9 360 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 PRKAG2Q9UGJ0 569 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 SRRDQ9UH36 339 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 TAOK2Q9UL54 1235 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 ANGEL1Q9UNK9 670 aaKnown RBP3.3□□□□□ -1.88
CTC1-207ENST00000580299 NIP7Q9Y221 180 aaKnown RBP eCLIP3.3□□□□□ -1.88
CTC1-207ENST00000580299 ATP6V0A2Q9Y487 856 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 GBF1Q92538 1859 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 A0A0G2JMZ2 1700 aa3.3□□□□□ -1.88
CTC1-207ENST00000580299 CDH23Q9H251 3354 aa3.29□□□□□ -1.88
CTC1-207ENST00000580299 ATRXP46100 2492 aa3.29□□□□□ -1.88
CTC1-207ENST00000580299 ASTN2O75129 1339 aaPredicted RBP3.29□□□□□ -1.88
CTC1-207ENST00000580299 HAX1O00165 279 aa3.29□□□□□ -1.88
CTC1-207ENST00000580299 PPM1GO15355 546 aaPredicted RBP3.29□□□□□ -1.88
CTC1-207ENST00000580299 FMNL1O95466 1100 aaPredicted RBP3.29□□□□□ -1.88
CTC1-207ENST00000580299 PRKG1Q13976 671 aa3.29□□□□□ -1.88
CTC1-207ENST00000580299 LDLRAD1Q5T700 205 aa3.29□□□□□ -1.88
CTC1-207ENST00000580299 APOBEC3FQ8IUX4 373 aaKnown RBP3.29□□□□□ -1.88
CTC1-207ENST00000580299 ZNF496Q96IT1 587 aaPredicted RBP3.29□□□□□ -1.88
CTC1-207ENST00000580299 NECAB3Q96P71 396 aaPredicted RBP3.29□□□□□ -1.88
CTC1-207ENST00000580299 EYA1Q99502 592 aa3.29□□□□□ -1.88
CTC1-207ENST00000580299 UNC93B1Q9H1C4 597 aa3.29□□□□□ -1.88
CTC1-207ENST00000580299 SLC12A5Q9H2X9 1139 aa3.29□□□□□ -1.88
CTC1-207ENST00000580299 TTYH1Q9H313 450 aaPredicted RBP3.29□□□□□ -1.88
CTC1-207ENST00000580299 C11orf49Q9H6J7 331 aa3.29□□□□□ -1.88
CTC1-207ENST00000580299 SLC52A2Q9HAB3 445 aa3.29□□□□□ -1.88
CTC1-207ENST00000580299 CXXC1Q9P0U4 656 aaPredicted RBP3.29□□□□□ -1.88
CTC1-207ENST00000580299 DUOX1Q9NRD9 1551 aa3.29□□□□□ -1.88
CTC1-207ENST00000580299 WDFY4Q6ZS81 3184 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 C5orf42Q9H799 3197 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 CHD8Q9HCK8 2581 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 ABCC12Q96J65 1359 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 IBTKQ9P2D0 1353 aaPredicted RBP3.28□□□□□ -1.88
CTC1-207ENST00000580299 CCL15-CCL14A0A0B4J2E2 113 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 TESPA1A2RU30 521 aaPredicted RBP3.28□□□□□ -1.88
CTC1-207ENST00000580299 YDJCA8MPS7 323 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 ECE2O60344 883 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 GFRA3O60609 400 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 PSMC4P43686 418 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 TNNT2P45379 298 aaPredicted RBP3.28□□□□□ -1.88
CTC1-207ENST00000580299 IREB2P48200 963 aaKnown RBP3.28□□□□□ -1.88
CTC1-207ENST00000580299 VASPP50552 380 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms