RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 HSPA6P17066 643 aa18.08■□□□□ 0.48
MKS1-207ENST00000578789 RPS12P25398 132 aaKnown RBP18.08■□□□□ 0.48
MKS1-207ENST00000578789 PTPN12Q05209 780 aaKnown RBP18.08■□□□□ 0.48
MKS1-207ENST00000578789 MTX1Q13505 466 aa18.08■□□□□ 0.48
MKS1-207ENST00000578789 LRRC24Q50LG9 513 aa18.08■□□□□ 0.48
MKS1-207ENST00000578789 CHADLQ6NUI6 762 aa18.08■□□□□ 0.48
MKS1-207ENST00000578789 KLHDC4Q8TBB5 520 aa18.08■□□□□ 0.48
MKS1-207ENST00000578789 DPF2Q92785 391 aa18.08■□□□□ 0.48
MKS1-207ENST00000578789 RCAN3Q9UKA8 241 aa18.08■□□□□ 0.48
MKS1-207ENST00000578789 SNAP23O00161 211 aa18.07■□□□□ 0.48
MKS1-207ENST00000578789 UBE4AQ14139 1066 aa18.07■□□□□ 0.48
MKS1-207ENST00000578789 VGLL2Q8N8G2 317 aa18.07■□□□□ 0.48
MKS1-207ENST00000578789 ADARB2Q9NS39 739 aaKnown RBP18.07■□□□□ 0.48
MKS1-207ENST00000578789 FBXO3Q9UK99 471 aa18.07■□□□□ 0.48
MKS1-207ENST00000578789 EAPPQ56P03 285 aaPredicted RBP18.06■□□□□ 0.48
MKS1-207ENST00000578789 USP50Q70EL3 339 aaPredicted RBP18.06■□□□□ 0.48
MKS1-207ENST00000578789 ZBTB12Q9Y330 459 aaPredicted RBP18.06■□□□□ 0.48
MKS1-207ENST00000578789 USP17L3A6NCW0 530 aa18.05■□□□□ 0.48
MKS1-207ENST00000578789 USP17L4A6NCW7 530 aa18.05■□□□□ 0.48
MKS1-207ENST00000578789 EYA2O00167 538 aa18.05■□□□□ 0.48
MKS1-207ENST00000578789 PLIN1O60240 522 aa18.05■□□□□ 0.48
MKS1-207ENST00000578789 CIAO1O76071 339 aa18.05■□□□□ 0.48
MKS1-207ENST00000578789 GNAI2P04899 355 aa18.05■□□□□ 0.48
MKS1-207ENST00000578789 METTL24Q5JXM2 366 aa18.05■□□□□ 0.48
MKS1-207ENST00000578789 RSBN1LQ6PCB5 846 aaPredicted RBP18.05■□□□□ 0.48
MKS1-207ENST00000578789 USP17L1Q7RTZ2 530 aa18.05■□□□□ 0.48
MKS1-207ENST00000578789 MICALL2Q8IY33 904 aa18.05■□□□□ 0.48
MKS1-207ENST00000578789 AGBL3Q8NEM8 1001 aa18.05■□□□□ 0.48
MKS1-207ENST00000578789 CNOT7Q9UIV1 285 aaKnown RBP18.05■□□□□ 0.48
MKS1-207ENST00000578789 PDE8BO95263 885 aa18.04■□□□□ 0.48
MKS1-207ENST00000578789 ATG9AQ7Z3C6 839 aa18.04■□□□□ 0.48
MKS1-207ENST00000578789 ITPRIPQ8IWB1 547 aa18.04■□□□□ 0.48
MKS1-207ENST00000578789 GMLQ99445 158 aa18.04■□□□□ 0.48
MKS1-207ENST00000578789 CD209Q9NNX6 404 aa18.04■□□□□ 0.48
MKS1-207ENST00000578789 COPRSQ9NQ92 184 aa18.04■□□□□ 0.48
MKS1-207ENST00000578789 SHTN1A0MZ66 631 aa18.03■□□□□ 0.48
MKS1-207ENST00000578789 MS4A1P11836 297 aa18.03■□□□□ 0.48
MKS1-207ENST00000578789 IL1R1P14778 569 aa18.03■□□□□ 0.48
MKS1-207ENST00000578789 DACT2Q5SW24 774 aa18.03■□□□□ 0.48
MKS1-207ENST00000578789 STRIP1Q5VSL9 837 aa18.03■□□□□ 0.48
MKS1-207ENST00000578789 ZNF804AQ7Z570 1209 aa18.03■□□□□ 0.48
MKS1-207ENST00000578789 ARAP2Q8WZ64 1704 aa18.03■□□□□ 0.48
MKS1-207ENST00000578789 MYO3BQ8WXR4 1341 aa18.02■□□□□ 0.48
MKS1-207ENST00000578789 H7C1D1 291 aa18.02■□□□□ 0.48
MKS1-207ENST00000578789 APLP1P51693 650 aa18.02■□□□□ 0.48
MKS1-207ENST00000578789 TRPM4Q8TD43 1214 aa18.02■□□□□ 0.48
MKS1-207ENST00000578789 PASKQ96RG2 1323 aa18.01■□□□□ 0.47
MKS1-207ENST00000578789 ZBTB7BO15156 539 aaPredicted RBP18.01■□□□□ 0.47
MKS1-207ENST00000578789 SRGAP3O43295 1099 aa18.01■□□□□ 0.47
MKS1-207ENST00000578789 FGFR2P21802 821 aa18.01■□□□□ 0.47
MKS1-207ENST00000578789 ZNF280AP59817 542 aaPredicted RBP18.01■□□□□ 0.47
MKS1-207ENST00000578789 PUM3Q15397 648 aaKnown RBP18.01■□□□□ 0.47
MKS1-207ENST00000578789 PANK1Q8TE04 598 aa18.01■□□□□ 0.47
MKS1-207ENST00000578789 PA2G4Q9UQ80 394 aaKnown RBP18.01■□□□□ 0.47
MKS1-207ENST00000578789 CLEC11AQ9Y240 323 aa18.01■□□□□ 0.47
MKS1-207ENST00000578789 ITGBL1O95965 494 aaPredicted RBP18■□□□□ 0.47
MKS1-207ENST00000578789 IL15P40933 162 aaPredicted RBP18■□□□□ 0.47
MKS1-207ENST00000578789 HIRAP54198 1017 aaPredicted RBP18■□□□□ 0.47
MKS1-207ENST00000578789 SIL1Q9H173 461 aa18■□□□□ 0.47
MKS1-207ENST00000578789 PGAP2Q9UHJ9 254 aa18■□□□□ 0.47
MKS1-207ENST00000578789 MVPQ14764 893 aaKnown RBP17.99■□□□□ 0.47
MKS1-207ENST00000578789 MAP1SQ66K74 1059 aaPredicted RBP17.99■□□□□ 0.47
MKS1-207ENST00000578789 TTLL5Q6EMB2 1281 aa17.99■□□□□ 0.47
MKS1-207ENST00000578789 ZC3H15Q8WU90 426 aaKnown RBP17.99■□□□□ 0.47
MKS1-207ENST00000578789 FAM84BQ96KN1 310 aaPredicted RBP17.99■□□□□ 0.47
MKS1-207ENST00000578789 PNMA6EA0A0J9YXQ4 647 aa17.98■□□□□ 0.47
MKS1-207ENST00000578789 EGFRP00533 1210 aa17.98■□□□□ 0.47
MKS1-207ENST00000578789 HIBADHP31937 336 aaKnown RBP17.98■□□□□ 0.47
MKS1-207ENST00000578789 GYG1P46976 350 aa17.98■□□□□ 0.47
MKS1-207ENST00000578789 FKBP1AP62942 108 aaKnown RBP17.98■□□□□ 0.47
MKS1-207ENST00000578789 GTF2IP78347 998 aa17.98■□□□□ 0.47
MKS1-207ENST00000578789 POLA2Q14181 598 aa17.98■□□□□ 0.47
MKS1-207ENST00000578789 SAMD7Q7Z3H4 446 aa17.98■□□□□ 0.47
MKS1-207ENST00000578789 FBXO33Q7Z6M2 555 aa17.98■□□□□ 0.47
MKS1-207ENST00000578789 CNTROBQ8N137 903 aa17.98■□□□□ 0.47
MKS1-207ENST00000578789 TDRD7Q8NHU6 1098 aaKnown RBP17.98■□□□□ 0.47
MKS1-207ENST00000578789 FBXW7Q969H0 707 aa17.98■□□□□ 0.47
MKS1-207ENST00000578789 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
MKS1-207ENST00000578789 MYH13Q9UKX3 1938 aa17.98■□□□□ 0.47
MKS1-207ENST00000578789 FAM205AQ6ZU69 1335 aa17.98■□□□□ 0.47
MKS1-207ENST00000578789 TRPM7Q96QT4 1865 aa17.97■□□□□ 0.47
MKS1-207ENST00000578789 IFIT1P09914 478 aaKnown RBP17.97■□□□□ 0.47
MKS1-207ENST00000578789 USP17L8P0C7I0 530 aa17.97■□□□□ 0.47
MKS1-207ENST00000578789 MMP14P50281 582 aa17.97■□□□□ 0.47
MKS1-207ENST00000578789 KIF4BQ2VIQ3 1234 aa17.97■□□□□ 0.47
MKS1-207ENST00000578789 TBC1D10BQ4KMP7 808 aaPredicted RBP17.97■□□□□ 0.47
MKS1-207ENST00000578789 LPIN2Q92539 896 aa17.97■□□□□ 0.47
MKS1-207ENST00000578789 MXD3Q9BW11 206 aa17.97■□□□□ 0.47
MKS1-207ENST00000578789 C1orf115Q9H7X2 142 aa17.97■□□□□ 0.47
MKS1-207ENST00000578789 CEP126Q9P2H0 1117 aa17.97■□□□□ 0.47
MKS1-207ENST00000578789 SASH1O94885 1247 aa17.96■□□□□ 0.47
MKS1-207ENST00000578789 SLC5A1P13866 664 aa17.96■□□□□ 0.47
MKS1-207ENST00000578789 ATP8B2P98198 1209 aa17.96■□□□□ 0.47
MKS1-207ENST00000578789 CAVIN4Q5BKX8 364 aa17.96■□□□□ 0.47
MKS1-207ENST00000578789 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.96■□□□□ 0.47
MKS1-207ENST00000578789 SSH3Q8TE77 659 aa17.96■□□□□ 0.47
MKS1-207ENST00000578789 PDE3AQ14432 1141 aa17.95■□□□□ 0.46
MKS1-207ENST00000578789 ATP2B3Q16720 1220 aa17.95■□□□□ 0.46
MKS1-207ENST00000578789 CERS5Q8N5B7 392 aa17.95■□□□□ 0.46
MKS1-207ENST00000578789 MYOZ2Q9NPC6 264 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms