RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 VARSP26640 1264 aaKnown RBP6.31□□□□□ -1.4
BRIP1-202ENST00000577598 HALP42357 657 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 DAB2P98082 770 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 DNAJC21Q5F1R6 531 aaKnown RBP6.31□□□□□ -1.4
BRIP1-202ENST00000577598 MFSD4BQ5TF39 518 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 CCDC70Q6NSX1 233 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 IPCEF1Q8WWN9 437 aaPredicted RBP6.31□□□□□ -1.4
BRIP1-202ENST00000577598 KCNH8Q96L42 1107 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 SETD1BQ9UPS6 1966 aaKnown RBP6.3□□□□□ -1.4
BRIP1-202ENST00000577598 RAG1P15918 1043 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 RASA3Q14644 834 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 SRLQ86TD4 932 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 DGKHQ86XP1 1220 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 GOLM1Q8NBJ4 401 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 UCMAQ8WVF2 138 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 FEZ1Q99689 392 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 GRIN3BO60391 1043 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 CALRP27797 417 aaKnown RBP6.3□□□□□ -1.4
BRIP1-202ENST00000577598 NAP1L1P55209 391 aaKnown RBP6.3□□□□□ -1.4
BRIP1-202ENST00000577598 FKBPLQ9UIM3 349 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 STRA8Q7Z7C7 330 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 PNMA8AQ86V59 439 aaPredicted RBP6.3□□□□□ -1.4
BRIP1-202ENST00000577598 TTC30AQ86WT1 665 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 PPM1NQ8N819 430 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 SCYL1Q96KG9 808 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 TNIP3Q96KP6 325 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 PCDH10Q9P2E7 1040 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 AFG3L2Q9Y4W6 797 aa6.3□□□□□ -1.4
BRIP1-202ENST00000577598 SNX2O60749 519 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 SLC10A3P09131 477 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 U2AF1L5P0DN76 240 aaPredicted RBP6.29□□□□□ -1.4
BRIP1-202ENST00000577598 CHKAP35790 457 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 U2AF1Q01081 240 aaKnown RBP eCLIP6.29□□□□□ -1.44e-6■■□□□ 12.1
BRIP1-202ENST00000577598 G3BP1Q13283 466 aaKnown RBP eCLIP6.29□□□□□ -1.4
BRIP1-202ENST00000577598 RAB33AQ14088 237 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 FAM26DQ5JW98 314 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 TCEA3O75764 348 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 COPB2P35606 906 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 MECOMQ03112 1051 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 ADCY1Q08828 1119 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 TIGD6Q17RP2 521 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 SWT1Q5T5J6 900 aaKnown RBP6.29□□□□□ -1.4
BRIP1-202ENST00000577598 TRIM50Q86XT4 487 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 SNX21Q969T3 373 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 AIDAQ96BJ3 306 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 CDC6Q99741 560 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 AP1M1Q9BXS5 423 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 GTPBP4Q9BZE4 634 aaKnown RBP6.29□□□□□ -1.4
BRIP1-202ENST00000577598 FNIP2Q9P278 1114 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 PMM2O15305 246 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 PF4V1P10720 104 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 SCTRP47872 440 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 CTCFP49711 727 aaPredicted RBP6.29□□□□□ -1.4
BRIP1-202ENST00000577598 ALDH1L2Q3SY69 923 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 INO80DQ53TQ3 878 aaPredicted RBP6.29□□□□□ -1.4
BRIP1-202ENST00000577598 TYW1BQ6NUM6 668 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 FAM180BQ6P0A1 224 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 MAMSTRQ6ZN01 415 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 NIM1KQ8IY84 436 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 TEX19Q8NA77 164 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 WDR66Q8TBY9 1149 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 SKA1Q96BD8 255 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 OSBPL7Q9BZF2 842 aa6.29□□□□□ -1.4
BRIP1-202ENST00000577598 DDX20Q9UHI6 824 aaKnown RBP6.29□□□□□ -1.4
BRIP1-202ENST00000577598 GOLGA6L6A8MZA4 724 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 VAMP1P23763 118 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 POU5F1Q01860 360 aaKnown RBP6.28□□□□□ -1.4
BRIP1-202ENST00000577598 RBL2Q08999 1139 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 ECM1Q16610 540 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 C16orf86Q6ZW13 317 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 ALDH8A1Q9H2A2 487 aaPredicted RBP6.28□□□□□ -1.4
BRIP1-202ENST00000577598 USP25Q9UHP3 1055 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 MCM8Q9UJA3 840 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 LRRC10BA6NIK2 292 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 RASGRP1O95267 797 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 IFIT1P09914 478 aaKnown RBP6.28□□□□□ -1.4
BRIP1-202ENST00000577598 C16orf46Q6P387 395 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 KCNK17Q96T54 332 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 TNKS2Q9H2K2 1166 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 SRA1Q9HD15 236 aaKnown RBP6.28□□□□□ -1.4
BRIP1-202ENST00000577598 FOXD3Q9UJU5 478 aaPredicted RBP6.28□□□□□ -1.4
BRIP1-202ENST00000577598 CFHP08603 1231 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 IARSP41252 1262 aaKnown RBP6.28□□□□□ -1.4
BRIP1-202ENST00000577598 AIMP1Q12904 312 aaKnown RBP6.28□□□□□ -1.4
BRIP1-202ENST00000577598 ANO4Q32M45 955 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 RPAINQ86UA6 219 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 FBXO27Q8NI29 283 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 SLC2A13Q96QE2 648 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 NBPF3Q9H094 633 aa6.28□□□□□ -1.4
BRIP1-202ENST00000577598 NOL7Q9UMY1 257 aaKnown RBP6.28□□□□□ -1.4
BRIP1-202ENST00000577598 CLGNO14967 610 aa6.27□□□□□ -1.41
BRIP1-202ENST00000577598 TIMM44O43615 452 aa6.27□□□□□ -1.41
BRIP1-202ENST00000577598 FAM163BP0C2L3 166 aa6.27□□□□□ -1.41
BRIP1-202ENST00000577598 MAN1A1P33908 653 aa6.27□□□□□ -1.41
BRIP1-202ENST00000577598 ATP6V1E1P36543 226 aa6.27□□□□□ -1.41
BRIP1-202ENST00000577598 CRKP46108 304 aa6.27□□□□□ -1.41
BRIP1-202ENST00000577598 ID4P47928 161 aa6.27□□□□□ -1.41
BRIP1-202ENST00000577598 SIM2Q14190 667 aaPredicted RBP6.27□□□□□ -1.41
BRIP1-202ENST00000577598 C1QTNF12Q5T7M4 302 aa6.27□□□□□ -1.41
BRIP1-202ENST00000577598 CEP63Q96MT8 703 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms