RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 PSMD2Q13200 908 aa4.23□□□□□ -1.73
COPS3-213ENST00000577210 KIAA0319Q5VV43 1072 aa4.23□□□□□ -1.73
COPS3-213ENST00000577210 ELMSAN1Q6PJG2 1045 aa4.23□□□□□ -1.73
COPS3-213ENST00000577210 C1orf127Q8N9H9 656 aa4.23□□□□□ -1.73
COPS3-213ENST00000577210 DDX54Q8TDD1 881 aaKnown RBP4.23□□□□□ -1.73
COPS3-213ENST00000577210 IGFLR1Q9H665 355 aa4.23□□□□□ -1.73
COPS3-213ENST00000577210 ZFATQ9P243 1243 aa4.23□□□□□ -1.73
COPS3-213ENST00000577210 SALL4Q9UJQ4 1053 aa4.23□□□□□ -1.73
COPS3-213ENST00000577210 SPDYE3A6NKU9 549 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 BTBD11A6QL63 1104 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 E9PSI1 815 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 EREGO14944 169 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 SORBS3O60504 671 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 EIF4BP23588 611 aaKnown RBP4.22□□□□□ -1.73
COPS3-213ENST00000577210 CHRNA4P43681 627 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 BAG6P46379 1132 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 CABP4P57796 275 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 PTPN12Q05209 780 aaKnown RBP4.22□□□□□ -1.73
COPS3-213ENST00000577210 TBC1D8BQ0IIM8 1120 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 ORC1Q13415 861 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 DIEXFQ68CQ4 756 aaKnown RBP4.22□□□□□ -1.73
COPS3-213ENST00000577210 TMC4Q7Z404 712 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 FAM35AQ86V20 835 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 TMEM102Q8N9M5 508 aaPredicted RBP4.22□□□□□ -1.73
COPS3-213ENST00000577210 TRIM11Q96F44 468 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 EHD4Q9H223 541 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 CHRDQ9H2X0 955 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 DNAJB12Q9NXW2 375 aaKnown RBP4.22□□□□□ -1.73
COPS3-213ENST00000577210 CNTN3Q9P232 1028 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 FAM8A1Q9UBU6 413 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 FOXD3Q9UJU5 478 aaPredicted RBP4.22□□□□□ -1.73
COPS3-213ENST00000577210 SLC6A14Q9UN76 642 aa4.22□□□□□ -1.73
COPS3-213ENST00000577210 A6NHS1 94 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 C1QTNF9BB2RNN3 333 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 K7ELQ4 463 aaPredicted RBP4.21□□□□□ -1.74
COPS3-213ENST00000577210 LILRB5O75023 590 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 RGS9O75916 674 aaPredicted RBP4.21□□□□□ -1.74
COPS3-213ENST00000577210 FURINP09958 794 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 ZNF16P17020 682 aaPredicted RBP4.21□□□□□ -1.74
COPS3-213ENST00000577210 PTPRAP18433 802 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 GSTT1P30711 240 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 DAB2P98082 770 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 PRPF40BQ6NWY9 871 aaKnown RBP4.21□□□□□ -1.74
COPS3-213ENST00000577210 RAB44Q7Z6P3 723 aaPredicted RBP4.21□□□□□ -1.74
COPS3-213ENST00000577210 CD163Q86VB7 1156 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 MAP4K3Q8IVH8 894 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 Q8N3U1 123 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 CEP120Q8N960 986 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 NSUN5Q96P11 429 aaKnown RBP4.21□□□□□ -1.74
COPS3-213ENST00000577210 MDFIQ99750 246 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 PBX4Q9BYU1 374 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 SRA1Q9HD15 236 aaKnown RBP4.21□□□□□ -1.74
COPS3-213ENST00000577210 PRDM6Q9NQX0 595 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 PARP2Q9UGN5 583 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 PPM1HQ9ULR3 514 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 AK5Q9Y6K8 562 aa4.21□□□□□ -1.74
COPS3-213ENST00000577210 RLBP1P12271 317 aa4.2□□□□□ -1.74
COPS3-213ENST00000577210 RANGAP1P46060 587 aaPredicted RBP4.2□□□□□ -1.74
COPS3-213ENST00000577210 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.2□□□□□ -1.74
COPS3-213ENST00000577210 RPS26P11Q5JNZ5 115 aaPredicted RBP4.2□□□□□ -1.74
COPS3-213ENST00000577210 FAM117BQ6P1L5 589 aa4.2□□□□□ -1.74
COPS3-213ENST00000577210 ALYREFQ86V81 257 aaKnown RBP4.2□□□□□ -1.74
COPS3-213ENST00000577210 ANKRD24Q8TF21 1146 aa4.2□□□□□ -1.74
COPS3-213ENST00000577210 WNT8BQ93098 351 aa4.2□□□□□ -1.74
COPS3-213ENST00000577210 PLD4Q96BZ4 506 aa4.2□□□□□ -1.74
COPS3-213ENST00000577210 OSMRQ99650 979 aa4.2□□□□□ -1.74
COPS3-213ENST00000577210 DUSP9Q99956 384 aaKnown RBP4.2□□□□□ -1.74
COPS3-213ENST00000577210 CEP44Q9C0F1 390 aa4.2□□□□□ -1.74
COPS3-213ENST00000577210 C12orf49Q9H741 205 aa4.2□□□□□ -1.74
COPS3-213ENST00000577210 LIN7BQ9HAP6 207 aa4.2□□□□□ -1.74
COPS3-213ENST00000577210 NPHS2Q9NP85 383 aa4.2□□□□□ -1.74
COPS3-213ENST00000577210 KANSL3Q9P2N6 904 aa4.2□□□□□ -1.74
COPS3-213ENST00000577210 PDE2AO00408 941 aaPredicted RBP4.19□□□□□ -1.74
COPS3-213ENST00000577210 CPB1P15086 417 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 ARL4DP49703 201 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 HP1BP3Q5SSJ5 553 aaPredicted RBP4.19□□□□□ -1.74
COPS3-213ENST00000577210 CEP135Q66GS9 1140 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 PSAPL1Q6NUJ1 521 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 CCNJLQ8IV13 435 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 FOXD4L4Q8WXT5 416 aaPredicted RBP4.19□□□□□ -1.74
COPS3-213ENST00000577210 BSNDQ8WZ55 320 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 CRELD1Q96HD1 420 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 BHLHE41Q9C0J9 482 aaPredicted RBP4.19□□□□□ -1.74
COPS3-213ENST00000577210 DZANK1Q9NVP4 752 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 NOP53Q9NZM5 478 aaKnown RBP4.19□□□□□ -1.74
COPS3-213ENST00000577210 VTI1BQ9UEU0 232 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 SAMM50Q9Y512 469 aa4.19□□□□□ -1.74
COPS3-213ENST00000577210 TMEM238LA0A1B0GVL6 79 aa4.18□□□□□ -1.74
COPS3-213ENST00000577210 A0A1W2PP55 124 aa4.18□□□□□ -1.74
COPS3-213ENST00000577210 ZBTB42B2RXF5 422 aa4.18□□□□□ -1.74
COPS3-213ENST00000577210 CYP2E1P05181 493 aaPredicted RBP4.18□□□□□ -1.74
COPS3-213ENST00000577210 ITGB7P26010 798 aa4.18□□□□□ -1.74
COPS3-213ENST00000577210 RBM25P49756 843 aaKnown RBP4.18□□□□□ -1.74
COPS3-213ENST00000577210 ST13P50502 369 aaKnown RBP4.18□□□□□ -1.74
COPS3-213ENST00000577210 PPP2R3AQ06190 1150 aa4.18□□□□□ -1.74
COPS3-213ENST00000577210 DTHD1Q6ZMT9 781 aa4.18□□□□□ -1.74
COPS3-213ENST00000577210 NPM2Q86SE8 214 aaKnown RBP4.18□□□□□ -1.74
COPS3-213ENST00000577210 DTWD1Q8N5C7 304 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms