RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 PPP1R42Q7Z4L9 355 aa12.29□□□□□ -0.44
TOM1L1-223ENST00000576932 SP8Q8IXZ3 490 aa12.29□□□□□ -0.44
TOM1L1-223ENST00000576932 ZNF34Q8IZ26 560 aa12.29□□□□□ -0.44
TOM1L1-223ENST00000576932 PHACTR3Q96KR7 559 aa12.29□□□□□ -0.44
TOM1L1-223ENST00000576932 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
TOM1L1-223ENST00000576932 TCERG1O14776 1098 aaKnown RBP12.28□□□□□ -0.44
TOM1L1-223ENST00000576932 RAD17O75943 681 aa12.28□□□□□ -0.44
TOM1L1-223ENST00000576932 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
TOM1L1-223ENST00000576932 C6orf132Q5T0Z8 1188 aa12.28□□□□□ -0.44
TOM1L1-223ENST00000576932 KRT26Q7Z3Y9 468 aa12.28□□□□□ -0.44
TOM1L1-223ENST00000576932 SLC51AQ86UW1 340 aa12.28□□□□□ -0.44
TOM1L1-223ENST00000576932 MPNDQ8N594 471 aa12.28□□□□□ -0.44
TOM1L1-223ENST00000576932 FAM163AQ96GL9 167 aaPredicted RBP12.28□□□□□ -0.44
TOM1L1-223ENST00000576932 CSRNP1Q96S65 589 aa12.28□□□□□ -0.44
TOM1L1-223ENST00000576932 ABCC4O15439 1325 aa12.28□□□□□ -0.44
TOM1L1-223ENST00000576932 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
TOM1L1-223ENST00000576932 PTGDRQ13258 359 aa12.27□□□□□ -0.45
TOM1L1-223ENST00000576932 TAF7Q15545 349 aaPredicted RBP12.27□□□□□ -0.45
TOM1L1-223ENST00000576932 GIGYF2Q6Y7W6 1299 aaKnown RBP12.27□□□□□ -0.45
TOM1L1-223ENST00000576932 DCPSQ96C86 337 aaKnown RBP12.27□□□□□ -0.45
TOM1L1-223ENST00000576932 YDJCA8MPS7 323 aa12.26□□□□□ -0.45
TOM1L1-223ENST00000576932 ST18O60284 1047 aa12.26□□□□□ -0.45
TOM1L1-223ENST00000576932 GPTP24298 496 aa12.26□□□□□ -0.45
TOM1L1-223ENST00000576932 NOM1Q5C9Z4 860 aaKnown RBP12.26□□□□□ -0.45
TOM1L1-223ENST00000576932 TTLL7Q6ZT98 887 aa12.26□□□□□ -0.45
TOM1L1-223ENST00000576932 MCM10Q7L590 875 aa12.26□□□□□ -0.45
TOM1L1-223ENST00000576932 TMC4Q7Z404 712 aa12.26□□□□□ -0.45
TOM1L1-223ENST00000576932 FKBP1BP68106 108 aa12.25□□□□□ -0.45
TOM1L1-223ENST00000576932 MAP2K5Q13163 448 aa12.25□□□□□ -0.45
TOM1L1-223ENST00000576932 CC2D1BQ5T0F9 858 aaKnown RBP12.25□□□□□ -0.45
TOM1L1-223ENST00000576932 PNISRQ8TF01 805 aaKnown RBP12.25□□□□□ -0.45
TOM1L1-223ENST00000576932 ADAM33Q9BZ11 813 aa12.25□□□□□ -0.45
TOM1L1-223ENST00000576932 ERBB4Q15303 1308 aa12.25□□□□□ -0.45
TOM1L1-223ENST00000576932 MKI67P46013 3256 aaKnown RBP12.25□□□□□ -0.45
TOM1L1-223ENST00000576932 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
TOM1L1-223ENST00000576932 SHTN1A0MZ66 631 aa12.24□□□□□ -0.45
TOM1L1-223ENST00000576932 POLR2AP24928 1970 aaKnown RBP12.24□□□□□ -0.45
TOM1L1-223ENST00000576932 HABP4Q5JVS0 413 aaKnown RBP12.24□□□□□ -0.45
TOM1L1-223ENST00000576932 SAMD7Q7Z3H4 446 aa12.24□□□□□ -0.45
TOM1L1-223ENST00000576932 NGEFQ8N5V2 710 aa12.24□□□□□ -0.45
TOM1L1-223ENST00000576932 UTP14AQ9BVJ6 771 aaKnown RBP12.24□□□□□ -0.45
TOM1L1-223ENST00000576932 ZBTB3Q9H5J0 574 aa12.24□□□□□ -0.45
TOM1L1-223ENST00000576932 RBM27Q9P2N5 1060 aaKnown RBP12.24□□□□□ -0.45
TOM1L1-223ENST00000576932 NUDCQ9Y266 331 aa12.24□□□□□ -0.45
TOM1L1-223ENST00000576932 DUOX1Q9NRD9 1551 aa12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 ADM5C9JUS6 153 aa12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 GRAPQ13588 217 aa12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 TBC1D10BQ4KMP7 808 aaPredicted RBP12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 FBXO46Q6PJ61 603 aaPredicted RBP12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 DLK2Q6UY11 383 aa12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 RASAL3Q86YV0 1011 aa12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 SULF1Q8IWU6 871 aa12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 GRAPLQ8TC17 118 aaPredicted RBP12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 HDAC9Q9UKV0 1011 aa12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 LRRC37AA6NMS7 1700 aa12.23□□□□□ -0.45
TOM1L1-223ENST00000576932 PSMD14O00487 310 aa12.22□□□□□ -0.45
TOM1L1-223ENST00000576932 PBX2P40425 430 aa12.22□□□□□ -0.45
TOM1L1-223ENST00000576932 TSR1Q2NL82 804 aaKnown RBP12.22□□□□□ -0.45
TOM1L1-223ENST00000576932 DDX46Q7L014 1031 aaKnown RBP12.22□□□□□ -0.45
TOM1L1-223ENST00000576932 ZNF296Q8WUU4 475 aaPredicted RBP12.22□□□□□ -0.45
TOM1L1-223ENST00000576932 DAXXQ9UER7 740 aaPredicted RBP12.22□□□□□ -0.45
TOM1L1-223ENST00000576932 RRP7AQ9Y3A4 280 aaKnown RBP12.22□□□□□ -0.45
TOM1L1-223ENST00000576932 KDM3BQ7LBC6 1761 aa12.22□□□□□ -0.45
TOM1L1-223ENST00000576932 ZNF609O15014 1411 aa12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 PAPPA2Q9BXP8 1791 aa12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 PPP1R3GB7ZBB8 358 aa12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 EGFRP00533 1210 aa12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 MYL6BP14649 208 aa12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 EIF4A1P60842 406 aaKnown RBP12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 TRIM26Q12899 539 aaPredicted RBP12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 DCTN1Q14203 1278 aa12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 KIF4BQ2VIQ3 1234 aa12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 VARS2Q5ST30 1063 aaKnown RBP12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 CFHR5Q9BXR6 569 aa12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 SLC24A3Q9HC58 644 aa12.21□□□□□ -0.45
TOM1L1-223ENST00000576932 LAMB2P55268 1798 aa12.2□□□□□ -0.46
TOM1L1-223ENST00000576932 DDX60Q8IY21 1712 aaKnown RBP12.2□□□□□ -0.46
TOM1L1-223ENST00000576932 WASHC4Q2M389 1173 aa12.2□□□□□ -0.46
TOM1L1-223ENST00000576932 HSP90AB3PQ58FF7 597 aa12.2□□□□□ -0.46
TOM1L1-223ENST00000576932 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
TOM1L1-223ENST00000576932 CDCA5Q96FF9 252 aa12.2□□□□□ -0.46
TOM1L1-223ENST00000576932 GGA3Q9NZ52 723 aa12.2□□□□□ -0.46
TOM1L1-223ENST00000576932 PITPNM2Q9BZ72 1349 aa12.19□□□□□ -0.46
TOM1L1-223ENST00000576932 HTTP42858 3142 aa12.19□□□□□ -0.46
TOM1L1-223ENST00000576932 GPR37O15354 613 aa12.19□□□□□ -0.46
TOM1L1-223ENST00000576932 TM4SF4P48230 202 aa12.19□□□□□ -0.46
TOM1L1-223ENST00000576932 LRP10Q7Z4F1 713 aa12.19□□□□□ -0.46
TOM1L1-223ENST00000576932 CDHR5Q9HBB8 845 aa12.19□□□□□ -0.46
TOM1L1-223ENST00000576932 GPR25O00155 361 aa12.18□□□□□ -0.46
TOM1L1-223ENST00000576932 VIL1P09327 827 aaKnown RBP12.18□□□□□ -0.46
TOM1L1-223ENST00000576932 U2AF1L5P0DN76 240 aaPredicted RBP12.18□□□□□ -0.46
TOM1L1-223ENST00000576932 U2AF1Q01081 240 aaKnown RBP eCLIP12.18□□□□□ -0.46
TOM1L1-223ENST00000576932 INTS3Q68E01 1043 aaKnown RBP12.18□□□□□ -0.46
TOM1L1-223ENST00000576932 EYA3Q99504 573 aa12.18□□□□□ -0.46
TOM1L1-223ENST00000576932 DBNDD1Q9H9R9 158 aa12.18□□□□□ -0.46
TOM1L1-223ENST00000576932 MIS18AQ9NYP9 233 aa12.18□□□□□ -0.46
TOM1L1-223ENST00000576932 RTL9Q8NET4 1388 aa12.18□□□□□ -0.46
TOM1L1-223ENST00000576932 SH3TC1Q8TE82 1336 aa12.17□□□□□ -0.46
TOM1L1-223ENST00000576932 TBC1D8O95759 1140 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms