RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PTPRCP08575 1304 aa11.48□□□□□ -0.57
NDE1-207ENST00000573203 ADAMTSL1Q8N6G6 1762 aa11.47□□□□□ -0.57
NDE1-207ENST00000573203 ECE2O60344 883 aa11.47□□□□□ -0.57
NDE1-207ENST00000573203 ATP2B4P23634 1241 aa11.47□□□□□ -0.57
NDE1-207ENST00000573203 GMPSP49915 693 aaPredicted RBP11.47□□□□□ -0.57
NDE1-207ENST00000573203 DOK7Q18PE1 504 aa11.47□□□□□ -0.57
NDE1-207ENST00000573203 ALDH1L2Q3SY69 923 aa11.47□□□□□ -0.57
NDE1-207ENST00000573203 MPHOSPH8Q99549 860 aa11.47□□□□□ -0.57
NDE1-207ENST00000573203 BMP2KQ9NSY1 1161 aaPredicted RBP11.47□□□□□ -0.57
NDE1-207ENST00000573203 SMC4Q9NTJ3 1288 aa11.47□□□□□ -0.57
NDE1-207ENST00000573203 MINPP1Q9UNW1 487 aa11.47□□□□□ -0.57
NDE1-207ENST00000573203 ANKRD18BA2A2Z9 1011 aa11.46□□□□□ -0.57
NDE1-207ENST00000573203 CT47B1P0C2W7 299 aaPredicted RBP11.46□□□□□ -0.57
NDE1-207ENST00000573203 FOXO4P98177 505 aa11.46□□□□□ -0.57
NDE1-207ENST00000573203 IFIT5Q13325 482 aaKnown RBP11.46□□□□□ -0.57
NDE1-207ENST00000573203 USP50Q70EL3 339 aaPredicted RBP11.46□□□□□ -0.57
NDE1-207ENST00000573203 ADARB2Q9NS39 739 aaKnown RBP11.46□□□□□ -0.57
NDE1-207ENST00000573203 GPRC5DQ9NZD1 345 aa11.46□□□□□ -0.57
NDE1-207ENST00000573203 PSMD14O00487 310 aa11.45□□□□□ -0.58
NDE1-207ENST00000573203 CCT4P50991 539 aaKnown RBP11.45□□□□□ -0.58
NDE1-207ENST00000573203 MAP1SQ66K74 1059 aaPredicted RBP11.45□□□□□ -0.58
NDE1-207ENST00000573203 LMBR1LQ6UX01 489 aa11.45□□□□□ -0.58
NDE1-207ENST00000573203 DNAJC5GQ8N7S2 189 aa11.45□□□□□ -0.58
NDE1-207ENST00000573203 SLC39A7Q92504 469 aa11.45□□□□□ -0.58
NDE1-207ENST00000573203 TRPC6Q9Y210 931 aa11.45□□□□□ -0.58
NDE1-207ENST00000573203 SCN9AQ15858 1988 aa11.45□□□□□ -0.58
NDE1-207ENST00000573203 C7P10643 843 aa11.44□□□□□ -0.58
NDE1-207ENST00000573203 CCDC57Q2TAC2 916 aa11.44□□□□□ -0.58
NDE1-207ENST00000573203 TAF7LQ5H9L4 462 aa11.44□□□□□ -0.58
NDE1-207ENST00000573203 EPHA10Q5JZY3 1008 aa11.44□□□□□ -0.58
NDE1-207ENST00000573203 CNTROBQ8N137 903 aa11.44□□□□□ -0.58
NDE1-207ENST00000573203 SUCLG2Q96I99 432 aa11.44□□□□□ -0.58
NDE1-207ENST00000573203 ANKRD2Q9GZV1 360 aa11.44□□□□□ -0.58
NDE1-207ENST00000573203 KCNQ5Q9NR82 932 aa11.44□□□□□ -0.58
NDE1-207ENST00000573203 LEMD3Q9Y2U8 911 aa11.44□□□□□ -0.58
NDE1-207ENST00000573203 PSME4Q14997 1843 aa11.44□□□□□ -0.58
NDE1-207ENST00000573203 TTLL13PA6NNM8 815 aa11.43□□□□□ -0.58
NDE1-207ENST00000573203 H7C1D1 291 aa11.43□□□□□ -0.58
NDE1-207ENST00000573203 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
NDE1-207ENST00000573203 KCNJ4P48050 445 aa11.43□□□□□ -0.58
NDE1-207ENST00000573203 ATN1P54259 1190 aaPredicted RBP11.43□□□□□ -0.58
NDE1-207ENST00000573203 MICALL2Q8IY33 904 aa11.43□□□□□ -0.58
NDE1-207ENST00000573203 DPF2Q92785 391 aa11.43□□□□□ -0.58
NDE1-207ENST00000573203 KLRG1Q96E93 195 aa11.43□□□□□ -0.58
NDE1-207ENST00000573203 CNOT7Q9UIV1 285 aaKnown RBP11.43□□□□□ -0.58
NDE1-207ENST00000573203 MED23Q9ULK4 1368 aa11.42□□□□□ -0.58
NDE1-207ENST00000573203 ZNF804BA4D1E1 1349 aa11.42□□□□□ -0.58
NDE1-207ENST00000573203 UTYO14607 1347 aa11.42□□□□□ -0.58
NDE1-207ENST00000573203 PASKQ96RG2 1323 aa11.42□□□□□ -0.58
NDE1-207ENST00000573203 A0A1B0GUL6 1792 aa11.42□□□□□ -0.58
NDE1-207ENST00000573203 WTIPA6NIX2 430 aaPredicted RBP11.42□□□□□ -0.58
NDE1-207ENST00000573203 VIL1P09327 827 aaKnown RBP11.42□□□□□ -0.58
NDE1-207ENST00000573203 NBPF7P0C2Y1 421 aaPredicted RBP11.42□□□□□ -0.58
NDE1-207ENST00000573203 RPS12P25398 132 aaKnown RBP11.42□□□□□ -0.58
NDE1-207ENST00000573203 CHRNDQ07001 517 aa11.42□□□□□ -0.58
NDE1-207ENST00000573203 PODNQ7Z5L7 613 aa11.42□□□□□ -0.58
NDE1-207ENST00000573203 NOB1Q9ULX3 412 aaKnown RBP11.42□□□□□ -0.58
NDE1-207ENST00000573203 SHTN1A0MZ66 631 aa11.41□□□□□ -0.58
NDE1-207ENST00000573203 TMEM88BA6NKF7 163 aa11.41□□□□□ -0.58
NDE1-207ENST00000573203 RARSP54136 660 aaKnown RBP11.41□□□□□ -0.58
NDE1-207ENST00000573203 LDHAL6AQ6ZMR3 332 aa11.41□□□□□ -0.58
NDE1-207ENST00000573203 HELBQ8NG08 1087 aaPredicted RBP11.41□□□□□ -0.58
NDE1-207ENST00000573203 TRPM4Q8TD43 1214 aa11.41□□□□□ -0.58
NDE1-207ENST00000573203 ZNF594Q96JF6 807 aaPredicted RBP11.41□□□□□ -0.58
NDE1-207ENST00000573203 API5Q9BZZ5 524 aaKnown RBP11.41□□□□□ -0.58
NDE1-207ENST00000573203 BICC1Q9H694 974 aaKnown RBP11.41□□□□□ -0.58
NDE1-207ENST00000573203 CNNM1Q9NRU3 951 aa11.41□□□□□ -0.58
NDE1-207ENST00000573203 TRPM7Q96QT4 1865 aa11.4□□□□□ -0.58
NDE1-207ENST00000573203 USP17L3A6NCW0 530 aa11.4□□□□□ -0.58
NDE1-207ENST00000573203 USP17L4A6NCW7 530 aa11.4□□□□□ -0.58
NDE1-207ENST00000573203 PLIN1O60240 522 aa11.4□□□□□ -0.58
NDE1-207ENST00000573203 TAF5LO75529 589 aa11.4□□□□□ -0.58
NDE1-207ENST00000573203 BRPF1P55201 1214 aaPredicted RBP11.4□□□□□ -0.58
NDE1-207ENST00000573203 RSBN1LQ6PCB5 846 aaPredicted RBP11.4□□□□□ -0.58
NDE1-207ENST00000573203 USP17L1Q7RTZ2 530 aa11.4□□□□□ -0.58
NDE1-207ENST00000573203 FBXW7Q969H0 707 aa11.4□□□□□ -0.58
NDE1-207ENST00000573203 KAZALD1Q96I82 304 aa11.4□□□□□ -0.58
NDE1-207ENST00000573203 COA1Q9GZY4 146 aa11.4□□□□□ -0.58
NDE1-207ENST00000573203 USP44Q9H0E7 712 aa11.4□□□□□ -0.58
NDE1-207ENST00000573203 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
NDE1-207ENST00000573203 KIF16BQ96L93 1317 aa11.39□□□□□ -0.59
NDE1-207ENST00000573203 KLRK1P26718 216 aa11.39□□□□□ -0.59
NDE1-207ENST00000573203 HIRAP54198 1017 aaPredicted RBP11.39□□□□□ -0.59
NDE1-207ENST00000573203 TBC1D10BQ4KMP7 808 aaPredicted RBP11.39□□□□□ -0.59
NDE1-207ENST00000573203 RBM26Q5T8P6 1007 aaKnown RBP11.39□□□□□ -0.59
NDE1-207ENST00000573203 IER5LQ5T953 404 aa11.39□□□□□ -0.59
NDE1-207ENST00000573203 ERICH6BQ5W0A0 696 aa11.39□□□□□ -0.59
NDE1-207ENST00000573203 LHX8Q68G74 356 aa11.39□□□□□ -0.59
NDE1-207ENST00000573203 SAMD7Q7Z3H4 446 aa11.39□□□□□ -0.59
NDE1-207ENST00000573203 TXNRD3Q86VQ6 643 aa11.39□□□□□ -0.59
NDE1-207ENST00000573203 AGBL3Q8NEM8 1001 aa11.39□□□□□ -0.59
NDE1-207ENST00000573203 ZC3H15Q8WU90 426 aaKnown RBP11.39□□□□□ -0.59
NDE1-207ENST00000573203 TMEM106CQ9BVX2 250 aa11.39□□□□□ -0.59
NDE1-207ENST00000573203 POLR2AP24928 1970 aaKnown RBP11.38□□□□□ -0.59
NDE1-207ENST00000573203 SNAP23O00161 211 aa11.38□□□□□ -0.59
NDE1-207ENST00000573203 TRAF5O00463 557 aa11.38□□□□□ -0.59
NDE1-207ENST00000573203 KIF4BQ2VIQ3 1234 aa11.38□□□□□ -0.59
NDE1-207ENST00000573203 RABL6Q3YEC7 729 aaPredicted RBP11.38□□□□□ -0.59
NDE1-207ENST00000573203 ANKRD44Q8N8A2 993 aa11.38□□□□□ -0.59
NDE1-207ENST00000573203 MKRN1Q9UHC7 482 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms