RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 GMLQ99445 158 aa20.3■□□□□ 0.84
NDE1-205ENST00000572756 TRPM7Q96QT4 1865 aa20.3■□□□□ 0.84
NDE1-205ENST00000572756 USP17L3A6NCW0 530 aa20.29■□□□□ 0.84
NDE1-205ENST00000572756 USP17L4A6NCW7 530 aa20.29■□□□□ 0.84
NDE1-205ENST00000572756 INTS3Q68E01 1043 aaKnown RBP20.29■□□□□ 0.84
NDE1-205ENST00000572756 USP17L1Q7RTZ2 530 aa20.29■□□□□ 0.84
NDE1-205ENST00000572756 AGBL3Q8NEM8 1001 aa20.29■□□□□ 0.84
NDE1-205ENST00000572756 KLRG1Q96E93 195 aa20.29■□□□□ 0.84
NDE1-205ENST00000572756 PUS3Q9BZE2 481 aaKnown RBP20.29■□□□□ 0.84
NDE1-205ENST00000572756 CNNM1Q9NRU3 951 aa20.29■□□□□ 0.84
NDE1-205ENST00000572756 CREBZFQ9NS37 354 aa20.29■□□□□ 0.84
NDE1-205ENST00000572756 EGFRP00533 1210 aa20.28■□□□□ 0.84
NDE1-205ENST00000572756 KCNJ4P48050 445 aa20.28■□□□□ 0.84
NDE1-205ENST00000572756 ZC3H15Q8WU90 426 aaKnown RBP20.28■□□□□ 0.84
NDE1-205ENST00000572756 RIPOR2Q9Y4F9 1068 aa20.28■□□□□ 0.84
NDE1-205ENST00000572756 POLR2AP24928 1970 aaKnown RBP20.28■□□□□ 0.84
NDE1-205ENST00000572756 TRIM27P14373 513 aa20.27■□□□□ 0.84
NDE1-205ENST00000572756 SAMD7Q7Z3H4 446 aa20.27■□□□□ 0.84
NDE1-205ENST00000572756 IPO8O15397 1037 aaKnown RBP20.26■□□□□ 0.83
NDE1-205ENST00000572756 UBTFL1P0CB47 393 aaPredicted RBP20.26■□□□□ 0.83
NDE1-205ENST00000572756 RFX5P48382 616 aaPredicted RBP20.26■□□□□ 0.83
NDE1-205ENST00000572756 ZNF280AP59817 542 aaPredicted RBP20.26■□□□□ 0.83
NDE1-205ENST00000572756 DACT2Q5SW24 774 aa20.26■□□□□ 0.83
NDE1-205ENST00000572756 ATF7IPQ6VMQ6 1270 aa20.26■□□□□ 0.83
NDE1-205ENST00000572756 TNNQ9UQP3 1299 aa20.26■□□□□ 0.83
NDE1-205ENST00000572756 TMEM88BA6NKF7 163 aa20.25■□□□□ 0.83
NDE1-205ENST00000572756 TBC1D10BQ4KMP7 808 aaPredicted RBP20.25■□□□□ 0.83
NDE1-205ENST00000572756 LRRC24Q50LG9 513 aa20.25■□□□□ 0.83
NDE1-205ENST00000572756 STRIP1Q5VSL9 837 aa20.25■□□□□ 0.83
NDE1-205ENST00000572756 MEIS3Q99687 375 aa20.25■□□□□ 0.83
NDE1-205ENST00000572756 CD209Q9NNX6 404 aa20.25■□□□□ 0.83
NDE1-205ENST00000572756 MROH5Q6ZUA9 1318 aa20.25■□□□□ 0.83
NDE1-205ENST00000572756 PLIN1O60240 522 aa20.24■□□□□ 0.83
NDE1-205ENST00000572756 FMR1Q06787 632 aaKnown RBP eCLIP20.24■□□□□ 0.83
NDE1-205ENST00000572756 UBE4AQ14139 1066 aa20.24■□□□□ 0.83
NDE1-205ENST00000572756 JMYQ8N9B5 988 aa20.24■□□□□ 0.83
NDE1-205ENST00000572756 KLHDC4Q8TBB5 520 aa20.24■□□□□ 0.83
NDE1-205ENST00000572756 TRAF5O00463 557 aa20.23■□□□□ 0.83
NDE1-205ENST00000572756 KIF4BQ2VIQ3 1234 aa20.23■□□□□ 0.83
NDE1-205ENST00000572756 VGLL2Q8N8G2 317 aa20.23■□□□□ 0.83
NDE1-205ENST00000572756 FRAT1Q92837 279 aaPredicted RBP20.23■□□□□ 0.83
NDE1-205ENST00000572756 MXD3Q9BW11 206 aa20.23■□□□□ 0.83
NDE1-205ENST00000572756 PCNTO95613 3336 aa20.22■□□□□ 0.83
NDE1-205ENST00000572756 USP17L8P0C7I0 530 aa20.22■□□□□ 0.83
NDE1-205ENST00000572756 IL1R1P14778 569 aa20.22■□□□□ 0.83
NDE1-205ENST00000572756 PTPN12Q05209 780 aaKnown RBP20.22■□□□□ 0.83
NDE1-205ENST00000572756 TTLL5Q6EMB2 1281 aa20.22■□□□□ 0.83
NDE1-205ENST00000572756 GLIS2Q9BZE0 524 aaPredicted RBP20.22■□□□□ 0.83
NDE1-205ENST00000572756 LRRFIP2Q9Y608 721 aaKnown RBP20.22■□□□□ 0.83
NDE1-205ENST00000572756 MYO3BQ8WXR4 1341 aa20.22■□□□□ 0.83
NDE1-205ENST00000572756 RBM26Q5T8P6 1007 aaKnown RBP20.21■□□□□ 0.83
NDE1-205ENST00000572756 ZNF804AQ7Z570 1209 aa20.21■□□□□ 0.83
NDE1-205ENST00000572756 HDAC5Q9UQL6 1122 aa20.21■□□□□ 0.83
NDE1-205ENST00000572756 CNTNAP1P78357 1384 aa20.21■□□□□ 0.83
NDE1-205ENST00000572756 GNAI3P08754 354 aa20.2■□□□□ 0.82
NDE1-205ENST00000572756 GTF2IP78347 998 aa20.2■□□□□ 0.82
NDE1-205ENST00000572756 CST9Q5W186 159 aa20.2■□□□□ 0.82
NDE1-205ENST00000572756 ZKSCAN2Q63HK3 967 aa20.2■□□□□ 0.82
NDE1-205ENST00000572756 CDC37L1Q7L3B6 337 aa20.2■□□□□ 0.82
NDE1-205ENST00000572756 PDE8BO95263 885 aa20.19■□□□□ 0.82
NDE1-205ENST00000572756 METTL24Q5JXM2 366 aa20.19■□□□□ 0.82
NDE1-205ENST00000572756 FBXW7Q969H0 707 aa20.19■□□□□ 0.82
NDE1-205ENST00000572756 CLUAP1Q96AJ1 413 aa20.19■□□□□ 0.82
NDE1-205ENST00000572756 MYOZ2Q9NPC6 264 aa20.19■□□□□ 0.82
NDE1-205ENST00000572756 EYA2O00167 538 aa20.18■□□□□ 0.82
NDE1-205ENST00000572756 MMP14P50281 582 aa20.18■□□□□ 0.82
NDE1-205ENST00000572756 ATG9AQ7Z3C6 839 aa20.18■□□□□ 0.82
NDE1-205ENST00000572756 FAM84BQ96KN1 310 aaPredicted RBP20.18■□□□□ 0.82
NDE1-205ENST00000572756 MKRN1Q9UHC7 482 aaKnown RBP20.18■□□□□ 0.82
NDE1-205ENST00000572756 ASTN2O75129 1339 aaPredicted RBP20.18■□□□□ 0.82
NDE1-205ENST00000572756 ARAP2Q8WZ64 1704 aa20.17■□□□□ 0.82
NDE1-205ENST00000572756 RASSF10A6NK89 507 aa20.17■□□□□ 0.82
NDE1-205ENST00000572756 FGFR2P21802 821 aa20.17■□□□□ 0.82
NDE1-205ENST00000572756 GYG1P46976 350 aa20.17■□□□□ 0.82
NDE1-205ENST00000572756 USP48Q86UV5 1035 aa20.17■□□□□ 0.82
NDE1-205ENST00000572756 CERS5Q8N5B7 392 aa20.17■□□□□ 0.82
NDE1-205ENST00000572756 TMEM57Q8N5G2 664 aa20.17■□□□□ 0.82
NDE1-205ENST00000572756 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
NDE1-205ENST00000572756 GGA3Q9NZ52 723 aa20.17■□□□□ 0.82
NDE1-205ENST00000572756 FBXO3Q9UK99 471 aa20.17■□□□□ 0.82
NDE1-205ENST00000572756 CIAO1O76071 339 aa20.16■□□□□ 0.82
NDE1-205ENST00000572756 HIBADHP31937 336 aaKnown RBP20.16■□□□□ 0.82
NDE1-205ENST00000572756 FKBP1AP62942 108 aaKnown RBP20.16■□□□□ 0.82
NDE1-205ENST00000572756 MTX1Q13505 466 aa20.16■□□□□ 0.82
NDE1-205ENST00000572756 SCARF1Q14162 830 aa20.16■□□□□ 0.82
NDE1-205ENST00000572756 KRT26Q7Z3Y9 468 aa20.16■□□□□ 0.82
NDE1-205ENST00000572756 FBXO33Q7Z6M2 555 aa20.16■□□□□ 0.82
NDE1-205ENST00000572756 FAM205AQ6ZU69 1335 aa20.16■□□□□ 0.82
NDE1-205ENST00000572756 SASH1O94885 1247 aa20.15■□□□□ 0.82
NDE1-205ENST00000572756 DLK2Q6UY11 383 aa20.15■□□□□ 0.82
NDE1-205ENST00000572756 OGFOD1Q8N543 542 aa20.15■□□□□ 0.82
NDE1-205ENST00000572756 DCPSQ96C86 337 aaKnown RBP20.15■□□□□ 0.82
NDE1-205ENST00000572756 COPRSQ9NQ92 184 aa20.15■□□□□ 0.82
NDE1-205ENST00000572756 PITPNM2Q9BZ72 1349 aa20.14■□□□□ 0.81
NDE1-205ENST00000572756 CELF2O95319 508 aaKnown RBP20.14■□□□□ 0.81
NDE1-205ENST00000572756 RLBP1P12271 317 aa20.14■□□□□ 0.81
NDE1-205ENST00000572756 PUM3Q15397 648 aaKnown RBP20.14■□□□□ 0.81
NDE1-205ENST00000572756 KIAA0825Q8IV33 1275 aa20.14■□□□□ 0.81
NDE1-205ENST00000572756 ECM29Q5VYK3 1845 aa20.13■□□□□ 0.81
NDE1-205ENST00000572756 ADM5C9JUS6 153 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms