RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ZNF280AP59817 542 aaPredicted RBP19.1■□□□□ 0.65
RAB40B-203ENST00000570676 LMBR1LQ6UX01 489 aa19.1■□□□□ 0.65
RAB40B-203ENST00000570676 SSH1Q8WYL5 1049 aa19.1■□□□□ 0.65
RAB40B-203ENST00000570676 ARAP2Q8WZ64 1704 aa19.09■□□□□ 0.65
RAB40B-203ENST00000570676 UTYO14607 1347 aa19.09■□□□□ 0.65
RAB40B-203ENST00000570676 WDR33Q9C0J8 1336 aaKnown RBP19.09■□□□□ 0.65
RAB40B-203ENST00000570676 USP17L3A6NCW0 530 aa19.09■□□□□ 0.65
RAB40B-203ENST00000570676 USP17L4A6NCW7 530 aa19.09■□□□□ 0.65
RAB40B-203ENST00000570676 IFIT5Q13325 482 aaKnown RBP19.09■□□□□ 0.65
RAB40B-203ENST00000570676 USP17L1Q7RTZ2 530 aa19.09■□□□□ 0.65
RAB40B-203ENST00000570676 KAZALD1Q96I82 304 aa19.09■□□□□ 0.65
RAB40B-203ENST00000570676 COA1Q9GZY4 146 aa19.09■□□□□ 0.65
RAB40B-203ENST00000570676 CHMP3Q9Y3E7 222 aa19.09■□□□□ 0.65
RAB40B-203ENST00000570676 ASTN2O75129 1339 aaPredicted RBP19.08■□□□□ 0.65
RAB40B-203ENST00000570676 PTPRCP08575 1304 aa19.08■□□□□ 0.65
RAB40B-203ENST00000570676 PCNTO95613 3336 aa19.08■□□□□ 0.65
RAB40B-203ENST00000570676 DACT2Q5SW24 774 aa19.08■□□□□ 0.64
RAB40B-203ENST00000570676 RBM26Q5T8P6 1007 aaKnown RBP19.08■□□□□ 0.64
RAB40B-203ENST00000570676 DLK2Q6UY11 383 aa19.08■□□□□ 0.64
RAB40B-203ENST00000570676 SAPCD2Q86UD0 394 aa19.08■□□□□ 0.64
RAB40B-203ENST00000570676 USP48Q86UV5 1035 aa19.08■□□□□ 0.64
RAB40B-203ENST00000570676 SUCLG2Q96I99 432 aa19.08■□□□□ 0.64
RAB40B-203ENST00000570676 GGA3Q9NZ52 723 aa19.08■□□□□ 0.64
RAB40B-203ENST00000570676 C9orf78Q9NZ63 289 aaPredicted RBP19.08■□□□□ 0.64
RAB40B-203ENST00000570676 ECM29Q5VYK3 1845 aa19.07■□□□□ 0.64
RAB40B-203ENST00000570676 ADM5C9JUS6 153 aa19.07■□□□□ 0.64
RAB40B-203ENST00000570676 FOXN1O15353 648 aa19.07■□□□□ 0.64
RAB40B-203ENST00000570676 NBPF7P0C2Y1 421 aaPredicted RBP19.07■□□□□ 0.64
RAB40B-203ENST00000570676 KRT26Q7Z3Y9 468 aa19.07■□□□□ 0.64
RAB40B-203ENST00000570676 ZNF594Q96JF6 807 aaPredicted RBP19.07■□□□□ 0.64
RAB40B-203ENST00000570676 CAPNS2Q96L46 248 aa19.07■□□□□ 0.64
RAB40B-203ENST00000570676 SNAP23O00161 211 aa19.06■□□□□ 0.64
RAB40B-203ENST00000570676 CYP4F22Q6NT55 531 aa19.06■□□□□ 0.64
RAB40B-203ENST00000570676 MXD3Q9BW11 206 aa19.06■□□□□ 0.64
RAB40B-203ENST00000570676 ZNF408Q9H9D4 720 aa19.06■□□□□ 0.64
RAB40B-203ENST00000570676 WBP1LQ9NX94 342 aa19.06■□□□□ 0.64
RAB40B-203ENST00000570676 TAF5LO75529 589 aa19.05■□□□□ 0.64
RAB40B-203ENST00000570676 USP17L8P0C7I0 530 aa19.05■□□□□ 0.64
RAB40B-203ENST00000570676 ALDH1L2Q3SY69 923 aa19.05■□□□□ 0.64
RAB40B-203ENST00000570676 STRIP1Q5VSL9 837 aa19.05■□□□□ 0.64
RAB40B-203ENST00000570676 C15orf52Q6ZUT6 534 aaKnown RBP19.05■□□□□ 0.64
RAB40B-203ENST00000570676 HELBQ8NG08 1087 aaPredicted RBP19.05■□□□□ 0.64
RAB40B-203ENST00000570676 MYOZ2Q9NPC6 264 aa19.05■□□□□ 0.64
RAB40B-203ENST00000570676 MYO3BQ8WXR4 1341 aa19.04■□□□□ 0.64
RAB40B-203ENST00000570676 CT47B1P0C2W7 299 aaPredicted RBP19.04■□□□□ 0.64
RAB40B-203ENST00000570676 ECE1P42892 770 aa19.04■□□□□ 0.64
RAB40B-203ENST00000570676 KCNJ4P48050 445 aa19.04■□□□□ 0.64
RAB40B-203ENST00000570676 CCDC57Q2TAC2 916 aa19.04■□□□□ 0.64
RAB40B-203ENST00000570676 PAXIP1Q6ZW49 1069 aaPredicted RBP19.04■□□□□ 0.64
RAB40B-203ENST00000570676 DCPSQ96C86 337 aaKnown RBP19.04■□□□□ 0.64
RAB40B-203ENST00000570676 HHIPL1Q96JK4 782 aa19.04■□□□□ 0.64
RAB40B-203ENST00000570676 PAPPA2Q9BXP8 1791 aa19.04■□□□□ 0.64
RAB40B-203ENST00000570676 RABL6Q3YEC7 729 aaPredicted RBP19.03■□□□□ 0.64
RAB40B-203ENST00000570676 ANKRD44Q8N8A2 993 aa19.03■□□□□ 0.64
RAB40B-203ENST00000570676 FBXW7Q969H0 707 aa19.03■□□□□ 0.64
RAB40B-203ENST00000570676 SCARF1Q14162 830 aa19.02■□□□□ 0.64
RAB40B-203ENST00000570676 ANGEL2Q5VTE6 544 aaKnown RBP19.02■□□□□ 0.64
RAB40B-203ENST00000570676 LDHAL6AQ6ZMR3 332 aa19.02■□□□□ 0.64
RAB40B-203ENST00000570676 BICC1Q9H694 974 aaKnown RBP19.02■□□□□ 0.64
RAB40B-203ENST00000570676 CD209Q9NNX6 404 aa19.02■□□□□ 0.64
RAB40B-203ENST00000570676 PITPNM2Q9BZ72 1349 aa19.01■□□□□ 0.63
RAB40B-203ENST00000570676 GRM1Q13255 1194 aa19.01■□□□□ 0.63
RAB40B-203ENST00000570676 TAF7LQ5H9L4 462 aa19.01■□□□□ 0.63
RAB40B-203ENST00000570676 SULF1Q8IWU6 871 aa19.01■□□□□ 0.63
RAB40B-203ENST00000570676 CNNM1Q9NRU3 951 aa19.01■□□□□ 0.63
RAB40B-203ENST00000570676 SMC4Q9NTJ3 1288 aa19.01■□□□□ 0.63
RAB40B-203ENST00000570676 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
RAB40B-203ENST00000570676 AOC2O75106 756 aa19■□□□□ 0.63
RAB40B-203ENST00000570676 GTF2IP78347 998 aa19■□□□□ 0.63
RAB40B-203ENST00000570676 MAP2K1Q02750 393 aaPredicted RBP19■□□□□ 0.63
RAB40B-203ENST00000570676 TTLL5Q6EMB2 1281 aa19■□□□□ 0.63
RAB40B-203ENST00000570676 AIDAQ96BJ3 306 aa19■□□□□ 0.63
RAB40B-203ENST00000570676 CDCA5Q96FF9 252 aa19■□□□□ 0.63
RAB40B-203ENST00000570676 PUS3Q9BZE2 481 aaKnown RBP19■□□□□ 0.63
RAB40B-203ENST00000570676 GBA2Q9HCG7 927 aaPredicted RBP19■□□□□ 0.63
RAB40B-203ENST00000570676 IL1R1P14778 569 aa18.99■□□□□ 0.63
RAB40B-203ENST00000570676 CTCFP49711 727 aaPredicted RBP18.99■□□□□ 0.63
RAB40B-203ENST00000570676 HUNKP57058 714 aa18.99■□□□□ 0.63
RAB40B-203ENST00000570676 NBPF9Q3BBW0 867 aa18.99■□□□□ 0.63
RAB40B-203ENST00000570676 CERS5Q8N5B7 392 aa18.99■□□□□ 0.63
RAB40B-203ENST00000570676 USP44Q9H0E7 712 aa18.99■□□□□ 0.63
RAB40B-203ENST00000570676 WNT10BO00744 389 aa18.98■□□□□ 0.63
RAB40B-203ENST00000570676 HSPA8P11142 646 aaKnown RBP18.98■□□□□ 0.63
RAB40B-203ENST00000570676 ZNF804AQ7Z570 1209 aa18.98■□□□□ 0.63
RAB40B-203ENST00000570676 KIAA0825Q8IV33 1275 aa18.98■□□□□ 0.63
RAB40B-203ENST00000570676 TNS4Q8IZW8 715 aa18.98■□□□□ 0.63
RAB40B-203ENST00000570676 PRDM10Q9NQV6 1147 aa18.98■□□□□ 0.63
RAB40B-203ENST00000570676 MYH13Q9UKX3 1938 aa18.98■□□□□ 0.63
RAB40B-203ENST00000570676 PLIN1O60240 522 aa18.97■□□□□ 0.63
RAB40B-203ENST00000570676 SASH1O94885 1247 aa18.97■□□□□ 0.63
RAB40B-203ENST00000570676 MAP2K2P36507 400 aa18.97■□□□□ 0.63
RAB40B-203ENST00000570676 RARSP54136 660 aaKnown RBP18.97■□□□□ 0.63
RAB40B-203ENST00000570676 BRPF1P55201 1214 aaPredicted RBP18.97■□□□□ 0.63
RAB40B-203ENST00000570676 OGFOD1Q8N543 542 aa18.97■□□□□ 0.63
RAB40B-203ENST00000570676 ZBED3Q96IU2 234 aaPredicted RBP18.97■□□□□ 0.63
RAB40B-203ENST00000570676 RIPOR2Q9Y4F9 1068 aa18.97■□□□□ 0.63
RAB40B-203ENST00000570676 MMP14P50281 582 aa18.96■□□□□ 0.63
RAB40B-203ENST00000570676 SCAF8Q9UPN6 1271 aaKnown RBP18.96■□□□□ 0.63
RAB40B-203ENST00000570676 FAM155AB1AL88 458 aaPredicted RBP18.95■□□□□ 0.62
RAB40B-203ENST00000570676 LBX1P52954 281 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms