RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 BEND3Q5T5X7 828 aa11.31□□□□□ -0.6
NPLOC4-204ENST00000570324 SAPCD2Q86UD0 394 aa11.31□□□□□ -0.6
NPLOC4-204ENST00000570324 SRCIN1Q9C0H9 1055 aa11.31□□□□□ -0.6
NPLOC4-204ENST00000570324 COA1Q9GZY4 146 aa11.31□□□□□ -0.6
NPLOC4-204ENST00000570324 ADM5C9JUS6 153 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 E9PSI1 815 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 GRM8O00222 908 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 ALDH1L1O75891 902 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 EGFRP00533 1210 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 MAP2K2P36507 400 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 LBX1P52954 281 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 HUNKP57058 714 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 CHRNDQ07001 517 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 SCARF1Q14162 830 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 GBA2Q9HCG7 927 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 MYOZ2Q9NPC6 264 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 PRDM10Q9NQV6 1147 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 CNNM1Q9NRU3 951 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 GGA3Q9NZ52 723 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 SCN9AQ15858 1988 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
NPLOC4-204ENST00000570324 WTIPA6NIX2 430 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-204ENST00000570324 PLIN1O60240 522 aa11.29□□□□□ -0.6
NPLOC4-204ENST00000570324 AOC2O75106 756 aa11.29□□□□□ -0.6
NPLOC4-204ENST00000570324 ZNF280AP59817 542 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-204ENST00000570324 STRIP1Q5VSL9 837 aa11.29□□□□□ -0.6
NPLOC4-204ENST00000570324 ANGEL2Q5VTE6 544 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-204ENST00000570324 LMBR1LQ6UX01 489 aa11.29□□□□□ -0.6
NPLOC4-204ENST00000570324 HHIPL1Q96JK4 782 aa11.29□□□□□ -0.6
NPLOC4-204ENST00000570324 HDAC9Q9UKV0 1011 aa11.29□□□□□ -0.6
NPLOC4-204ENST00000570324 TAF5LO75529 589 aa11.28□□□□□ -0.6
NPLOC4-204ENST00000570324 FOXO4P98177 505 aa11.28□□□□□ -0.6
NPLOC4-204ENST00000570324 TTLL5Q6EMB2 1281 aa11.28□□□□□ -0.6
NPLOC4-204ENST00000570324 DLK2Q6UY11 383 aa11.28□□□□□ -0.6
NPLOC4-204ENST00000570324 LDHAL6AQ6ZMR3 332 aa11.28□□□□□ -0.6
NPLOC4-204ENST00000570324 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-204ENST00000570324 POLR2AP24928 1970 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-204ENST00000570324 PSME4Q14997 1843 aa11.28□□□□□ -0.6
NPLOC4-204ENST00000570324 HSPA8P11142 646 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-204ENST00000570324 GTF2IP78347 998 aa11.27□□□□□ -0.61
NPLOC4-204ENST00000570324 NOGQ13253 232 aa11.27□□□□□ -0.61
NPLOC4-204ENST00000570324 DACT2Q5SW24 774 aa11.27□□□□□ -0.61
NPLOC4-204ENST00000570324 RGMBQ6NW40 437 aa11.27□□□□□ -0.61
NPLOC4-204ENST00000570324 ZNF804AQ7Z570 1209 aa11.27□□□□□ -0.61
NPLOC4-204ENST00000570324 TXNRD3Q86VQ6 643 aa11.27□□□□□ -0.61
NPLOC4-204ENST00000570324 GMLQ99445 158 aa11.27□□□□□ -0.61
NPLOC4-204ENST00000570324 MXD3Q9BW11 206 aa11.27□□□□□ -0.61
NPLOC4-204ENST00000570324 ASTN2O75129 1339 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-204ENST00000570324 ZNF609O15014 1411 aa11.26□□□□□ -0.61
NPLOC4-204ENST00000570324 MMP14P50281 582 aa11.26□□□□□ -0.61
NPLOC4-204ENST00000570324 ZNF157P51786 506 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-204ENST00000570324 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-204ENST00000570324 EPHA10Q5JZY3 1008 aa11.26□□□□□ -0.61
NPLOC4-204ENST00000570324 KIAA0825Q8IV33 1275 aa11.26□□□□□ -0.61
NPLOC4-204ENST00000570324 MRPL50Q8N5N7 158 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-204ENST00000570324 CCDC102AQ96A19 550 aa11.26□□□□□ -0.61
NPLOC4-204ENST00000570324 CDCA5Q96FF9 252 aa11.26□□□□□ -0.61
NPLOC4-204ENST00000570324 ZNF594Q96JF6 807 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-204ENST00000570324 ZNF521Q96K83 1311 aa11.26□□□□□ -0.61
NPLOC4-204ENST00000570324 CA12O43570 354 aa11.25□□□□□ -0.61
NPLOC4-204ENST00000570324 KLRK1P26718 216 aa11.25□□□□□ -0.61
NPLOC4-204ENST00000570324 NF2P35240 595 aa11.25□□□□□ -0.61
NPLOC4-204ENST00000570324 BRPF1P55201 1214 aaPredicted RBP11.25□□□□□ -0.61
NPLOC4-204ENST00000570324 SLFN5Q08AF3 891 aa11.25□□□□□ -0.61
NPLOC4-204ENST00000570324 NBPF9Q3BBW0 867 aa11.25□□□□□ -0.61
NPLOC4-204ENST00000570324 CD209Q9NNX6 404 aa11.25□□□□□ -0.61
NPLOC4-204ENST00000570324 PTPRCP08575 1304 aa11.25□□□□□ -0.61
NPLOC4-204ENST00000570324 PITPNM2Q9BZ72 1349 aa11.25□□□□□ -0.61
NPLOC4-204ENST00000570324 SNAP23O00161 211 aa11.24□□□□□ -0.61
NPLOC4-204ENST00000570324 SSH1Q8WYL5 1049 aa11.24□□□□□ -0.61
NPLOC4-204ENST00000570324 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
NPLOC4-204ENST00000570324 TSKSQ9UJT2 592 aa11.24□□□□□ -0.61
NPLOC4-204ENST00000570324 THSD7BQ9C0I4 1608 aa11.24□□□□□ -0.61
NPLOC4-204ENST00000570324 F8W031 263 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-204ENST00000570324 WNT10BO00744 389 aa11.23□□□□□ -0.61
NPLOC4-204ENST00000570324 SASH1O94885 1247 aa11.23□□□□□ -0.61
NPLOC4-204ENST00000570324 NBPF7P0C2Y1 421 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-204ENST00000570324 FKBP1BP68106 108 aa11.23□□□□□ -0.61
NPLOC4-204ENST00000570324 DLGAP5Q15398 846 aa11.23□□□□□ -0.61
NPLOC4-204ENST00000570324 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
NPLOC4-204ENST00000570324 C15orf52Q6ZUT6 534 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-204ENST00000570324 APOBEC3FQ8IUX4 373 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-204ENST00000570324 SMC4Q9NTJ3 1288 aa11.23□□□□□ -0.61
NPLOC4-204ENST00000570324 SCAF8Q9UPN6 1271 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-204ENST00000570324 CCER2I3L3R5 266 aa11.22□□□□□ -0.61
NPLOC4-204ENST00000570324 MYO1BO43795 1136 aa11.22□□□□□ -0.61
NPLOC4-204ENST00000570324 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
NPLOC4-204ENST00000570324 KIF23Q02241 960 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-204ENST00000570324 UBE4AQ14139 1066 aa11.22□□□□□ -0.61
NPLOC4-204ENST00000570324 PRAMEF18Q5VWM3 479 aa11.22□□□□□ -0.61
NPLOC4-204ENST00000570324 VPS37DQ86XT2 251 aa11.22□□□□□ -0.61
NPLOC4-204ENST00000570324 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
NPLOC4-204ENST00000570324 BICC1Q9H694 974 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-204ENST00000570324 UTYO14607 1347 aa11.21□□□□□ -0.61
NPLOC4-204ENST00000570324 MROH5Q6ZUA9 1318 aa11.21□□□□□ -0.61
NPLOC4-204ENST00000570324 FRAT2O75474 233 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-204ENST00000570324 IL1R1P14778 569 aa11.21□□□□□ -0.61
NPLOC4-204ENST00000570324 HIBADHP31937 336 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-204ENST00000570324 METTL24Q5JXM2 366 aa11.21□□□□□ -0.61
NPLOC4-204ENST00000570324 PUS3Q9BZE2 481 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms