RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 FAM8A1Q9UBU6 413 aa9.73□□□□□ -0.85
CNOT1-222ENST00000570139 FNDC3AQ9Y2H6 1198 aaKnown RBP9.73□□□□□ -0.85
CNOT1-222ENST00000570139 GPC6Q9Y625 555 aaPredicted RBP9.73□□□□□ -0.85
CNOT1-222ENST00000570139 MROH2AA6NES4 1674 aa9.73□□□□□ -0.85
CNOT1-222ENST00000570139 PLA2R1Q13018 1463 aa9.72□□□□□ -0.85
CNOT1-222ENST00000570139 MICAL2O94851 1124 aa9.72□□□□□ -0.85
CNOT1-222ENST00000570139 RACK1P63244 317 aaKnown RBP9.72□□□□□ -0.85
CNOT1-222ENST00000570139 TAF1CQ15572 869 aaPredicted RBP9.72□□□□□ -0.85
CNOT1-222ENST00000570139 NBPF1Q3BBV0 1214 aa9.72□□□□□ -0.85
CNOT1-222ENST00000570139 IER5Q5VY09 327 aa9.72□□□□□ -0.85
CNOT1-222ENST00000570139 NBPF10Q6P3W6 841 aaKnown RBP9.72□□□□□ -0.85
CNOT1-222ENST00000570139 KDF1Q8NAX2 398 aaPredicted RBP9.72□□□□□ -0.85
CNOT1-222ENST00000570139 RHPN1Q8TCX5 695 aa9.72□□□□□ -0.85
CNOT1-222ENST00000570139 USP31Q70CQ4 1352 aa9.72□□□□□ -0.85
CNOT1-222ENST00000570139 CLTCL1P53675 1640 aa9.71□□□□□ -0.85
CNOT1-222ENST00000570139 STK10O94804 968 aaKnown RBP9.71□□□□□ -0.86
CNOT1-222ENST00000570139 NNTQ13423 1086 aa9.71□□□□□ -0.86
CNOT1-222ENST00000570139 XKR5Q6UX68 686 aa9.71□□□□□ -0.86
CNOT1-222ENST00000570139 Q6ZVU0 165 aa9.71□□□□□ -0.86
CNOT1-222ENST00000570139 CCDC74AQ96AQ1 378 aa9.71□□□□□ -0.86
CNOT1-222ENST00000570139 MRGPRX2Q96LB1 330 aa9.71□□□□□ -0.86
CNOT1-222ENST00000570139 SRA1Q9HD15 236 aaKnown RBP9.71□□□□□ -0.86
CNOT1-222ENST00000570139 WASHC2CQ9Y4E1 1318 aa9.71□□□□□ -0.86
CNOT1-222ENST00000570139 NPATQ14207 1427 aa9.71□□□□□ -0.86
CNOT1-222ENST00000570139 UHRF1BP1Q6BDS2 1440 aa9.71□□□□□ -0.86
CNOT1-222ENST00000570139 PIK3C2BO00750 1634 aa9.71□□□□□ -0.86
CNOT1-222ENST00000570139 PREX1Q8TCU6 1659 aa9.71□□□□□ -0.86
CNOT1-222ENST00000570139 TLDC2A0PJX2 215 aa9.7□□□□□ -0.86
CNOT1-222ENST00000570139 GJA8P48165 433 aa9.7□□□□□ -0.86
CNOT1-222ENST00000570139 PDE12Q6L8Q7 609 aaKnown RBP9.7□□□□□ -0.86
CNOT1-222ENST00000570139 PPP1R18Q6NYC8 613 aa9.7□□□□□ -0.86
CNOT1-222ENST00000570139 PMFBP1Q8TBY8 1022 aa9.7□□□□□ -0.86
CNOT1-222ENST00000570139 ZDHHC3Q9NYG2 299 aa9.7□□□□□ -0.86
CNOT1-222ENST00000570139 WASF2Q9Y6W5 498 aa9.7□□□□□ -0.86
CNOT1-222ENST00000570139 CLTCQ00610 1675 aaKnown RBP9.7□□□□□ -0.86
CNOT1-222ENST00000570139 A6NHS1 94 aa9.69□□□□□ -0.86
CNOT1-222ENST00000570139 TNFRSF21O75509 655 aa9.69□□□□□ -0.86
CNOT1-222ENST00000570139 LAMC1P11047 1609 aa9.69□□□□□ -0.86
CNOT1-222ENST00000570139 GPC1P35052 558 aa9.69□□□□□ -0.86
CNOT1-222ENST00000570139 TXLNAP40222 546 aa9.69□□□□□ -0.86
CNOT1-222ENST00000570139 CBLBQ13191 982 aa9.69□□□□□ -0.86
CNOT1-222ENST00000570139 GGT6Q6P531 493 aa9.69□□□□□ -0.86
CNOT1-222ENST00000570139 ZNF438Q7Z4V0 828 aa9.69□□□□□ -0.86
CNOT1-222ENST00000570139 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.69□□□□□ -0.86
CNOT1-222ENST00000570139 SIGLEC1Q9BZZ2 1709 aa9.69□□□□□ -0.86
CNOT1-222ENST00000570139 BCS1LQ9Y276 419 aa9.69□□□□□ -0.86
CNOT1-222ENST00000570139 ADGRB3O60242 1522 aa9.68□□□□□ -0.86
CNOT1-222ENST00000570139 NOS1P29475 1434 aa9.68□□□□□ -0.86
CNOT1-222ENST00000570139 SPATA31E1Q6ZUB1 1445 aa9.68□□□□□ -0.86
CNOT1-222ENST00000570139 OSBPL7Q9BZF2 842 aa9.68□□□□□ -0.86
CNOT1-222ENST00000570139 ZSWIM4Q9H7M6 989 aa9.68□□□□□ -0.86
CNOT1-222ENST00000570139 ANKIB1Q9P2G1 1089 aa9.68□□□□□ -0.86
CNOT1-222ENST00000570139 IFT172Q9UG01 1749 aa9.68□□□□□ -0.86
CNOT1-222ENST00000570139 RALGAPBQ86X10 1494 aa9.67□□□□□ -0.86
CNOT1-222ENST00000570139 ALDH1A1P00352 501 aa9.67□□□□□ -0.86
CNOT1-222ENST00000570139 FGRP09769 529 aa9.67□□□□□ -0.86
CNOT1-222ENST00000570139 TATP17735 454 aaPredicted RBP9.67□□□□□ -0.86
CNOT1-222ENST00000570139 PLA2G4AP47712 749 aa9.67□□□□□ -0.86
CNOT1-222ENST00000570139 ARSDP51689 593 aa9.67□□□□□ -0.86
CNOT1-222ENST00000570139 SLC27A3Q5K4L6 730 aa9.67□□□□□ -0.86
CNOT1-222ENST00000570139 MCF2L2Q86YR7 1114 aa9.67□□□□□ -0.86
CNOT1-222ENST00000570139 KIAA1210Q9ULL0 1709 aa9.67□□□□□ -0.86
CNOT1-222ENST00000570139 KDM5AP29375 1690 aaKnown RBP9.67□□□□□ -0.86
CNOT1-222ENST00000570139 SPATA31D1Q6ZQQ2 1576 aa9.67□□□□□ -0.86
CNOT1-222ENST00000570139 MYOM2P54296 1465 aa9.66□□□□□ -0.86
CNOT1-222ENST00000570139 PHACTR2O75167 634 aa9.66□□□□□ -0.86
CNOT1-222ENST00000570139 USP17L7P0C7H9 530 aa9.66□□□□□ -0.86
CNOT1-222ENST00000570139 IDH3AP50213 366 aa9.66□□□□□ -0.86
CNOT1-222ENST00000570139 RELBQ01201 579 aa9.66□□□□□ -0.86
CNOT1-222ENST00000570139 MEI1Q5TIA1 1274 aa9.66□□□□□ -0.86
CNOT1-222ENST00000570139 EPS8L3Q8TE67 593 aaKnown RBP9.66□□□□□ -0.86
CNOT1-222ENST00000570139 GPRASP2Q96D09 838 aa9.66□□□□□ -0.86
CNOT1-222ENST00000570139 OSBPL2Q9H1P3 480 aa9.66□□□□□ -0.86
CNOT1-222ENST00000570139 ZFYVE28Q9HCC9 887 aa9.66□□□□□ -0.86
CNOT1-222ENST00000570139 FOXD3Q9UJU5 478 aaPredicted RBP9.66□□□□□ -0.86
CNOT1-222ENST00000570139 TRPM1Q7Z4N2 1603 aa9.66□□□□□ -0.86
CNOT1-222ENST00000570139 SYNMO15061 1565 aa9.66□□□□□ -0.86
CNOT1-222ENST00000570139 ATF4P18848 351 aaPredicted RBP9.65□□□□□ -0.86
CNOT1-222ENST00000570139 LIAT1Q6ZQX7 453 aa9.65□□□□□ -0.86
CNOT1-222ENST00000570139 SUSD3Q96L08 255 aa9.65□□□□□ -0.86
CNOT1-222ENST00000570139 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
CNOT1-222ENST00000570139 FER1L4A9Z1Z3 1794 aa9.65□□□□□ -0.87
CNOT1-222ENST00000570139 ERVK-7P63135 1459 aa9.65□□□□□ -0.87
CNOT1-222ENST00000570139 MADDQ8WXG6 1647 aa9.64□□□□□ -0.87
CNOT1-222ENST00000570139 UBAP1LF5GYI3 381 aa9.64□□□□□ -0.87
CNOT1-222ENST00000570139 ZIC2O95409 532 aaPredicted RBP9.64□□□□□ -0.87
CNOT1-222ENST00000570139 PAK2Q13177 524 aa9.64□□□□□ -0.87
CNOT1-222ENST00000570139 USPL1Q5W0Q7 1092 aa9.64□□□□□ -0.87
CNOT1-222ENST00000570139 SDE2Q6IQ49 451 aa9.64□□□□□ -0.87
CNOT1-222ENST00000570139 PI16Q6UXB8 463 aa9.64□□□□□ -0.87
CNOT1-222ENST00000570139 ERMP1Q7Z2K6 904 aa9.64□□□□□ -0.87
CNOT1-222ENST00000570139 AIDAQ96BJ3 306 aa9.64□□□□□ -0.87
CNOT1-222ENST00000570139 ITPKCQ96DU7 683 aa9.64□□□□□ -0.87
CNOT1-222ENST00000570139 SLC52A1Q9NWF4 448 aa9.64□□□□□ -0.87
CNOT1-222ENST00000570139 DMGDHQ9UI17 866 aaKnown RBP9.64□□□□□ -0.87
CNOT1-222ENST00000570139 PRAG1Q86YV5 1406 aa9.64□□□□□ -0.87
CNOT1-222ENST00000570139 PPLO60437 1756 aa9.63□□□□□ -0.87
CNOT1-222ENST00000570139 POLR1AO95602 1720 aaPredicted RBP9.63□□□□□ -0.87
CNOT1-222ENST00000570139 EPB42P16452 691 aa9.63□□□□□ -0.87
CNOT1-222ENST00000570139 IRS1P35568 1242 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms