RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 LDHAL6AQ6ZMR3 332 aa25.4■■□□□ 1.66
ABCA3-206ENST00000569062 USP17L1Q7RTZ2 530 aa25.4■■□□□ 1.66
ABCA3-206ENST00000569062 ZC3H15Q8WU90 426 aaKnown RBP25.4■■□□□ 1.66
ABCA3-206ENST00000569062 GLIS2Q9BZE0 524 aaPredicted RBP25.4■■□□□ 1.66
ABCA3-206ENST00000569062 USP44Q9H0E7 712 aa25.4■■□□□ 1.66
ABCA3-206ENST00000569062 ZNF609O15014 1411 aa25.39■■□□□ 1.66
ABCA3-206ENST00000569062 KCNJ4P48050 445 aa25.39■■□□□ 1.66
ABCA3-206ENST00000569062 RARSP54136 660 aaKnown RBP25.39■■□□□ 1.66
ABCA3-206ENST00000569062 COA1Q9GZY4 146 aa25.39■■□□□ 1.66
ABCA3-206ENST00000569062 CNTNAP1P78357 1384 aa25.39■■□□□ 1.65
ABCA3-206ENST00000569062 BRPF1P55201 1214 aaPredicted RBP25.38■■□□□ 1.65
ABCA3-206ENST00000569062 HNRNPUQ00839 825 aaKnown RBP eCLIP25.38■■□□□ 1.65
ABCA3-206ENST00000569062 RABL6Q3YEC7 729 aaPredicted RBP25.38■■□□□ 1.65
ABCA3-206ENST00000569062 ANKRD44Q8N8A2 993 aa25.38■■□□□ 1.65
ABCA3-206ENST00000569062 AGBL3Q8NEM8 1001 aa25.38■■□□□ 1.65
ABCA3-206ENST00000569062 CNNM1Q9NRU3 951 aa25.38■■□□□ 1.65
ABCA3-206ENST00000569062 IRS2Q9Y4H2 1338 aa25.37■■□□□ 1.65
ABCA3-206ENST00000569062 CST9Q5W186 159 aa25.37■■□□□ 1.65
ABCA3-206ENST00000569062 GMLQ99445 158 aa25.37■■□□□ 1.65
ABCA3-206ENST00000569062 MXD3Q9BW11 206 aa25.37■■□□□ 1.65
ABCA3-206ENST00000569062 PLIN1O60240 522 aa25.36■■□□□ 1.65
ABCA3-206ENST00000569062 KIF4BQ2VIQ3 1234 aa25.36■■□□□ 1.65
ABCA3-206ENST00000569062 FBXW7Q969H0 707 aa25.36■■□□□ 1.65
ABCA3-206ENST00000569062 PUS3Q9BZE2 481 aaKnown RBP25.36■■□□□ 1.65
ABCA3-206ENST00000569062 DACT2Q5SW24 774 aa25.35■■□□□ 1.65
ABCA3-206ENST00000569062 ZNF280AP59817 542 aaPredicted RBP25.34■■□□□ 1.65
ABCA3-206ENST00000569062 CDC37L1Q7L3B6 337 aa25.34■■□□□ 1.65
ABCA3-206ENST00000569062 ABT1Q9ULW3 272 aaKnown RBP25.34■■□□□ 1.65
ABCA3-206ENST00000569062 RASSF10A6NK89 507 aa25.33■■□□□ 1.65
ABCA3-206ENST00000569062 USP17L8P0C7I0 530 aa25.33■■□□□ 1.65
ABCA3-206ENST00000569062 STRIP1Q5VSL9 837 aa25.33■■□□□ 1.65
ABCA3-206ENST00000569062 DLK2Q6UY11 383 aa25.33■■□□□ 1.65
ABCA3-206ENST00000569062 C15orf52Q6ZUT6 534 aaKnown RBP25.33■■□□□ 1.65
ABCA3-206ENST00000569062 USP48Q86UV5 1035 aa25.33■■□□□ 1.65
ABCA3-206ENST00000569062 API5Q9BZZ5 524 aaKnown RBP25.33■■□□□ 1.65
ABCA3-206ENST00000569062 CD209Q9NNX6 404 aa25.33■■□□□ 1.65
ABCA3-206ENST00000569062 VEGFBP49765 207 aa25.32■■□□□ 1.64
ABCA3-206ENST00000569062 DEFB115Q30KQ5 88 aa25.32■■□□□ 1.64
ABCA3-206ENST00000569062 ASTN2O75129 1339 aaPredicted RBP25.32■■□□□ 1.64
ABCA3-206ENST00000569062 CELF2O95319 508 aaKnown RBP25.31■■□□□ 1.64
ABCA3-206ENST00000569062 TTLL5Q6EMB2 1281 aa25.31■■□□□ 1.64
ABCA3-206ENST00000569062 MYOZ2Q9NPC6 264 aa25.31■■□□□ 1.64
ABCA3-206ENST00000569062 RIPOR2Q9Y4F9 1068 aa25.31■■□□□ 1.64
ABCA3-206ENST00000569062 GTF2IP78347 998 aa25.3■■□□□ 1.64
ABCA3-206ENST00000569062 LRRC24Q50LG9 513 aa25.3■■□□□ 1.64
ABCA3-206ENST00000569062 KLHDC4Q8TBB5 520 aa25.3■■□□□ 1.64
ABCA3-206ENST00000569062 DCPSQ96C86 337 aaKnown RBP25.3■■□□□ 1.64
ABCA3-206ENST00000569062 ZNF408Q9H9D4 720 aa25.3■■□□□ 1.64
ABCA3-206ENST00000569062 KIF16BQ96L93 1317 aa25.3■■□□□ 1.64
ABCA3-206ENST00000569062 KRT26Q7Z3Y9 468 aa25.29■■□□□ 1.64
ABCA3-206ENST00000569062 GGA3Q9NZ52 723 aa25.29■■□□□ 1.64
ABCA3-206ENST00000569062 MYO3BQ8WXR4 1341 aa25.29■■□□□ 1.64
ABCA3-206ENST00000569062 ADM5C9JUS6 153 aa25.28■■□□□ 1.64
ABCA3-206ENST00000569062 BCAR3O75815 825 aa25.28■■□□□ 1.64
ABCA3-206ENST00000569062 HSPA1AP0DMV8 641 aaKnown RBP25.28■■□□□ 1.64
ABCA3-206ENST00000569062 HSPA1BP0DMV9 641 aaKnown RBP25.28■■□□□ 1.64
ABCA3-206ENST00000569062 SCARF1Q14162 830 aa25.28■■□□□ 1.64
ABCA3-206ENST00000569062 ZNF804AQ7Z570 1209 aa25.28■■□□□ 1.64
ABCA3-206ENST00000569062 TLL2Q9Y6L7 1015 aa25.28■■□□□ 1.64
ABCA3-206ENST00000569062 IL1R1P14778 569 aa25.27■■□□□ 1.64
ABCA3-206ENST00000569062 UBE4AQ14139 1066 aa25.27■■□□□ 1.64
ABCA3-206ENST00000569062 ARHGAP45Q92619 1136 aa25.27■■□□□ 1.64
ABCA3-206ENST00000569062 MROH5Q6ZUA9 1318 aa25.27■■□□□ 1.64
ABCA3-206ENST00000569062 UBTFL1P0CB47 393 aaPredicted RBP25.26■■□□□ 1.63
ABCA3-206ENST00000569062 ANGEL2Q5VTE6 544 aaKnown RBP25.26■■□□□ 1.63
ABCA3-206ENST00000569062 RFX5P48382 616 aaPredicted RBP25.25■■□□□ 1.63
ABCA3-206ENST00000569062 SAPCD2Q86UD0 394 aa25.25■■□□□ 1.63
ABCA3-206ENST00000569062 KIAA0825Q8IV33 1275 aa25.25■■□□□ 1.63
ABCA3-206ENST00000569062 OGFOD1Q8N543 542 aa25.25■■□□□ 1.63
ABCA3-206ENST00000569062 TNNQ9UQP3 1299 aa25.25■■□□□ 1.63
ABCA3-206ENST00000569062 WDR33Q9C0J8 1336 aaKnown RBP25.25■■□□□ 1.63
ABCA3-206ENST00000569062 NBPF9Q3BBW0 867 aa25.24■■□□□ 1.63
ABCA3-206ENST00000569062 METTL24Q5JXM2 366 aa25.24■■□□□ 1.63
ABCA3-206ENST00000569062 PAXIP1Q6ZW49 1069 aaPredicted RBP25.24■■□□□ 1.63
ABCA3-206ENST00000569062 FRAT1Q92837 279 aaPredicted RBP25.24■■□□□ 1.63
ABCA3-206ENST00000569062 MEIS3Q99687 375 aa25.24■■□□□ 1.63
ABCA3-206ENST00000569062 JAG2Q9Y219 1238 aa25.24■■□□□ 1.63
ABCA3-206ENST00000569062 GYG1P46976 350 aa25.23■■□□□ 1.63
ABCA3-206ENST00000569062 INTS3Q68E01 1043 aaKnown RBP25.23■■□□□ 1.63
ABCA3-206ENST00000569062 CYP4F22Q6NT55 531 aa25.23■■□□□ 1.63
ABCA3-206ENST00000569062 SULF1Q8IWU6 871 aa25.23■■□□□ 1.63
ABCA3-206ENST00000569062 CERS5Q8N5B7 392 aa25.23■■□□□ 1.63
ABCA3-206ENST00000569062 VGLL2Q8N8G2 317 aa25.23■■□□□ 1.63
ABCA3-206ENST00000569062 LRRFIP2Q9Y608 721 aaKnown RBP25.23■■□□□ 1.63
ABCA3-206ENST00000569062 TRIM27P14373 513 aa25.22■■□□□ 1.63
ABCA3-206ENST00000569062 PTPN12Q05209 780 aaKnown RBP25.22■■□□□ 1.63
ABCA3-206ENST00000569062 FAM84BQ96KN1 310 aaPredicted RBP25.22■■□□□ 1.63
ABCA3-206ENST00000569062 SCAF8Q9UPN6 1271 aaKnown RBP25.22■■□□□ 1.63
ABCA3-206ENST00000569062 ZBED9Q6R2W3 1325 aa25.21■■□□□ 1.63
ABCA3-206ENST00000569062 WNT10BO00744 389 aa25.21■■□□□ 1.63
ABCA3-206ENST00000569062 IPO8O15397 1037 aaKnown RBP25.21■■□□□ 1.63
ABCA3-206ENST00000569062 PDE8BO95263 885 aa25.21■■□□□ 1.63
ABCA3-206ENST00000569062 GRM1Q13255 1194 aa25.21■■□□□ 1.63
ABCA3-206ENST00000569062 CAPNS2Q96L46 248 aa25.21■■□□□ 1.63
ABCA3-206ENST00000569062 THSD7BQ9C0I4 1608 aa25.2■■□□□ 1.62
ABCA3-206ENST00000569062 HIBADHP31937 336 aaKnown RBP25.2■■□□□ 1.62
ABCA3-206ENST00000569062 ATF7IPQ6VMQ6 1270 aa25.2■■□□□ 1.62
ABCA3-206ENST00000569062 TDRD7Q8NHU6 1098 aaKnown RBP25.2■■□□□ 1.62
ABCA3-206ENST00000569062 HDAC9Q9UKV0 1011 aa25.2■■□□□ 1.62
ABCA3-206ENST00000569062 PITPNM2Q9BZ72 1349 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms