RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 HSP90AB4PQ58FF6 505 aa22.25■■□□□ 1.15
COMMD4-222ENST00000568034 ZC3H12CQ9C0D7 883 aaKnown RBP22.25■■□□□ 1.15
COMMD4-222ENST00000568034 IGHDP01880 384 aa22.24■■□□□ 1.15
COMMD4-222ENST00000568034 ERC1Q8IUD2 1116 aa22.24■■□□□ 1.15
COMMD4-222ENST00000568034 RHPN1Q8TCX5 695 aa22.24■■□□□ 1.15
COMMD4-222ENST00000568034 LPIN2Q92539 896 aa22.24■■□□□ 1.15
COMMD4-222ENST00000568034 GPR108Q9NPR9 543 aa22.24■■□□□ 1.15
COMMD4-222ENST00000568034 YDJCA8MPS7 323 aa22.23■■□□□ 1.15
COMMD4-222ENST00000568034 RAB11FIP3O75154 756 aa22.23■■□□□ 1.15
COMMD4-222ENST00000568034 DBNDD1Q9H9R9 158 aa22.23■■□□□ 1.15
COMMD4-222ENST00000568034 SCN9AQ15858 1988 aa22.22■■□□□ 1.15
COMMD4-222ENST00000568034 A0A1B0GUL7 405 aa22.22■■□□□ 1.15
COMMD4-222ENST00000568034 SLC5A1P13866 664 aa22.22■■□□□ 1.15
COMMD4-222ENST00000568034 ADORA1P30542 326 aa22.22■■□□□ 1.15
COMMD4-222ENST00000568034 DOK7Q18PE1 504 aa22.22■■□□□ 1.15
COMMD4-222ENST00000568034 TNNI3KQ59H18 835 aa22.22■■□□□ 1.15
COMMD4-222ENST00000568034 KIF1BPQ96EK5 621 aa22.22■■□□□ 1.15
COMMD4-222ENST00000568034 FAM84BQ96KN1 310 aaPredicted RBP22.22■■□□□ 1.15
COMMD4-222ENST00000568034 FPGT-TNNI3KV9GXZ4 949 aa22.22■■□□□ 1.15
COMMD4-222ENST00000568034 FZD9O00144 591 aa22.21■■□□□ 1.15
COMMD4-222ENST00000568034 APBB1O00213 710 aa22.21■■□□□ 1.15
COMMD4-222ENST00000568034 ECE2O60344 883 aa22.21■■□□□ 1.15
COMMD4-222ENST00000568034 NEFLP07196 543 aa22.21■■□□□ 1.15
COMMD4-222ENST00000568034 IFIT1P09914 478 aaKnown RBP22.21■■□□□ 1.15
COMMD4-222ENST00000568034 GYG1P46976 350 aa22.21■■□□□ 1.15
COMMD4-222ENST00000568034 TIMM10P62072 90 aa22.21■■□□□ 1.15
COMMD4-222ENST00000568034 NIM1KQ8IY84 436 aa22.21■■□□□ 1.15
COMMD4-222ENST00000568034 AKAP2Q9Y2D5 859 aa22.21■■□□□ 1.15
COMMD4-222ENST00000568034 ZC3H4Q9UPT8 1303 aaKnown RBP22.21■■□□□ 1.15
COMMD4-222ENST00000568034 ZNF646O15015 1829 aaPredicted RBP22.2■■□□□ 1.14
COMMD4-222ENST00000568034 FBXO33Q7Z6M2 555 aa22.2■■□□□ 1.14
COMMD4-222ENST00000568034 EAF2Q96CJ1 260 aaPredicted RBP22.2■■□□□ 1.14
COMMD4-222ENST00000568034 COA1Q9GZY4 146 aa22.2■■□□□ 1.14
COMMD4-222ENST00000568034 IL1RAPL2Q9NP60 686 aa22.2■■□□□ 1.14
COMMD4-222ENST00000568034 ZNF541Q9H0D2 1346 aa22.2■■□□□ 1.14
COMMD4-222ENST00000568034 SMC5Q8IY18 1101 aa22.19■■□□□ 1.14
COMMD4-222ENST00000568034 JDP2Q8WYK2 163 aa22.19■■□□□ 1.14
COMMD4-222ENST00000568034 XAGE2Q96GT9 111 aa22.19■■□□□ 1.14
COMMD4-222ENST00000568034 RWDD1Q9H446 243 aaPredicted RBP22.19■■□□□ 1.14
COMMD4-222ENST00000568034 CD209Q9NNX6 404 aa22.19■■□□□ 1.14
COMMD4-222ENST00000568034 ZNRF3Q9ULT6 936 aa22.19■■□□□ 1.14
COMMD4-222ENST00000568034 PSME4Q14997 1843 aa22.18■■□□□ 1.14
COMMD4-222ENST00000568034 SMARCA5O60264 1052 aaPredicted RBP22.18■■□□□ 1.14
COMMD4-222ENST00000568034 IL1R1P14778 569 aa22.18■■□□□ 1.14
COMMD4-222ENST00000568034 BCAMP50895 628 aa22.18■■□□□ 1.14
COMMD4-222ENST00000568034 KCNQ5Q9NR82 932 aa22.18■■□□□ 1.14
COMMD4-222ENST00000568034 TLR7Q9NYK1 1049 aaKnown RBP22.18■■□□□ 1.14
COMMD4-222ENST00000568034 HIBADHP31937 336 aaKnown RBP22.17■■□□□ 1.14
COMMD4-222ENST00000568034 ZNF804AQ7Z570 1209 aa22.17■■□□□ 1.14
COMMD4-222ENST00000568034 PODNQ7Z5L7 613 aa22.17■■□□□ 1.14
COMMD4-222ENST00000568034 GCC1Q96CN9 775 aa22.17■■□□□ 1.14
COMMD4-222ENST00000568034 DBNDD2Q9BQY9 259 aa22.17■■□□□ 1.14
COMMD4-222ENST00000568034 LRRCC1Q9C099 1032 aa22.17■■□□□ 1.14
COMMD4-222ENST00000568034 DBNLQ9UJU6 430 aaKnown RBP22.17■■□□□ 1.14
COMMD4-222ENST00000568034 PHKA1P46020 1223 aa22.16■■□□□ 1.14
COMMD4-222ENST00000568034 TDRD7Q8NHU6 1098 aaKnown RBP22.16■■□□□ 1.14
COMMD4-222ENST00000568034 NEUROD6Q96NK8 337 aa22.16■■□□□ 1.14
COMMD4-222ENST00000568034 COL1A1P02452 1464 aaPredicted RBP22.15■■□□□ 1.14
COMMD4-222ENST00000568034 CXCL9Q07325 125 aa22.15■■□□□ 1.14
COMMD4-222ENST00000568034 CCDC102BQ68D86 513 aa22.15■■□□□ 1.14
COMMD4-222ENST00000568034 AACSQ86V21 672 aa22.15■■□□□ 1.14
COMMD4-222ENST00000568034 CCDC8Q9H0W5 538 aaPredicted RBP22.15■■□□□ 1.14
COMMD4-222ENST00000568034 ZBTB22O15209 634 aa22.14■■□□□ 1.13
COMMD4-222ENST00000568034 CAVIN4Q5BKX8 364 aa22.14■■□□□ 1.13
COMMD4-222ENST00000568034 CLASRPQ8N2M8 674 aaKnown RBP22.14■■□□□ 1.13
COMMD4-222ENST00000568034 G3V3G9 751 aa22.13■■□□□ 1.13
COMMD4-222ENST00000568034 RAD17O75943 681 aa22.13■■□□□ 1.13
COMMD4-222ENST00000568034 EIF6P56537 245 aaKnown RBP22.13■■□□□ 1.13
COMMD4-222ENST00000568034 DCAF8Q5TAQ9 597 aa22.13■■□□□ 1.13
COMMD4-222ENST00000568034 KDM2BQ8NHM5 1336 aa22.12■■□□□ 1.13
COMMD4-222ENST00000568034 PSMD14O00487 310 aa22.12■■□□□ 1.13
COMMD4-222ENST00000568034 CIAPIN1Q6FI81 312 aa22.12■■□□□ 1.13
COMMD4-222ENST00000568034 IQSEC3Q9UPP2 1182 aaPredicted RBP22.12■■□□□ 1.13
COMMD4-222ENST00000568034 ERICH6BQ5W0A0 696 aa22.11■■□□□ 1.13
COMMD4-222ENST00000568034 VPS37DQ86XT2 251 aa22.11■■□□□ 1.13
COMMD4-222ENST00000568034 FAM205AQ6ZU69 1335 aa22.1■■□□□ 1.13
COMMD4-222ENST00000568034 GLTPD2A6NH11 291 aa22.1■■□□□ 1.13
COMMD4-222ENST00000568034 DDNO94850 711 aaPredicted RBP22.1■■□□□ 1.13
COMMD4-222ENST00000568034 VIL1P09327 827 aaKnown RBP22.1■■□□□ 1.13
COMMD4-222ENST00000568034 ARID4AP29374 1257 aaPredicted RBP22.1■■□□□ 1.13
COMMD4-222ENST00000568034 DACT2Q5SW24 774 aa22.1■■□□□ 1.13
COMMD4-222ENST00000568034 ANKRD45Q5TZF3 282 aa22.1■■□□□ 1.13
COMMD4-222ENST00000568034 MYH13Q9UKX3 1938 aa22.1■■□□□ 1.13
COMMD4-222ENST00000568034 USP17L3A6NCW0 530 aa22.09■■□□□ 1.13
COMMD4-222ENST00000568034 USP17L4A6NCW7 530 aa22.09■■□□□ 1.13
COMMD4-222ENST00000568034 GTF2IP78347 998 aa22.09■■□□□ 1.13
COMMD4-222ENST00000568034 RASGRF1Q13972 1273 aa22.09■■□□□ 1.13
COMMD4-222ENST00000568034 SCARF1Q14162 830 aa22.09■■□□□ 1.13
COMMD4-222ENST00000568034 STRIP1Q5VSL9 837 aa22.09■■□□□ 1.13
COMMD4-222ENST00000568034 USP17L1Q7RTZ2 530 aa22.09■■□□□ 1.13
COMMD4-222ENST00000568034 GPC2Q8N158 579 aa22.09■■□□□ 1.13
COMMD4-222ENST00000568034 JAG2Q9Y219 1238 aa22.09■■□□□ 1.13
COMMD4-222ENST00000568034 AKAP11Q9UKA4 1901 aa22.08■■□□□ 1.13
COMMD4-222ENST00000568034 IFIT2P09913 472 aaKnown RBP22.08■■□□□ 1.13
COMMD4-222ENST00000568034 NUCB1Q02818 461 aa22.08■■□□□ 1.13
COMMD4-222ENST00000568034 TTLL5Q6EMB2 1281 aa22.08■■□□□ 1.13
COMMD4-222ENST00000568034 B4GALNT3Q6L9W6 998 aa22.08■■□□□ 1.13
COMMD4-222ENST00000568034 C16orf71Q8IYS4 520 aaPredicted RBP22.08■■□□□ 1.13
COMMD4-222ENST00000568034 OTUD7AQ8TE49 926 aaPredicted RBP22.08■■□□□ 1.13
COMMD4-222ENST00000568034 MXD3Q9BW11 206 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms